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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0323100 |
| Transcript ID | LotjaGi3g1v0323100.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | NBS-LRR type disease resistance protein; TAIR: AT3G14470.1 NB-ARC domain-containing disease resistance protein; Swiss-Prot: sp|Q7XA42|RGA1_SOLBU Putative disease resistance protein RGA1; TrEMBL-Plants: tr|G7K728|G7K728_MEDTR Disease resistance protein RGA4; Found in the gene: LotjaGi3g1v0323100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:68818550..68824155) extracted from Lotus japonicus Gifu genome v1.2.
TTCAAAGTTCCAACTAATAGACTTCTAACACAACACGTTGCTAACTTTGGACTATTCAATGCCAAGTTGGGTGACTTTGG TCTTTTCAGCCTTCATGGTTGGAATCCAATGTCACTCGTAGCTACCTTGAAGTTTCCTTGGATTTAACTAGCTATTTGCA GACTTTTGCAAACACTATCCACACTTCGCTTCAGAGATCATTCAAGCAAAACCAGTCTCTAATCTTCATCCCTTTCCAAC TTTTGCATTTCTGAAAATGACTGAGGCCTTACTTGGAGCTGTGTTTGAGAAATTGATCTCTCTAGCTCAGAATGAATTCG CAACCATGTCTGGAATCAACAGAAAGGCTGAGAAACTATCACACACTCTTGAACTGATCAAGGCTGTTGTTGAAGATGCT GAGGAGAAACAAATAACAAACAAACCTATAAAGGTTTGGCTGCAGCAGCTCAAAGATGCTACGTACGTCCTAGATGATAT ACTTGATGAATGTTCCATAGATTCACTTCGTCTTAAAGGATTGTCCTCTTTAAAACCACAGAACATCAAGTTTCGCTATG AGATTGGCAACAAGATGAAAGAGATTTCAAGCAGATTTGATGAGATTGCTAACCAGAAGAACAAGTTTGTTCTGCAAGAG GGTGTTAGGGAAAGGTCAACTGAAGTTGCTGAATGGCGCCAAACCAGGTCGTTCATTCCCCAAGCTAAACTATATGGAAG AGAAGATGATAAGGAGAAGATTCTGGAGTTTCTTCTAAGCCAAGCACGTGACTCTGGCTTCCTTTCCATCTATTCCATTG TTGGCTTAGGTGGCATTGGAAAAACAACACTTGTTCAAATGGTCTACAATGATGATCAGGTAACAAGCAATTTTGACATC AAAGTTTGGATTTGTGTTTCTGAAAATTTCTCTGTCCAGAGGATTTTGTGCTCTATCATAGAATCTATTACAGAAGCAAA ACATGAGTGCTTGAATTTAGATGTTACAGAAAGAAAGGTGCAACAACTATTGCAAAGTAAAAGATATTTGCTGGTTTTGG ATGACGTGTGGAGAAAAAATGAAGAAATGGAATTTGGTTTAACCCAAGACAAATGGAATAAGCTGAAATGTCTGTTGTCA TGTGCATCCAAAGGATCTTCCATTTTAGTATCCACTCGCGATATGGAGGTTGCAGCAATCATGGGAACATGTCAAGCTCA TCATTTGTGCGGTCTCTCTGAGGATGAATGTTGGATGTTGTTCAAACAATATGCATTTGGAACTGAAAAAGAAGAGCGTA