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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0325700 |
| Transcript ID | LotjaGi3g1v0325700.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Protein kinase-like; TAIR: AT1G11390.1 Protein kinase superfamily protein; Swiss-Prot: sp|Q55G83|ABKC_DICDI Probable serine/threonine-protein kinase abkC; TrEMBL-Plants: tr|I1LSK9|I1LSK9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0325700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:69318058..69324188) extracted from Lotus japonicus Gifu genome v1.2.
CCCAAACTGAATCAAGAGAAACTGCATACCGACAAGGTGACTCACTCACTACCTGCGGTGTCTCCGACACAAGCTCATGT CAACGCCACCGTGTGCAGCCTAGGACGAGGATGTTGTGTGCAACATTCGACCTCACCCTCACAAAATCCACGCCACCATG TCAAGGTTCATGTCTTGCCTTTCAATTATACCCACCCTGTCTCTCAATTTTGAGCTCAGTTATCTTATAAATCACAACAT GCATGTTTTTCATTCATTCATTTTGAACATCCATGTTGTTTATGTTTTTCTTTTTTTTTTTGAATTTTTTGTGATTCTTC AATCCTAGTAGAAAGACCCTTAACTTCAAAATGAGTTATCTCTGTTTCACTAGTGTTATAACATGTTTACATGGACCTAA ATAAAATGGTAGCAGAACAAGAAAGAAACTTTGCTATAGAAATTTCCCGTTCTGCTCAAAACCGAATTACATTGATAGCT GAGCTAAAGGTTTGTGGGGCTTTGTTTGTATACATTGTTTCATAGAGTTATGATTATTTTAAATTTGTTTTTGTGTAGAG CTTTCAGCTATTGCATATTTACATTCTTCGTTTTCCTTAGCTTCGTTGAGTTTAAGCATGTGAAGTGTATTGATAGAATC TAATGTGCAGGCTTCTTGCTTGTGGAAATGTTAAAAGGTTTGCACGTGCTGTTCATAAGAAACATAACACTAGCTGTGTG GAAGTATTTTATCCTATGGGGGTCCCTTACTCAACATACAAACTTTTCTCATACTTTGGAGTTGCACACAAAGGGCAAAC TCCATTTGTGTTATTTAAATCGAAGGTTAACTTGCTGATGAATGGCAAAGCGAGGAACTTGTATACCATCACTACAAATA ATGCAAGATATCATCATCATGCTCAAGTTTTTTGGAACAGGGTGTGTTTCAATAAAGGGACAGTTCCACCTCAAATAGGT CAAATTGCCCGTGCTGTAAGTCTGGCGATGATGAAATCAAATTTTGTTGTCCATGGTATGATTGCTTTCGTGATAGGAGA GCTTGCTTGGTCACGAGGGGAATTAGCCGAAGCACAATCCTTCCCAACAAGGGATTCACTGTACCTTCAAGCACAAGATA AGCGTGTGTATTTGACCTCAGCTCTCTTGGGAGTTCTTGAGATTTTAATCTTGTTTCTCAGGGCTGTCTATTTGGTAATT TTGTTCTCTCCTTGCATCGCTATGGCTCCTTTGGTTGACTATTTTGGCATTCAATTTAGGAAAACATGGATTCATTTTGT ACGCCTTACTCTTGAAAAGGCTGGCCCAGCATTCATTAAATGGGGTCAATGGGCTGCAACCAGACCTGATCTCTTTCCTA GGGATCTCTGTGGCGAACTTGCGGAATTTCAAACCAAAGCACCAGCACATAAATTTAGCTATAGCAAAAAAAGTATTGAA