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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0323400 |
| Transcript ID | LotjaGi3g1v0323400.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Kinase family protein; TAIR: AT2G05940.1 Protein kinase superfamily protein; Swiss-Prot: sp|Q9ZUF4|RIPK_ARATH Serine/threonine-protein kinase RIPK; TrEMBL-Plants: tr|I1KHC5|I1KHC5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0323400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:68892757..68894664) extracted from Lotus japonicus Gifu genome v1.2.
AAAAAATTACCTCAAAACTTTGAATCCTTGGTCTTGTAACCTATAAAAGCTGAGCTTTCTAAACTGATTCTTCAGATACT GATAAAGCTTTCGAAACTACTCATATCAGAAAAATGCCCTCAATGAAACTTCAATGGAGATCCTTGGTACCTGGCTGTTT TATGGACAAGCACTCATCCTTGGAAACCCCAAACATAGTTTCCAAAAAGACATCTTCTAGGAGAGTCTCCCTCTCTGATG TGAGTGATTTATCAGATTATTCATTACTCTCCATCATGAGTGATTTATCCAACTCTCTAGTGGGATCAAATCTTCATATT TTCACTTACCAGGAGCTCACAGAGATTACACACAACTTCAGCAAATCCAACTTTCTTGGGGAAGGTGGGTTTGGGAAGGT ATATAAAGGGTTTATTGATGACAAGCTTAAGCCTACACTTGTTGCTCAGACAGTAGCAGTTAAGGCCTTAAACCTGGATG GAAATCAAGGCCACAGGGAGTGGTTGGTGAGCATTACTACTACCCATATTGTTCTGTATTTTTCCAGTGATGACATTGTC TAATGTTTTTTACACTGCACAGGCTGAAGTCATCTTTCTGGGGCAGTTGAAGCATTGTCATCTGGTCAATTTAATTGGCT ACTGCTGTGAAGATGAGCACTGGCTTCTTGTGTATGAATACATGGAGCGAGGCAATCTAGAGGAAAAGCTTTTCAAAGGT GCATGCATGTTTTTCTCCAAATTGTCTCTCATTATGAAAGAAAAACGAAACAAAAGCCAAACTTTCTTACAAAAGACTGT TATCATTCCAAAATGCAGGTTATTTAGCAACCTTGCCTTGGCTAACAAGAATCAAAATAGCAATTGGGGCTGCAAAAGGA CTTGCTTTCCTTCATGAAGAAGAGAAGCCAGTCATATACAGAGATGTTAAAGCCTCAAACATTCTTTTGGATGTTGTAAG TCCTCAGTCATTAACTACCCTTTGTTTCCTCAATCTAAACAATGAGCATTATCTGCAAATTAATTAAAAACAACACAAAC TAACATGTTTATACTCTTTGTGTTTCTTTCAGGATCACAATGCCAAGCTCTCAGATTTTGGTTTAGCAATAGATGGACCA GATAAAGATCATTCATACATTACAACTAGTGTGATGGGTACCCATGGTTATGCTGCTCCTGAGTATATCATGACTGGTAT TCATTCTTCTCAAAATTAACCAAATTCAAAACAACCCCTTTAGCGCAAAAAAATTATTCTAGAAAACAAGTTCTTCAATT AACTCAATATACCTTGTCTTTCCTCCTTAATTAGGCCGTTTGACAACCATGAGCGATGTGTATAGCTTTGGAGTTGTTCT TTTGGAGCTTCTCACAGGAAGAAGATCTGTGGACATGAAACGAGCCACCAGAGAAAAAGATTTGGTGGAATGGGCTAGGC CTCTATTGAAAGATTACCATAAACTTGAAAGAATAATGGATCCAAGGCTTGAGGATCAGTACTCAACTGAAGGGGCTAGA AAGGTAGCAGCTCTGGCTTATCAATGTCTAAGCCATCATGACAAGAGCAGGCCCACCATGCGAACCGTGGTTAAGAGCTT AGACCCTCTGATGAAACTGAATGATATCCCAGTTGGCCATTTTGTTTATGTGGTTCCGAGTGAAGAATATTCACTCAAAC TAGCAGAAAATGACTGTGATGAAATCAAAGCTAAAGAAGAAGAGAAAAAGGAGAAAGGTCACAACAACCGGCACCGAAAC AGCCGGGGTAATAGACGCCGGGTAAATAGCATCATTGAGGAATGAAATTCTCGGTGATGCACTACATGTAGAATTTTTTG TAACATTACTCAAAGCTTGTCAATATTTTCACCAGGGAAAACTGATGGCTGTATTTTTATAAGCTAAG