TAGAGCTTGTAGCTATAGGCAAAGAGATAGTAAAGAAGTGTGGAGGATCACCTCTTGCAGCACAAGCATTAGGAGGTCTC TTGCACTCAAGAATTGGGGAAAAAGAATGGCTTGAAGTTATGGAAAGTGAGCTTTGGAATTTAGCGGGTGAAAATTCTAT TTTGGCTGCCTTGAGATTGAGCTACATTCATTTAACACCAACATTAAGGCAGTGTTTTGCATTTTGTGCCCTGTTTCCTA AAGATACAGAAATCATGAAGGAAGATTTGATTCATCTTTGGATGGCTAATGGGTTTATTGCATCCAGGGAAAACTTGGAG GTTGAAGATGTCGGCAATATGATTTGGAATGAATTGTATCAAAAATCATTCTTTCAAGATATGAGGTTGGTTGATTATTC AGGTGATATTCATTTCAAGATGCATGATCTTGTTCATGATCTTGCTCAATCAATAATGGGGCAAGAGTGCATGGTTTTGG GCAATGCAAACATGACAGGTTTGTCAAGAAGCACCCACCATGTTAGTTATGACTCTGGTTGGGATGCATCGTCGCTCCAC AAGTGTGCCTTCAAGAAAGTTGAGTCCATGCGAACATTTTATCAGTTAAAACCCTACAACAAAAGAGTTTCAGTTTCTGG TTGTATCCTAACACCCTGCAGCACTCTTCGGGTATTACGCACAAGTTCTTTCGATTTATCACCACTCAAGAGTTTAAATC ATTTGAGATATTTGGAACTTTTCAAGCTTCGGATAGAAACCTTGCCCGACTCAATTTATAGCTTGCGGAAATTGGAAATC TTGAAATTGAGATTTTTGAAAAATCTTATTTGTCTACCTAAAGACTTGACTTGCTTACAGGATCTTAGACATCTTGTCAT TGAAGGTTGTGATTCATTGTCTTGTATGTTCCCTAACATTGGAAAATTATCCCATTTGAGAACGTTGAGTAAGTACATTG TCCATTCAGAGATAGGACATACCATGGCAGAATTACATGATTTAAAACTCAGAGGAGATTTGCGCATTGAAGGACTAGAA AATGTTGGCAATTCATCTGAAGCTCAAGAGGCCAATCTGATGGGTAAAAAAAACCTCCACAAATTACAGTTGATATGTGA CAAGCAGGTCCAGACAAAGCCATATGCTACTAATCCCGAGGTAGTACTTAATGCGCTTCAACCTCACTCAAATCTCAAGA ATATGAAAATAGAATACTATGCAGGATTACAATTCCCGAGCTGGATGGAAATGCTCACCAATTTAGTTTCTCTTAAGCTT AATGAATGCAAGAAGTGTGTGAAGCTTCCCTCACTTGGTAAACTGCCATATTTAAGAAGAATTAAAATAAGCAAATTGTA TGATGTGCAGTACATGGATGATGACGAATCTTACGATGGTGTGGAGGTGAAAGCTTTCCCGTCATTAGAAAAACTTTCAT TATATTCGTGCCCAAAGTTAGAGCCGTTGTTGAAAGTGGAAACTGGAGAGAATTTCCCCTGTCTTTCTAGTTTGGACATT CAAACTTGCCCTAAACTTGAGTTGCCATGCTGCATTCCATCCCTTAAAAGCCTCGAGGTAGTTCTTTATTCCAATGAGTT CCTAAGGTCACTCTCGTGTTTCAGTGGTCTTACCTCCCTAAGCCTTCACCATGGGAATGTAGACCTGACATCCTTCCCGA TGGGGAAATTGACATGTCTTCAGACTCTGGAGATAACTTGTTCCAAGTTATTGAAGGAATTACCAAATGAACTCTTCAAA AACCTCAACACTTTGGAGCATCTGATAATCCTTTTGTGTGAAGATTTGGAGTCTTTACCAGAGAAAGGTTGGGAAGGCCT CCACTCCCTTCGAACTGTGGAGCTTTGGGGCTGTTGGGAATTGAAATCCTTGCCGGATGGTGTTCGACACCTCACTTCAC TCGAGCTTTTGACAATTCAGAACTGCCCAGCATTAGCCAAGAGGTGTAAAGAGGGAACAGGGGAGGACTGGGACAAGATA