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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0327100 |
| Transcript ID | LotjaGi3g1v0327100.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | FBT8; TAIR: AT2G33280.1 Major facilitator superfamily protein; Swiss-Prot: sp|O22780|FBT9_ARATH Probable folate-biopterin transporter 9, chloroplastic; TrEMBL-Plants: tr|G7IVP1|G7IVP1_MEDTR Folate/biopterin transporter; Found in the gene: LotjaGi3g1v0327100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:69499636..69504319) extracted from Lotus japonicus Gifu genome v1.2.
AATATCCCACCGTTATGAGACTAATCTCTCGAGCCTCCTCTCAGATCATGCTTAGTGTGTAAGTTTCTTCCAACAAATGT TTTTTCATACACATGATCCAATCATCGAACCTTAAAGAGCTCGACTATCTACCAATTGTTGTGTCGCTTATTGTTCCCCT TCATCTTTCTTTCTCTAATCTCTACACAAAAAAACAAAACAAATCGTCAAATCTTTCCTTAAAAATTCCAATTTAGCAAA AACCCATCGACACACTCTTCTAGATCCCTCTCTTCATCACCCTTCACCCTCATCTCTGGCACCTTCATATTCTCATTCCT TCTCCTTTCTTCACCCACAGCTCACAACAAGTGTCATCTTCTGTTTCGCTCTATCTTCATCTTTGGTCAAATCCAGACAC CACAACAAGGTTGCATTAGAATTTCCAAATCTAAGAACTGACCCATGATTTCCCTTTCAATTTCTTCACAGAACCCATTT GTTGGCAGCATGCCCAGGTCGCAAAAACTGCGTAAGAAGCCACCCTTACCGTCAAAATCGAGACCCATTATTAGTTTTCA GCAGAAGAACCCCAAGAACGCCGTGAACAAACCCACATTCACGGTGGACACGGCGGCGGCGGCGAACCTGTTTGTTGTGA GAGAGAAGGGGAAGAAGGAGAAGAGGGTGCATGAGGAAGAGAAGGGTCCTCCTCCTCTAGTTGGGAGCAAGCAAATGCTG CTCTTGTGTGGGCTTGGTTATTGGGTTCAGGGGTTTCGGTGTTTTCCATGGCTGGCTCTGAATTTTCACATGGCTAGCAA TCTGAATTTGCACCCTGCAACGTTGCAGCTTGTGCAGTACTCTGCGAATCTTCCCATGGTGGCTAAGCCCCTCTTTGGAA TCCTTTCGGATGCTTTCTATATTGGTGGTGCTCACAGAATCCCTTATATTGTCATAGGAGGTAAGTTCAAGCTAAACAAA CTTGTCTTATGTCTATATGCGGTGTGTTTTAATTTGTGTTTTATGTTTTGGTCACTTTTAAAATTATGAACTTTTTTTCC ATTGGAGTTTTTGTTTCTTTTGCTTTCTGTGGATGAGTCATGTAGAACTTAAATGGTATTGTCTCAGTATCATGAGGACA TGACCAATGGTTACAAAAATAGAAATTTCAGGCCTAGGAGTAGCTAGCCTTTCTGGATAGAGCTATTCATTGGAATATAT CTTTACATTTTAATATCATTCACTTTTGTGTTTTTAATGATTGTTTGAATGAGATTAAACTGCTCTATAGATTGAGATAG AAAACTGGTGTTAAATAAATTAAGTGAAAACTAGTATCAGAATTTAACACTTATCTCTTAGAAGCTGATGACTATGGCCA TGTTTGGATACACCGGTGCAAACGGAAGTTAGTATTTGGAACTTCTTTTATGGAGTGATGAAAGTTTATTTATGTTGTAC TCAATTAGTATCCAAACACATATTATAAGGTTACAAGAATTGAAATGTCAGTTAGAAAATGAATAGTTTGTACTCAATTA GCAGAGCCAGAGACTATGAATACTGAAAATTCAAAACAAACATAATCCATCTCCAAGTATAAATTTAAATCCTAATCCAA ATTGTGTCTGCAGTTCAACGTGTTTGTATCGGTATGATCTGATGTTTAGTTTTTCTGGCTCTGCTATTCCCTTTTTGGGT GTCCTTTTCATTTATATTAAGTTAGATTAGATATATCTTTAATTGTGTCAGTGTTTTTTGTGTTCAATTTTCCTCTTTCT