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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0328800 |
| Transcript ID | LotjaGi3g1v0328800.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Pectinesterase; TAIR: AT5G51490.1 Plant invertase/pectin methylesterase inhibitor superfamily; Swiss-Prot: sp|Q9FHN5|PME59_ARATH Probable pectinesterase/pectinesterase inhibitor 59; TrEMBL-Plants: tr|A0A1J7GRS1|A0A1J7GRS1_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0328800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:69616565..69619997) extracted from Lotus japonicus Gifu genome v1.2.
TCTTATTATTGTTTCTCTCTTCTTATTCTTTTTCTAAACTACAAATTGCAATCATGGGAAATATATTCCTCACACTCTTA TTGTTACCTTCAATTTTCTCAATAGCCTCATCAAGAAGAGAACCTTCACCTTCCTCCAGCAACATAGGTTGGTGGTGCAA CCTAACCCCCCACCCTGAACCATGCAAACACTATATTACTCATATGAACCCCCATTCCACAATCAAACACAAAACTGAAT TTCGAGGAATGCTTGTTCAGTTGGCTTTAAAACAAGCACTTAACATGCAAAGGGAAGCACATGATTCTCAACAAAACATG GTCACAGATAAACACAGGACTGTACATGGTGATTGTTTGAAGCTGTATGAAAATACCATCTTTCATCTCAATCGTGCAAT TGAAAGTCTTGATCTGAAAAAGGGTTTCTCACCAGTTGATACACAAACTTGGCTCACAACAGCTCTCACAAATATCAGAA CATGTAGAACAGGGGCAGTGGATCTCAATGCTCAAGATTTCATGGTGCCAACAGGAAGCAGTAACGTCACTGAGATGATA AGGAACAGCTTAGCTATCAATGTTGATTTCCTGAAACAAAATGCTTCAAAATATCACACCTCAGAAACAGAGGAAGATGT GTTTCCAAGCTGGTTTTCTAGGCATGAGAGGAAACTTGTGCAGTCTTCTACGGTGAAGCCAAATTTGGTGGTAGCAAAAG ATGGTTCGGGAAACTACAGGACTGTCCAAGGTGCTCTGAATGCAGCTGCAAAGAGAAGATATAAAACAAGGTTTGTGATA AATGTGAAGAAAGGGGTGTATAGAGAGAATATTGAGGTTGCTGTGAAGAATGATAATATCATGCTGGTTGGTGATGGGAT GAAAAACACCATAATCACCAGTGGCAGAAGTGTTCAAGCAGGTTTTACCACCTATAGCTCTGCAACAGCAGGTGAGTGAT GTTCCAAGTTCCAACTCCTTTCTCTTTCACTTTTCACAAAATACTTCGATGAGAAATTCAAAATGATAATAGTAACCTCA TGACTCCCCCCCTACCTTTTTTCGAATCAATTTTGAAACCTAAAAGCTACTCGTAGAAGTTTCTCTCCAAAATTGATTTT GCTTTTAGAATAAATTGTACAAGAGTTTCTAAACCTGCACGGGATGATTTACTCTTGAATGATTAAAAAAATGCAGGCAT AGATGGCCTCCACTTCGTTGCACGAGATATTACCTTCCAAAACACTGCGGGTCCTCAAAAGGGTCAAGCCGTGGCGCTCC GGTCAGCCTCAGACCTCTCAGTCTTCTACCGATGTGCTATATTAGGTTATCAAGACACCCTCATGGTTCATGCACAACGC CAATTTTATAGACAATGCCAAATCTATGGCACCGTAGACTTCATCTTTGGGAACGCCGCAGTGGTATTTCAGAACTGCAA GATTTTCGCAAGAAAGCCTTTAGATGGCCAAGCAAACATGATCACAGCTCAAGGACGAGACGACCCATTCCAGAACACTG GAATCACTATCCACAATTCTGAAATCAGGGCGGCTCCGGACCTCAAGCCTGTTGTTGAGAAGCACAACACCTTCTTGGGC AGGCCCTGGCAACAATACTCAAGAGTGGTGGTCTTGAAAACTTTCATGGACACCTTGGTTAGCCCGTTAGGATGGTCTTC GTGGGATGGTACTGATTTTGCTCTTGACACTTTGTATTATGGAGAGTATGGGAACTCTGGGCCTGGTTCATCTGTGATAA ATAGAGTACAGTGGCCTGGGTTTCATGTGATAACAAGCCCCGCTGAAGCATCACGGTTCACCGTTAATGGACTTCTTACC GGCTCCATGTGGTTACGTGAAACAACTGTGCCATTTACCTCTGGTCTTTGATCTCTGCCATATAACTATTGCAGCAAAAA AAGTTCTACCATTTTACTATGTAAATTACATTTACTTATTTGAAATTAATATGTTGTAGTTATTTGAAAAAATTGTACAA