GCGCACGTTCCCAAAGTAGAAATTATTGTAGATGAGGATTGGAACAAGATAGGTGCTTCCAATTCGGTAAGCTCTCTCAT CCCGCTGCAGCTTTTTCTATTACCTTTCTCATTGGGTAGTAAGTACTAATACATATATCTTGTGCGTTTTTGCAGGCATG ATTCTTGACTCTTTACCAAGTGAGTATTCTGATCCCATGTTGAAATGGTTTTTGGTAATTTCCAATTATCAGACTGTGTT GTAATTTTGCCTAATGGAGGACAACTTCAGCACCAATTTGATCTTTACTTTGGAGACTGGATTCACTGGCAAGCTAGCAA GAGCATGGTTCAAGATAGTTGACCAGCTCCGAATCGAGGTGTGTGATAAATATTACAATCGTCTATAATAATTATTTGTC TTTTACTGTTTTCAATTTTGGACTGTGTGTGGGTTTGATGAATATGGTATGTCCCGTTACAAAAAATTTGCTAAATTTAT GTGAAACTTGAATTATTTTGATTGATGATGTTTGTTGTTGGAACTGCAAATTTTTGAGGTTTTGTAGGTTAAGTAGTGTA GGAAACTTTGATGATTTGAGTGGGTGTGCTCTTTATTCATGCTTTATGTGTCGTGTAATGTTAATACATGATGTGTAAGA CATTTATCTGAAGTGCAAAACCACAATGAATTGGTTTGCTTTGCTTTGCTTACAGTGTGGTAGTGTATGTTGTTTGCGTA GTTCGTATGAATAGATTGAAAATTGATGATGTATATTGATCTGTCGCAACTCATTGATTTGTTGATGTATATTTGAACTT GAATTTAAACTTTCTGAATGTTGCCGCACATTTTGCTTTATTTTTATCAATGATGTAGTTTTGCTGGTTTTTGGTGTTGG CTATCAATACATTGGGGGAGTTGTGTGAGTTCACTAGCTTGGTTCTGCAGGAAACTCTACTGGTTCAAATGCTAAGTGTA CTTTATGTTGTGTGCTTTTTATTAATTAAACTTCAGCATAGCTTTCATGCTCCTACTGCAATTATTACTTTTAAGAAAAA TGCTAAGAATACTCTTTTTAACAATGAAATTCTAACACACTTAATAATTAGATAAAAAAATTAATCAATAAATGAGAGTG TTGAAAAGAGAATGAGCGATAGTAGCACTCCTCTTATTCTAAAAATATGAGTTTCACTTCCAATTTATTCAATATGTAAT TTTTCATTGGTTGTGCTTAAAAGTGAGGTGTTGGGTTTGTGCTTAATTACTCTAACTCTGGTTAGAATTTTTTTGGAGTG GAGTGTATATTTTGAGAAAAAAACGGTGTAGTGTCTAACAAACCTGAAGGGTGGTTAGTGTATTTTACTTTATAAACTTT AACAGAGAGTATTGAAAAGAGAAGTTAAAGTCCGCACTCCTCTTATCGTCTCTAGTTGAATGATGAAACTCAATTCATAA TTGTTTATGATTTGAGTTTCACTTCTTGTTTTTAGTTTTGCTTACCACCTGATTGCTTTGATCTCCAAGTTTCGCAACCC TTAGTAAAGTTCAGTTCAGAGATGGTATTTAAAAATGGTGTTTCTTGATTTCAGGACACAAATAGTTCAATTCAACATCA AGCGAGCTTAGCGTGCTCATGCCTGCATATCTTGACTCCATCATCAAGAGTGATTCAATACTTAATATCTCATCAAGAAT GGCAAGAAGATTCGTGCTAATCATGATCGTGTCACTGGTTACCTCTAGTAAGCTACTATTATTTGATTAGTTCTCTAATA AAGCAATTCAAGTGAATTAGTGCTGGTGTATCAGATTCTTGTGTCGATCACTACACTAGCTAGTTGCTATTTGCTATGCT TTTTGCACTGTCTGTAATTCTGTATATTTAAACTGGATGGAACTTCCTCTTCTGGCAAGTGTACTTGTAGATTTGGTGTT