AATGCATTTGGTCGCAAATTGACTGAAATATTTGAAAATTTTGAGGAGGAACCAGTAGCTTCGGGTAGCATTGCTCAAGT TCATCGAGCTATACTGAAATACAAATACCCTGGTCGGCAAATCAAGCCTGTTCTTGTAGCAGTGAAGGTCCGACATCCAG GAGTGTCCGAAGCAATTAGAAGGGATTTCATCATTATCAATCTTGTCGCCAAGATTTCATCTTTCATCCCTAATTTGAGG TGGTTGAGATTAGATGAAAGCATACAGCAGTTTGCTGTTTTTATGATGTCTCAAGTTGATCTTTCAAGGGAAGCGGCATA TCTTAGTCGTTTTATCTATAATTTCCGGAAATGGAAAGATGTTTCATTCCCAATGCCTCTGTATCCCCTTGTGCATCCTT CTGTTTTGGTGGAAACCTATGAACATGGTCAAAACGTGTTGCACTTTGTTGAAGAGCTTGAAGGACATGAGCATATCAAA AGTGCCCTAGCTCATATTGGAACACATGCTCTTTTAAAGATGCTTTTGGTAAAATATTATGAATTTTCTTGCAATTTTTT AGTTTTCTGTAACAACATATTATTCCCTAGCTCATATTGTAACTTTGTAGATTTTGTATTGATCAGATTCTGTTGATAGT TTTATCTAGTTCATGAAAGTATTAAATGCTAAAATGTTATTGGACCTATCATTTGTGTAAGTCTAAACACTTTACACAAT ATATTATGCATCATCTTCAAGACAATATGGTGAAAGATTGTCATTTTTTTTTTAAAAAAAAAAGTGGATATTTTGTTCTG CATCTCTAAAACTGGTGTACATTTTAGGATGCTAATATGTACAGTTGATTAAGTTAGTTAGTTAGCCTCTCAGACTTTCT GTTAGAATTAGTTACAGTTAGTAACCGATCCAACAGAATCAGTTACTGTTTTCACTGTATACCTCTCTCTCTCTCTCACC TCTCTTTCTCTTGAATATTAAGGGCCTGTTTGGTTGGCAAGATAATGAGAGTAGGATACACATGTAAGGGGAGTAATATA AGGAGAGTGGAGTAGGATATTTTATTCATTTAGCATTCTCCAGCTTTTTAGCTGGGGCAGAGAGTGCAACATCTCTCTCA GGAGCTTAGATCTGGGATTGGAGGGGGACTATCACGAAGATTCTTGATCTTCATTTGATGTTATTACTATTTATCTTAAA TGCATGTGATAGAGCAACCTAGAGATCCAGAATGATTCTCCCTTTTCCATCTTGGTAAATTGAACTTGCTAATATGTTAT TGTAAGGACAACTAGGCATTTGAGTGAAATAATTGGTTTCCTTAACTCAAATACACCTCTTTTTCCAGGTTGATAATTTT GTCCATGCAGACTTGCATCCTGGAAATATTCTTGTCCGTGTAGTGAAAAGGAAATCACCGCCTATGCAGCTCTTTAAGTC AAGGCCCCATGTCGTTTTCCTTGATGTTGGCATGACTACTGAACTTTCTAAGGGGGAACGAGAATATTTACTGGAATTCT TTAAGGCTGTTGCACTTCAAGATGGCCGCACTGCTGCAGAATGCACCCTTAGATTATCAAAACGACAAAATTGCCCTGAC CCAAAATCATTCATTGAGGTAAAGAATAATTATTATATGGTTTCCATGCATGGTTTGTATTAGCATCCTGATAACTTATC AACACAAACTGCAATTGTGCATTTACATTTTGACATTTTTATCAGTTACTTAAAATCCTGTATCTGAAATTCAGCTATTC ATTTGACCTCTGATCACCAGTTGTGAGTTAAAGGTCCTTAATTGATTGGTGTTTCGATGTTTTGGTCATTTGTTGTTTTC CCATAGTTCTGACAAGTTATTAGGATCATGAATTTGCAACATCAGAAAACTTAAGGTCGAACTCTTTCTTTGGGGATTGC ATGCGCTTCTGAATTCGAAAAAAAAAATAGTATTAATTAATTGGATGTCCTTAGTCTGTGTCAGCCAGTGTAAGTCTAAA