TATTCTTTTGTATGTATTCTTTGTGTGTATTATAAAAGAAAAAAAAAACATTATTGTTTGAAATTGTATAATTGCTTGAG ATCTAATTAATATACTGCTTTACAAATCATCCTTTAATGCTTAAATGGACTAAGTTAGAAAATCACTCATTCTTACTATG AATTGAAAGGCTAATAAAGAAGTATATGCAACGAAAACTTACCAAAGATGAAGAGAAAAGTATGTGCAGAATGCAGTCCA CACCATTTCTAACCAAGTACAGCAAATAAAAAAATCTAAGACAAAGAAACTAATAAGATCAATAAGCAGGAACAAGATAC AGCAGGCAACGAACTCACAGCCCACAACCACAGTCATAGCCTGAACTAACGAAGGCTAAGTAACGACTATGAATTACAAT AATAGAGCATAGCATAAATCCACCAAGAGAACAATATAGCACAACAAGATGAACATCATAAAACACAAAATATAGCAGTA AATTTCTCAGACTTCCAATAACCACAAAGCATGACTCAAACACCAATTTCATCCCTAAAGAAATCCTAGAAAGTAGAAAC TCAAAATGCAAAAGTTATAAATTTATCCATTTTTAGCATTTTAATTGTGTACCTTGGGATTCATTTTCGATCAGAATAAG TTACAGGGTCATGTGTCATAGGGTGATAATTCTTATCATGTTCTAGTCTGATTCATTGAAAAAAAATGTGAAGGAAAGAA AAATTCTATCAAACTATCATCATAGTTGTGTAAAGGGGTGATTGATTTTCAGTTGAGACCAAGCAAACTCATCTTATTTA AGCCTTAAATCCTATGTTTGACACTAGGACTAAGCCTGGTCTAAGTCTCAACCTCATTTGTGTAGCCATCAATGGTAAAA ACTTGGTTTCCTCCTAATTCAAGATAAAGAAACTTAAACCAATGAGACACACAAAATTACAACAATGTACTTCGCATGTT CACCATATCTATTCTTGAGACACAAATAAAAAAAGCATAGGAAGGTTAAGGCAAGGCTATGTATTAATAGAGTAAGAAAA AAAGACCTTGGTGAAATTGCAGCAGGTACCATCTGTAGCACTGTATGGGGCTATGGGCAATTAGCTTCGGCACTAACCCC ACCATTGTTTATAACCCATTCAAAAGCATAATCCATCAAGCCTCCTTCACATCCATCATTAGTAGTATCCAAAGACTTAT AAGGTCCACAAGTTCTTGCTTCGAAAACCCTATACACAGATTTGTAATGAACCTATAGTATACCAACACAGGCTTAGGCT TAATTGTAGAGAGTTTAAGAAGAAAATATAAAGAACCAGCATATAGTATCCTTAGCTAGATGAGCTCATGTTTGTTTTAG TTGCCACTATTATAATATATAAGAGGCTAGTTTAGTTTTGCTTCCAGATCGATATAGATAACTACTAAGTAAC
CDS sequence (LotjaGi3g1v0328800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGAAATATATTCCTCACACTCTTATTGTTACCTTCAATTTTCTCAATAGCCTCATCAAGAAGAGAACCTTCACCTTC CTCCAGCAACATAGGTTGGTGGTGCAACCTAACCCCCCACCCTGAACCATGCAAACACTATATTACTCATATGAACCCCC ATTCCACAATCAAACACAAAACTGAATTTCGAGGAATGCTTGTTCAGTTGGCTTTAAAACAAGCACTTAACATGCAAAGG GAAGCACATGATTCTCAACAAAACATGGTCACAGATAAACACAGGACTGTACATGGTGATTGTTTGAAGCTGTATGAAAA TACCATCTTTCATCTCAATCGTGCAATTGAAAGTCTTGATCTGAAAAAGGGTTTCTCACCAGTTGATACACAAACTTGGC TCACAACAGCTCTCACAAATATCAGAACATGTAGAACAGGGGCAGTGGATCTCAATGCTCAAGATTTCATGGTGCCAACA GGAAGCAGTAACGTCACTGAGATGATAAGGAACAGCTTAGCTATCAATGTTGATTTCCTGAAACAAAATGCTTCAAAATA TCACACCTCAGAAACAGAGGAAGATGTGTTTCCAAGCTGGTTTTCTAGGCATGAGAGGAAACTTGTGCAGTCTTCTACGG TGAAGCCAAATTTGGTGGTAGCAAAAGATGGTTCGGGAAACTACAGGACTGTCCAAGGTGCTCTGAATGCAGCTGCAAAG AGAAGATATAAAACAAGGTTTGTGATAAATGTGAAGAAAGGGGTGTATAGAGAGAATATTGAGGTTGCTGTGAAGAATGA TAATATCATGCTGGTTGGTGATGGGATGAAAAACACCATAATCACCAGTGGCAGAAGTGTTCAAGCAGGTTTTACCACCT ATAGCTCTGCAACAGCAGGCATAGATGGCCTCCACTTCGTTGCACGAGATATTACCTTCCAAAACACTGCGGGTCCTCAA AAGGGTCAAGCCGTGGCGCTCCGGTCAGCCTCAGACCTCTCAGTCTTCTACCGATGTGCTATATTAGGTTATCAAGACAC