GCTGTTGTCTCTTTCTTGATTATCGTTCATATATAGCATGATGCATCGCATCTGACTGATCCATGCCAAAATAAGGGAGT GATGAGAGTTAATATGACAAATAAAAATTAAGGGCAGAAGCTGAAAATATTTTTCACCAACAAATCAAGCTATTTGGCTA TGAAAAATGAAAAATCCAACCCTACTCTTGTGATTTCGTTCAATCTACACTTTTTGAGCCAACAACTTTGATCTCATCAT TGGCAGACAACTTGTAGTAATTTTTTTCTACAACATACCCTGTTTGGTTCAGTTCTTTTTAGTATCCCATTTAGCAGGCT CCTTTATTCCTTCTCATGTGTCCTTACATTGTGCCTCCTAATTTTCAACCGATAACATTTTCTACTCTCTTCAGCATAGA ATAGTG
CDS sequence (LotjaGi3g1v0323100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGACTGAGGCCTTACTTGGAGCTGTGTTTGAGAAATTGATCTCTCTAGCTCAGAATGAATTCGCAACCATGTCTGGAAT CAACAGAAAGGCTGAGAAACTATCACACACTCTTGAACTGATCAAGGCTGTTGTTGAAGATGCTGAGGAGAAACAAATAA CAAACAAACCTATAAAGGTTTGGCTGCAGCAGCTCAAAGATGCTACGTACGTCCTAGATGATATACTTGATGAATGTTCC ATAGATTCACTTCGTCTTAAAGGATTGTCCTCTTTAAAACCACAGAACATCAAGTTTCGCTATGAGATTGGCAACAAGAT GAAAGAGATTTCAAGCAGATTTGATGAGATTGCTAACCAGAAGAACAAGTTTGTTCTGCAAGAGGGTGTTAGGGAAAGGT CAACTGAAGTTGCTGAATGGCGCCAAACCAGGTCGTTCATTCCCCAAGCTAAACTATATGGAAGAGAAGATGATAAGGAG AAGATTCTGGAGTTTCTTCTAAGCCAAGCACGTGACTCTGGCTTCCTTTCCATCTATTCCATTGTTGGCTTAGGTGGCAT TGGAAAAACAACACTTGTTCAAATGGTCTACAATGATGATCAGGTAACAAGCAATTTTGACATCAAAGTTTGGATTTGTG TTTCTGAAAATTTCTCTGTCCAGAGGATTTTGTGCTCTATCATAGAATCTATTACAGAAGCAAAACATGAGTGCTTGAAT TTAGATGTTACAGAAAGAAAGGTGCAACAACTATTGCAAAGTAAAAGATATTTGCTGGTTTTGGATGACGTGTGGAGAAA AAATGAAGAAATGGAATTTGGTTTAACCCAAGACAAATGGAATAAGCTGAAATGTCTGTTGTCATGTGCATCCAAAGGAT CTTCCATTTTAGTATCCACTCGCGATATGGAGGTTGCAGCAATCATGGGAACATGTCAAGCTCATCATTTGTGCGGTCTC TCTGAGGATGAATGTTGGATGTTGTTCAAACAATATGCATTTGGAACTGAAAAAGAAGAGCGTATAGAGCTTGTAGCTAT AGGCAAAGAGATAGTAAAGAAGTGTGGAGGATCACCTCTTGCAGCACAAGCATTAGGAGGTCTCTTGCACTCAAGAATTG GGGAAAAAGAATGGCTTGAAGTTATGGAAAGTGAGCTTTGGAATTTAGCGGGTGAAAATTCTATTTTGGCTGCCTTGAGA TTGAGCTACATTCATTTAACACCAACATTAAGGCAGTGTTTTGCATTTTGTGCCCTGTTTCCTAAAGATACAGAAATCAT GAAGGAAGATTTGATTCATCTTTGGATGGCTAATGGGTTTATTGCATCCAGGGAAAACTTGGAGGTTGAAGATGTCGGCA ATATGATTTGGAATGAATTGTATCAAAAATCATTCTTTCAAGATATGAGGTTGGTTGATTATTCAGGTGATATTCATTTC