GCATCTATGAACTCCATAAAGTGAAGTTTAACTTTGTTGAATACAAAACGGAACCTGGATTATTGGGTAAGGGGAGCGAA AATTTAATCATTAAGCAAAATCAACATACACTAGTTGAAAGAGGCCTTATAAAAAATTGAAGGAGGGCAAAAACAACATT TAACAAAATTATGAAATTACAAGAGGATAGCAGACCGAAAGAAAGACATTAAGAAAATTGAGGTGGGATTCTTGAAGTTA TTTGAGTTGCAACCGTAGCTATATGATTTTTAGTACTGAAGTAACTTATATATACTTCATATGAATTTGCCAAACTTAAT GCAGCTGTAACTTTTGAAATTCATGAGTTTCTTTTGTACACATGGTAAGTTGATTAGTGATTTTACAATAGCCATGTGTA TATTAATATCATAAGATATGAAAATGTAAAAAACAAAAAAAAAAGTTTGCATTATGTTTAGAAAAGTATGCCACACTGTG ACATATATGGTCTGACCGCCAGTCCAGTATATTCAAGGAAGTTTCTTTGCCACAGCAGCTGATTTAGGACAAGATTAGGT GTTTGGCTTCTATTTGATGTAAAGCTCATTATCTTTTTAAAGGGTTTCCTAATAGACATAAGACATGTTGAGGGACTGGA TAACCTTTGCTTCCTTGATGTTTCATTTTTTCCTTTGTCGTTTACGTTTCCTTTTATGATGAGGAGGATACCTTACATAC CCTGCAAATTCTTGTGACTATTTTGATATTCTCACTTGTCAACGAACTTCTTCTTTTATCTCTAAAAGTAAAACTTCTGT TCAATCTTCAGTTGTTTTGCAGGCCTTTTCTTGGGGTCTTCTAGCATTTGTCCCTATTGTACGTGATGTGCTTCCCAACT TAGTTGCAACTGCGCTTCTCAGCAACCTGGGAGCATCCATTACAGAAGTGGCAAAGGATGCTCTTGTTACAGAGTATGGC ATAAAGCACAAAATCGGTGGCCTACAGTCATACGCATTCATGGCATTAGCTGCAGGTGGAATCTTAGGCAACCTGGTTGG TGGTAATTTTTTGCAGAAAATGCCTCCCAGAATCATGTTCACCATATTTTCATCTTTACTGTCTCTACAACTAGCAATGT CTTTCTCAACAAGAGAGGACTCTTTAGGCATACCCCAACTTTCTGAGCAAAATCTTGCGGGGAAATCCATCTCAGAAAAC ATTCAGAAACAAGTGTCAGATCTTGTCACGGCAATCAGTGACGAAAGTATTTCCCGCCCTCTATTATGGATTGTTGGATC AATTGCCATGGTCCCAATGCTTTCAGGCTCTATATTTTGCTACCAAACACAGTGTCTAAATCTTGATCCTGAAGTAATTG GGTTGTCTCGAGTGATTGGCCAATTGCTGCTTCTTTCAGGAACCGTGCTTTATAACAGATATTGGAAAAAGTTTCCACTG AGAAGGCTGATGGGCATCGTGCAGATTATATATGCTTCGTCTCTACTTCTTGATCTCGTTTTGGTAAACCAAATAAATCT TAAGTTGGGAATTCCCAATAAGGTGTTTGCTCTTTGCTTTTCTGGTGTGGCAGAAGTTCTGGCTCAGTTTAAACTCCTTC CCTTATCAGTTCTATTTGCAACTCTGTGTCCAAAGGGTTGTGAAGGATCTCTCACCTCTTTCCTTGCATCAGCTTTGATT CTATCATCAATCACAAGTGGTTTTTTGGGGGTTGGATTAGCCTCTATGCTTGGCATTTCATCTGGTAATTACTCAGGCTT GACCGCTGGGGTTCTTATACAGTTCCTTGCAGCTTTACTACCTTTAAGATGGATTGATTCTTTACCTATGTCACAATCTG TTCCTGAGAGGAGAAGGAGGGGAAATATGAGCAGAAGAGCGCGAAGAAACAGAAGAGTTGGAAAAGTTGTGTTAGGTTCT ATTAATGACTACCGGCGCGAGAGGGAATGAGAGTCACATAGGTGAAAAATGACCAATTCTTAGTCCTTAACATCTTCAAT GATTGTGCAAGGATTAATAGTACTTGGCATTTTGTGGTTTTCATCTTCTTTCTCGGGAGGATGATTCCTTATGTCAAAAC TAGCTCGGGCGAGTTGACTTCTGATTCAAAGCTGGGATTTTTGCACCATGTTGAATTCTTATCTTGGGGCCAACACCTTC TCACAGGTGGTTTTTGAGCAGAGTGGTCCCTGTATATTTTTTTGTAAGTTTTTTTTTTGGAATTCAACATAGTGCCCCTC TCCATGCTCCCAGAGTCCCAGTGATATGCACTATAATTTACCTTTGTTTTTATGGTCATATCAATAATGTTCAAAGGTTA TTGACTGATCAGGAATATTCATCTCACCATCAGTTCATGAAGTTACTGATCAGGAATATTCATCTCACACCATCATCAGT