CDS sequence (LotjaGi3g1v0323400.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCCCTCAATGAAACTTCAATGGAGATCCTTGGTACCTGGCTGTTTTATGGACAAGCACTCATCCTTGGAAACCCCAAA CATAGTTTCCAAAAAGACATCTTCTAGGAGAGTCTCCCTCTCTGATGTGAGTGATTTATCAGATTATTCATTACTCTCCA TCATGAGTGATTTATCCAACTCTCTAGTGGGATCAAATCTTCATATTTTCACTTACCAGGAGCTCACAGAGATTACACAC AACTTCAGCAAATCCAACTTTCTTGGGGAAGGTGGGTTTGGGAAGGTATATAAAGGGTTTATTGATGACAAGCTTAAGCC TACACTTGTTGCTCAGACAGTAGCAGTTAAGGCCTTAAACCTGGATGGAAATCAAGGCCACAGGGAGTGGTTGGCTGAAG TCATCTTTCTGGGGCAGTTGAAGCATTGTCATCTGGTCAATTTAATTGGCTACTGCTGTGAAGATGAGCACTGGCTTCTT GTGTATGAATACATGGAGCGAGGCAATCTAGAGGAAAAGCTTTTCAAAGGTTATTTAGCAACCTTGCCTTGGCTAACAAG AATCAAAATAGCAATTGGGGCTGCAAAAGGACTTGCTTTCCTTCATGAAGAAGAGAAGCCAGTCATATACAGAGATGTTA AAGCCTCAAACATTCTTTTGGATGTTGATCACAATGCCAAGCTCTCAGATTTTGGTTTAGCAATAGATGGACCAGATAAA GATCATTCATACATTACAACTAGTGTGATGGGTACCCATGGTTATGCTGCTCCTGAGTATATCATGACTGGTATTCATTC TTCTCAAAATTAA
Protein sequence (LotjaGi3g1v0323400.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MPSMKLQWRSLVPGCFMDKHSSLETPNIVSKKTSSRRVSLSDVSDLSDYSLLSIMSDLSNSLVGSNLHIFTYQELTEITH NFSKSNFLGEGGFGKVYKGFIDDKLKPTLVAQTVAVKALNLDGNQGHREWLAEVIFLGQLKHCHLVNLIGYCCEDEHWLL VYEYMERGNLEEKLFKGYLATLPWLTRIKIAIGAAKGLAFLHEEEKPVIYRDVKASNILLDVDHNAKLSDFGLAIDGPDK DHSYITTSVMGTHGYAAPEYIMTGIHSSQN
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 6 | 266 | 261 | 6.9E-128 | – | |
| PANTHER | 6 | 266 | 261 | 6.9E-128 | – | |
| Gene3D | 48 | 164 | 117 | 1.1E-32 | – | |
| SUPERFAMILY | 57 | 265 | 209 | 8.9E-60 | ||
| SMART | 82 | 269 | 188 | 6.9E-9 | ||
| ProSiteProfiles | 82 | 270 | 189 | 30.223 | ||
| Pfam | 85 | 268 | 184 | 2.2E-34 | ||
| ProSitePatterns | 88 | 117 | 30 | - | ||
| Gene3D | 165 | 270 | 106 | 1.2E-28 | – | |
| ProSitePatterns | 208 | 220 | 13 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi3g1v0323400.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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