AAGATGCATGATCTTGTTCATGATCTTGCTCAATCAATAATGGGGCAAGAGTGCATGGTTTTGGGCAATGCAAACATGAC AGGTTTGTCAAGAAGCACCCACCATGTTAGTTATGACTCTGGTTGGGATGCATCGTCGCTCCACAAGTGTGCCTTCAAGA AAGTTGAGTCCATGCGAACATTTTATCAGTTAAAACCCTACAACAAAAGAGTTTCAGTTTCTGGTTGTATCCTAACACCC TGCAGCACTCTTCGGGTATTACGCACAAGTTCTTTCGATTTATCACCACTCAAGAGTTTAAATCATTTGAGATATTTGGA ACTTTTCAAGCTTCGGATAGAAACCTTGCCCGACTCAATTTATAGCTTGCGGAAATTGGAAATCTTGAAATTGAGATTTT TGAAAAATCTTATTTGTCTACCTAAAGACTTGACTTGCTTACAGGATCTTAGACATCTTGTCATTGAAGGTTGTGATTCA TTGTCTTGTATGTTCCCTAACATTGGAAAATTATCCCATTTGAGAACGTTGAGTAAGTACATTGTCCATTCAGAGATAGG ACATACCATGGCAGAATTACATGATTTAAAACTCAGAGGAGATTTGCGCATTGAAGGACTAGAAAATGTTGGCAATTCAT CTGAAGCTCAAGAGGCCAATCTGATGGGTAAAAAAAACCTCCACAAATTACAGTTGATATGTGACAAGCAGGTCCAGACA AAGCCATATGCTACTAATCCCGAGGTAGTACTTAATGCGCTTCAACCTCACTCAAATCTCAAGAATATGAAAATAGAATA CTATGCAGGATTACAATTCCCGAGCTGGATGGAAATGCTCACCAATTTAGTTTCTCTTAAGCTTAATGAATGCAAGAAGT GTGTGAAGCTTCCCTCACTTGGTAAACTGCCATATTTAAGAAGAATTAAAATAAGCAAATTGTATGATGTGCAGTACATG GATGATGACGAATCTTACGATGGTGTGGAGGTGAAAGCTTTCCCGTCATTAGAAAAACTTTCATTATATTCGTGCCCAAA GTTAGAGCCGTTGTTGAAAGTGGAAACTGGAGAGAATTTCCCCTGTCTTTCTAGTTTGGACATTCAAACTTGCCCTAAAC TTGAGTTGCCATGCTGCATTCCATCCCTTAAAAGCCTCGAGGTAGTTCTTTATTCCAATGAGTTCCTAAGGTCACTCTCG TGTTTCAGTGGTCTTACCTCCCTAAGCCTTCACCATGGGAATGTAGACCTGACATCCTTCCCGATGGGGAAATTGACATG TCTTCAGACTCTGGAGATAACTTGTTCCAAGTTATTGAAGGAATTACCAAATGAACTCTTCAAAAACCTCAACACTTTGG AGCATCTGATAATCCTTTTGTGTGAAGATTTGGAGTCTTTACCAGAGAAAGGTTGGGAAGGCCTCCACTCCCTTCGAACT GTGGAGCTTTGGGGCTGTTGGGAATTGAAATCCTTGCCGGATGGTGTTCGACACCTCACTTCACTCGAGCTTTTGACAAT TCAGAACTGCCCAGCATTAGCCAAGAGGTGTAAAGAGGGAACAGGGGAGGACTGGGACAAGATAGCGCACGTTCCCAAAG TAGAAATTATTGTAGATGAGGATTGGAACAAGATAGGTGCTTCCAATTCGGCATGA