TCATGAAGTTACTGAATCACAAGTATGAAAGAAATTACGATCCTTTTTTGGGAGCTGACACTTAAAGGCATAGCAGTGCA GAAATCATGATTGACTAGTGTTGTGAGGGATCTGCATTTGTTGATCAGGGAATAAATTACTTCACAGAATCACAGTAAAA GTTGAAGTTGATGCTGCATGCATAGAAAAAAAATCAATAATTTGTAAAAGAGAAGTATTTATCCAGGGTTTAATGGTACA ATTATAATTGAATCAGTGGTAATTAATTTTTCTATTATATACACATATATATTACCTTAAAAACTTAAAAGGTACAAACT AGTAACCACTGTCCAACAAAACTCTTGAAAAAAAACAGAAGTTAATTCGAAGTTCGTGTATAGGCATTTTGGGGTCTAAT GCGAAAATGCTAAAATGACTTTCTTTTGACAAGAATATTATCATATAAGTTATCAATTTTAATATTTTATACTTGCTATT TGTCATTTTCTCTTCAAAGAATAAAAATAACAAATAAAATAAAA
CDS sequence (LotjaGi3g1v0327100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATTTCCCTTTCAATTTCTTCACAGAACCCATTTGTTGGCAGCATGCCCAGGTCGCAAAAACTGCGTAAGAAGCCACC CTTACCGTCAAAATCGAGACCCATTATTAGTTTTCAGCAGAAGAACCCCAAGAACGCCGTGAACAAACCCACATTCACGG TGGACACGGCGGCGGCGGCGAACCTGTTTGTTGTGAGAGAGAAGGGGAAGAAGGAGAAGAGGGTGCATGAGGAAGAGAAG GGTCCTCCTCCTCTAGTTGGGAGCAAGCAAATGCTGCTCTTGTGTGGGCTTGGTTATTGGGTTCAGGGGTTTCGGTGTTT TCCATGGCTGGCTCTGAATTTTCACATGGCTAGCAATCTGAATTTGCACCCTGCAACGTTGCAGCTTGTGCAGTACTCTG CGAATCTTCCCATGGTGGCTAAGCCCCTCTTTGGAATCCTTTCGGATGCTTTCTATATTGGTGGTGCTCACAGAATCCCT TATATTGTCATAGGAGTTGTTTTGCAGGCCTTTTCTTGGGGTCTTCTAGCATTTGTCCCTATTGTACGTGATGTGCTTCC CAACTTAGTTGCAACTGCGCTTCTCAGCAACCTGGGAGCATCCATTACAGAAGTGGCAAAGGATGCTCTTGTTACAGAGT ATGGCATAAAGCACAAAATCGGTGGCCTACAGTCATACGCATTCATGGCATTAGCTGCAGGTGGAATCTTAGGCAACCTG GTTGGTGGTAATTTTTTGCAGAAAATGCCTCCCAGAATCATGTTCACCATATTTTCATCTTTACTGTCTCTACAACTAGC AATGTCTTTCTCAACAAGAGAGGACTCTTTAGGCATACCCCAACTTTCTGAGCAAAATCTTGCGGGGAAATCCATCTCAG AAAACATTCAGAAACAAGTGTCAGATCTTGTCACGGCAATCAGTGACGAAAGTATTTCCCGCCCTCTATTATGGATTGTT GGATCAATTGCCATGGTCCCAATGCTTTCAGGCTCTATATTTTGCTACCAAACACAGTGTCTAAATCTTGATCCTGAAGT AATTGGGTTGTCTCGAGTGATTGGCCAATTGCTGCTTCTTTCAGGAACCGTGCTTTATAACAGATATTGGAAAAAGTTTC CACTGAGAAGGCTGATGGGCATCGTGCAGATTATATATGCTTCGTCTCTACTTCTTGATCTCGTTTTGGTAAACCAAATA AATCTTAAGTTGGGAATTCCCAATAAGGTGTTTGCTCTTTGCTTTTCTGGTGTGGCAGAAGTTCTGGCTCAGTTTAAACT CCTTCCCTTATCAGTTCTATTTGCAACTCTGTGTCCAAAGGGTTGTGAAGGATCTCTCACCTCTTTCCTTGCATCAGCTT TGATTCTATCATCAATCACAAGTGGTTTTTTGGGGGTTGGATTAGCCTCTATGCTTGGCATTTCATCTGGTAATTACTCA GGCTTGACCGCTGGGGTTCTTATACAGTTCCTTGCAGCTTTACTACCTTTAAGATGGATTGATTCTTTACCTATGTCACA ATCTGTTCCTGAGAGGAGAAGGAGGGGAAATATGAGCAGAAGAGCGCGAAGAAACAGAAGAGTTGGAAAAGTTGTGTTAG GTTCTATTAATGACTACCGGCGCGAGAGGGAATGA