CACTTTACACAATATATTATGCATCCTCTTCAAGACAATATGGTGAAAGATTGTGATTTTAAAAAACATTTTGGATATTC TGTTCTGCATCTCTAAAACTGATGTACATTTTACAATTGGTAATATTGTATGGTGTTTCAGTATATACATTTTCCTGAGT AAATATTTTTACCATTTAACAGGAAGTGGATAATTCTTTCAAGTTTTGGAGGTCCTCAGAAGGTGAATCTGTCCACACAG CTGACCGAATGCAACAGTTGCTTGAGCATGTTAGGCGGTGCAAAGTCAACATAGATGGCAATATCTGTGCTGTCATAGTG ACAACATTGGTTCTGGAGGTAAGTTCTGTTCTAAATCACCCTTTTTATCAAATTATTCTCTGTAGCTTTATAATGAGGTG AATATTATTATAGTAGAAAGAAATCTAACTGTGTATATTATCTTGAATTGATATAATGTGTCTAGTGAGGTCCTATATGT TAGAATTCATAAGTTAAGGCAATAGGTTTCTGTGCCCTATATGTGATTGACTATTGTACACTTGCTAATCTATCCAATGT GGGACTTATTTGAGTCACACTTGGTATTCTCTAAGAGACTAGAATGGAGTCAGTTATAAGAAGAGACTAGGAGAATACTC ATGCTGACATCAAAAGTAACAATCTAACAGCTAGCTAGTAACTACTGTATTCTCATAAATATTAACAGCATGAGTAATGT TTAGTTTTGGTGCGTAGTTATTGGTAGGCTGTTGAAAGTTATTACCGTTTTTCTTTGCTGTGTCAGTGACACATTTTTTA TCTGGATATACTTTTCAAATTTTAGGCAACTGATTATTTAAAAATCTAAGTATGGTAAAGTACTTGTTCATAAATGCATA AATTTTCATTACCACCCGAGGAGACATCTTCACCATGTTCTGGCTAGTGTAGTTGGTCTGTAGATTTTCAAATAAGCTTC AAAAGGGAGCTTGCCTCTGTCACCTTCTTGGCATGACATGGCTAGAATGCTTTTAGGATAAGCTTTGTATAAAAGTTAAA ACTGAAACCAATCCGTCATACTTTTATTCTTGTGAACAAGAGCATTGGTTTTTAATTTCCGGATACATACAGCAAAAGTA AGTTATAACCAAACCTTATCTCCCTAGTGAGGGAACTGCATGAATCATCATTGATGCCGTTTGAGTATATTGAGAATAGA TTTCTAGAGACGTTAGAAAGGTATTTTTCTAATCGTTTTTTCTTAATTTTTCTTTATTCTCATACTGCATTTAATATGGT TCGAATTCAAAGTCTCAAACAATCTTTCACGTTTTTCATTGGAGCCTCTATTGGTATTCTTGCATGACCAAGTCACTTTA TGTGAGTTTCTGCATATTCTCCATTTCATAATGTATAAAACTTGAAAAAGAAAAGAAGATAATAATCTCGAGTGGAAATA TGGATCTAACCTACATGCAGATTGATGTCCCTGACTAATAGCATGGTTTATTCACTTCTAACCCTCCCAGAGTCACTTAT CCCTCAAATGTGGAACCATAATTTTTGAAATCGGGTTGGGTGGAACAACTAGTTAAACCGGGAACTTGTCTGGTGACCGA TCCAAATGAAGGGGAAAACACATCAGAACTAGTGGATGTGGGTCAAGAACCAGCAAAGAATTGGTTGAATTGAGTCAAAA TTGGCGTATTGAACCACTTCAAACCCGCCATATTTTTATTTTCAATTTTTTGTATTAATAGAAAATATTCTTTATGCAAA TAATGGTCCATAGTCAAATTAGGAAGATCTACACTCTTAGTTTATTATGTTTTATCTTTATTGTTTTTATCTTATATAAG ACATGATATCATTTTATGTCAATTTAATTTTTTTTATTCACGTCAATTTAAAAGTTAATTTCACTGATTATCACAGTTGA ATAAAAAATCATAAATCAATGCCTTCACTGATTAAACAAGTAATCCATTTTTGAAATTTGGTGGAAAACTGAGTTTTGTA