Protein sequence (LotjaGi3g1v0323100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MTEALLGAVFEKLISLAQNEFATMSGINRKAEKLSHTLELIKAVVEDAEEKQITNKPIKVWLQQLKDATYVLDDILDECS IDSLRLKGLSSLKPQNIKFRYEIGNKMKEISSRFDEIANQKNKFVLQEGVRERSTEVAEWRQTRSFIPQAKLYGREDDKE KILEFLLSQARDSGFLSIYSIVGLGGIGKTTLVQMVYNDDQVTSNFDIKVWICVSENFSVQRILCSIIESITEAKHECLN LDVTERKVQQLLQSKRYLLVLDDVWRKNEEMEFGLTQDKWNKLKCLLSCASKGSSILVSTRDMEVAAIMGTCQAHHLCGL SEDECWMLFKQYAFGTEKEERIELVAIGKEIVKKCGGSPLAAQALGGLLHSRIGEKEWLEVMESELWNLAGENSILAALR LSYIHLTPTLRQCFAFCALFPKDTEIMKEDLIHLWMANGFIASRENLEVEDVGNMIWNELYQKSFFQDMRLVDYSGDIHF KMHDLVHDLAQSIMGQECMVLGNANMTGLSRSTHHVSYDSGWDASSLHKCAFKKVESMRTFYQLKPYNKRVSVSGCILTP CSTLRVLRTSSFDLSPLKSLNHLRYLELFKLRIETLPDSIYSLRKLEILKLRFLKNLICLPKDLTCLQDLRHLVIEGCDS LSCMFPNIGKLSHLRTLSKYIVHSEIGHTMAELHDLKLRGDLRIEGLENVGNSSEAQEANLMGKKNLHKLQLICDKQVQT KPYATNPEVVLNALQPHSNLKNMKIEYYAGLQFPSWMEMLTNLVSLKLNECKKCVKLPSLGKLPYLRRIKISKLYDVQYM DDDESYDGVEVKAFPSLEKLSLYSCPKLEPLLKVETGENFPCLSSLDIQTCPKLELPCCIPSLKSLEVVLYSNEFLRSLS CFSGLTSLSLHHGNVDLTSFPMGKLTCLQTLEITCSKLLKELPNELFKNLNTLEHLIILLCEDLESLPEKGWEGLHSLRT VELWGCWELKSLPDGVRHLTSLELLTIQNCPALAKRCKEGTGEDWDKIAHVPKVEIIVDEDWNKIGASNSA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | 6 | 101 | 96 | 3.2E-23 | ||
| CDD | 11 | 119 | 109 | 9.4372E-12 | ||
| PANTHER | 30 | 994 | 965 | 1.3E-170 | – | |
| PANTHER | 30 | 994 | 965 | 1.3E-170 | – | |
| Coils | 31 | 51 | 21 | - | – | |
| Gene3D | 136 | 314 | 179 | 1.0E-35 | – | |
| SUPERFAMILY | 138 | 417 | 280 | 9.43E-68 | ||
| Pfam | 155 | 383 | 229 | 3.7E-52 | ||
| PRINTS | 178 | 193 | 16 | 3.5E-18 | – | |
| PRINTS | 251 | 265 | 15 | 3.5E-18 | – | |
| PRINTS | 355 | 369 | 15 | 3.5E-18 | – | |
| SUPERFAMILY | 481 | 889 | 409 | 2.04E-28 | – | |
| Gene3D | 525 | 665 | 141 | 4.4E-13 | ||
| Gene3D | 666 | 875 | 210 | 1.8E-20 | ||
| SUPERFAMILY | 870 | 991 | 122 | 5.78E-11 | – | |
| Gene3D | 876 | 996 | 121 | 4.2E-13 | ||
| PRINTS | 977 | 993 | 17 | 3.5E-18 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ADP binding | Interacting selectively and non-covalently with ADP, adenosine 5'-diphosphate. |
Expression pattern of LotjaGi3g1v0323100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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