Protein sequence (LotjaGi3g1v0327100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MISLSISSQNPFVGSMPRSQKLRKKPPLPSKSRPIISFQQKNPKNAVNKPTFTVDTAAAANLFVVREKGKKEKRVHEEEK GPPPLVGSKQMLLLCGLGYWVQGFRCFPWLALNFHMASNLNLHPATLQLVQYSANLPMVAKPLFGILSDAFYIGGAHRIP YIVIGVVLQAFSWGLLAFVPIVRDVLPNLVATALLSNLGASITEVAKDALVTEYGIKHKIGGLQSYAFMALAAGGILGNL VGGNFLQKMPPRIMFTIFSSLLSLQLAMSFSTREDSLGIPQLSEQNLAGKSISENIQKQVSDLVTAISDESISRPLLWIV GSIAMVPMLSGSIFCYQTQCLNLDPEVIGLSRVIGQLLLLSGTVLYNRYWKKFPLRRLMGIVQIIYASSLLLDLVLVNQI NLKLGIPNKVFALCFSGVAEVLAQFKLLPLSVLFATLCPKGCEGSLTSFLASALILSSITSGFLGVGLASMLGISSGNYS GLTAGVLIQFLAALLPLRWIDSLPMSQSVPERRRRGNMSRRARRNRRVGKVVLGSINDYRRERE
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 16 | 16 | - | – | |
| MobiDBLite | 1 | 34 | 34 | - | – | |
| Phobius | 1 | 90 | 90 | - | – | |
| PANTHER | 14 | 536 | 523 | 4.1E-253 | – | |
| PANTHER | 14 | 536 | 523 | 4.1E-253 | ||
| Gene3D | 86 | 498 | 413 | 4.5E-14 | – | |
| Phobius | 91 | 112 | 22 | - | – | |
| SUPERFAMILY | 92 | 498 | 407 | 7.06E-27 | ||
| CDD | 99 | 500 | 402 | 9.4896E-87 | – | |
| Pfam | 102 | 507 | 406 | 6.5E-81 | ||
| Phobius | 113 | 131 | 19 | - | – | |
| Phobius | 132 | 152 | 21 | - | – | |
| TIGRFAM | 136 | 526 | 391 | 2.6E-99 | ||
| Phobius | 153 | 158 | 6 | - | – | |
| Phobius | 159 | 179 | 21 | - | – | |
| TMHMM | 159 | 181 | 23 | - | – | |
| Phobius | 180 | 184 | 5 | - | – | |
| Phobius | 185 | 206 | 22 | - | – | |
| Phobius | 207 | 225 | 19 | - | – | |
| TMHMM | 224 | 246 | 23 | - | – | |
| Phobius | 226 | 246 | 21 | - | – | |
| Phobius | 247 | 251 | 5 | - | – | |
| Phobius | 252 | 270 | 19 | - | – | |
| Phobius | 271 | 315 | 45 | - | – | |
| TMHMM | 316 | 338 | 23 | - | – | |
| Phobius | 316 | 336 | 21 | - | – | |
| Phobius | 337 | 347 | 11 | - | – | |
| Phobius | 348 | 366 | 19 | - | – | |
| TMHMM | 348 | 365 | 18 | - | – | |
| Phobius | 367 | 377 | 11 | - | – | |
| Phobius | 378 | 398 | 21 | - | – | |
| TMHMM | 378 | 400 | 23 | - | – | |
| Phobius | 399 | 409 | 11 | - | – | |
| Phobius | 410 | 437 | 28 | - | – | |
| TMHMM | 415 | 437 | 23 | - | – | |
| Phobius | 438 | 448 | 11 | - | – | |
| TMHMM | 449 | 471 | 23 | - | – | |
| Phobius | 449 | 473 | 25 | - | – | |
| Phobius | 474 | 478 | 5 | - | – | |
| Phobius | 479 | 497 | 19 | - | – | |
| TMHMM | 481 | 500 | 20 | - | – | |
| Phobius | 498 | 544 | 47 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
Expression pattern of LotjaGi3g1v0327100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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