AACAAATTTTTAAAATTCTGAACCATATGCTACTGGCTTGAGGTAGTTCTGCTTCAGAGCTCTAAGCTAACACTGTCCTT TGTCTTGCTCTAAGCATGAGCATAATATCTGACCCAATTTGTTTCTTCATCCTTCGTAGGGGTGGCAACGGAGACTCGAT CCAGAATATGATGTATTGCAGGCGTTGCAGAAACTGCTATTTAAAGCTGACTTAGCAGAATCTCTGTCTTACACCATTGG AGAACTGGTAGCCCCATGAAAGCTAGCCATTTTGGTCGCCCCATATTTCAGCAGCATGGTGAAGAACTATTCCGATGATC TACAATTTCCCATGCCTCTTTTTCAGCTGTTCTTATTTTCTAAGAACATGCTGCGAACCTTGCATTGTAAATTCGTTGTA GTCTTCACATAATTTCCGATTCTTCTAATGATTGTGATGTAGAGTATAACAAGCCGCAATATAATGAATAAGCATTCAAT TTTGTTTGAGACTAAGAACACGCTGTCAACCTTGCATTGTAAAGTCATTGTAGTCTTCACATAATTTTTGTTGGTTATTT TAAAAATATAGTATGGGTAGAAGAGAAGAACGATAGCAGAGAATTGGGAGCACGAAGCATATTTTTATTCAGCAGCATAG CAACTGGTTTTAATCATTTGGTGGAGCTTTTGGCAGCAAAGCATGTTGCTG
CDS sequence (LotjaGi3g1v0325700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCAAGGCTTCTTGCTTGTGGAAATGTTAAAAGGTTTGCACGTGCTGTTCATAAGAAACATAACACTAGCTGTGTGGA AGTATTTTATCCTATGGGGGTCCCTTACTCAACATACAAACTTTTCTCATACTTTGGAGTTGCACACAAAGGGCAAACTC CATTTGTGTTATTTAAATCGAAGGTTAACTTGCTGATGAATGGCAAAGCGAGGAACTTGTATACCATCACTACAAATAAT GCAAGATATCATCATCATGCTCAAGTTTTTTGGAACAGGGTGTGTTTCAATAAAGGGACAGTTCCACCTCAAATAGGTCA AATTGCCCGTGCTGTAAGTCTGGCGATGATGAAATCAAATTTTGTTGTCCATGGTATGATTGCTTTCGTGATAGGAGAGC TTGCTTGGTCACGAGGGGAATTAGCCGAAGCACAATCCTTCCCAACAAGGGATTCACTGTACCTTCAAGCACAAGATAAG CGTGTGTATTTGACCTCAGCTCTCTTGGGAGTTCTTGAGATTTTAATCTTGTTTCTCAGGGCTGTCTATTTGGTAATTTT GTTCTCTCCTTGCATCGCTATGGCTCCTTTGGTTGACTATTTTGGCATTCAATTTAGGAAAACATGGATTCATTTTGTAC GCCTTACTCTTGAAAAGGCTGGCCCAGCATTCATTAAATGGGGTCAATGGGCTGCAACCAGACCTGATCTCTTTCCTAGG GATCTCTGTGGCGAACTTGCGGAATTTCAAACCAAAGCACCAGCACATAAATTTAGCTATAGCAAAAAAAGTATTGAAAA TGCATTTGGTCGCAAATTGACTGAAATATTTGAAAATTTTGAGGAGGAACCAGTAGCTTCGGGTAGCATTGCTCAAGTTC ATCGAGCTATACTGAAATACAAATACCCTGGTCGGCAAATCAAGCCTGTTCTTGTAGCAGTGAAGGTCCGACATCCAGGA GTGTCCGAAGCAATTAGAAGGGATTTCATCATTATCAATCTTGTCGCCAAGATTTCATCTTTCATCCCTAATTTGAGGTG GTTGAGATTAGATGAAAGCATACAGCAGTTTGCTGTTTTTATGATGTCTCAAGTTGATCTTTCAAGGGAAGCGGCATATC TTAGTCGTTTTATCTATAATTTCCGGAAATGGAAAGATGTTTCATTCCCAATGCCTCTGTATCCCCTTGTGCATCCTTCT