CCTCATGGTTCATGCACAACGCCAATTTTATAGACAATGCCAAATCTATGGCACCGTAGACTTCATCTTTGGGAACGCCG CAGTGGTATTTCAGAACTGCAAGATTTTCGCAAGAAAGCCTTTAGATGGCCAAGCAAACATGATCACAGCTCAAGGACGA GACGACCCATTCCAGAACACTGGAATCACTATCCACAATTCTGAAATCAGGGCGGCTCCGGACCTCAAGCCTGTTGTTGA GAAGCACAACACCTTCTTGGGCAGGCCCTGGCAACAATACTCAAGAGTGGTGGTCTTGAAAACTTTCATGGACACCTTGG TTAGCCCGTTAGGATGGTCTTCGTGGGATGGTACTGATTTTGCTCTTGACACTTTGTATTATGGAGAGTATGGGAACTCT GGGCCTGGTTCATCTGTGATAAATAGAGTACAGTGGCCTGGGTTTCATGTGATAACAAGCCCCGCTGAAGCATCACGGTT CACCGTTAATGGACTTCTTACCGGCTCCATGTGGTTACGTGAAACAACTGTGCCATTTACCTCTGGTCTTTGA
Protein sequence (LotjaGi3g1v0328800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGNIFLTLLLLPSIFSIASSRREPSPSSSNIGWWCNLTPHPEPCKHYITHMNPHSTIKHKTEFRGMLVQLALKQALNMQR EAHDSQQNMVTDKHRTVHGDCLKLYENTIFHLNRAIESLDLKKGFSPVDTQTWLTTALTNIRTCRTGAVDLNAQDFMVPT GSSNVTEMIRNSLAINVDFLKQNASKYHTSETEEDVFPSWFSRHERKLVQSSTVKPNLVVAKDGSGNYRTVQGALNAAAK RRYKTRFVINVKKGVYRENIEVAVKNDNIMLVGDGMKNTIITSGRSVQAGFTTYSSATAGIDGLHFVARDITFQNTAGPQ KGQAVALRSASDLSVFYRCAILGYQDTLMVHAQRQFYRQCQIYGTVDFIFGNAAVVFQNCKIFARKPLDGQANMITAQGR DDPFQNTGITIHNSEIRAAPDLKPVVEKHNTFLGRPWQQYSRVVVLKTFMDTLVSPLGWSSWDGTDFALDTLYYGEYGNS GPGSSVINRVQWPGFHVITSPAEASRFTVNGLLTGSMWLRETTVPFTSGL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 530 | 530 | 5.4E-286 | – | |
| Phobius | 1 | 20 | 20 | - | – | |
| SignalP_EUK | 1 | 20 | 20 | - | – | |
| PANTHER | 1 | 530 | 530 | 5.4E-286 | – | |
| Phobius | 1 | 3 | 3 | - | – | |
| Phobius | 4 | 15 | 12 | - | – | |
| TIGRFAM | 4 | 176 | 173 | 2.1E-17 | ||
| Phobius | 16 | 20 | 5 | - | – | |
| Phobius | 21 | 530 | 510 | - | – | |
| SMART | 26 | 175 | 150 | 1.7E-20 | ||
| Gene3D | 27 | 181 | 155 | 1.7E-11 | ||
| SUPERFAMILY | 29 | 176 | 148 | 2.49E-23 | ||
| Pfam | 31 | 175 | 145 | 1.8E-18 | ||
| CDD | 33 | 176 | 144 | 2.76325E-24 | – | |
| Gene3D | 210 | 530 | 321 | 8.7E-126 | ||
| SUPERFAMILY | 212 | 529 | 318 | 7.07E-105 | ||
| Pfam | 217 | 515 | 299 | 4.1E-134 | ||
| ProSitePatterns | 362 | 371 | 10 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Enzyme inhibitor activity | Binds to and stops, prevents or reduces the activity of an enzyme. | ||
| Molecular function | Pectinesterase activity | Catalysis of the reaction: pectin + n H2O = n methanol + pectate. | ||
| Biological process | Cell wall modification | The series of events leading to chemical and structural alterations of an existing cell wall that can result in loosening, increased extensibility or disassembly. |
Expression pattern of LotjaGi3g1v0328800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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