GTTTTGGTGGAAACCTATGAACATGGTCAAAACGTGTTGCACTTTGTTGAAGAGCTTGAAGGACATGAGCATATCAAAAG TGCCCTAGCTCATATTGGAACACATGCTCTTTTAAAGATGCTTTTGGTTGATAATTTTGTCCATGCAGACTTGCATCCTG GAAATATTCTTGTCCGTGTAGTGAAAAGGAAATCACCGCCTATGCAGCTCTTTAAGTCAAGGCCCCATGTCGTTTTCCTT GATGTTGGCATGACTACTGAACTTTCTAAGGGGGAACGAGAATATTTACTGGAATTCTTTAAGGCTGTTGCACTTCAAGA TGGCCGCACTGCTGCAGAATGCACCCTTAGATTATCAAAACGACAAAATTGCCCTGACCCAAAATCATTCATTGAGGAAG TGGATAATTCTTTCAAGTTTTGGAGGTCCTCAGAAGGTGAATCTGTCCACACAGCTGACCGAATGCAACAGTTGCTTGAG CATGTTAGGCGGTGCAAAGTCAACATAGATGGCAATATCTGTGCTGTCATAGTGACAACATTGGTTCTGGAGGGGTGGCA ACGGAGACTCGATCCAGAATATGATGTATTGCAGGCGTTGCAGAAACTGCTATTTAAAGCTGACTTAGCAGAATCTCTGT CTTACACCATTGGAGAACTGGTAGCCCCATGA
Protein sequence (LotjaGi3g1v0325700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSRLLACGNVKRFARAVHKKHNTSCVEVFYPMGVPYSTYKLFSYFGVAHKGQTPFVLFKSKVNLLMNGKARNLYTITTNN ARYHHHAQVFWNRVCFNKGTVPPQIGQIARAVSLAMMKSNFVVHGMIAFVIGELAWSRGELAEAQSFPTRDSLYLQAQDK RVYLTSALLGVLEILILFLRAVYLVILFSPCIAMAPLVDYFGIQFRKTWIHFVRLTLEKAGPAFIKWGQWAATRPDLFPR DLCGELAEFQTKAPAHKFSYSKKSIENAFGRKLTEIFENFEEEPVASGSIAQVHRAILKYKYPGRQIKPVLVAVKVRHPG VSEAIRRDFIIINLVAKISSFIPNLRWLRLDESIQQFAVFMMSQVDLSREAAYLSRFIYNFRKWKDVSFPMPLYPLVHPS VLVETYEHGQNVLHFVEELEGHEHIKSALAHIGTHALLKMLLVDNFVHADLHPGNILVRVVKRKSPPMQLFKSRPHVVFL DVGMTTELSKGEREYLLEFFKAVALQDGRTAAECTLRLSKRQNCPDPKSFIEEVDNSFKFWRSSEGESVHTADRMQQLLE HVRRCKVNIDGNICAVIVTTLVLEGWQRRLDPEYDVLQALQKLLFKADLAESLSYTIGELVAP
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 623 | 623 | 0.0 | – | |
| PANTHER | 1 | 623 | 623 | 0.0 | – | |
| Phobius | 1 | 161 | 161 | - | – | |
| TMHMM | 120 | 142 | 23 | - | – | |
| Phobius | 162 | 188 | 27 | - | – | |
| TMHMM | 162 | 179 | 18 | - | – | |
| TMHMM | 181 | 203 | 23 | - | – | |
| Phobius | 189 | 623 | 435 | - | – | |
| CDD | 248 | 541 | 294 | 7.04792E-139 | – | |
| SUPERFAMILY | 262 | 484 | 223 | 1.51E-12 | ||
| Pfam | 268 | 391 | 124 | 4.9E-31 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0325700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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