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LotjaGi3g1v0331100.1

Overview

Field Value
Gene ID LotjaGi3g1v0331100
Transcript ID LotjaGi3g1v0331100.1
Lotus japonicus genome version Gifu v1.2
Description Protein kinase-like protein; TAIR: AT4G36950.1 mitogen-activated protein kinase kinase kinase 21; Swiss-Prot: sp|Q54R82|MKKA_DICDI Mitogen-activated protein kinase kinase kinase A; TrEMBL-Plants: tr|A0A0B2S5G3|A0A0B2S5G3_GLYSO MAP kinase kinase kinase mkh1; Found in the gene: LotjaGi3g1v0331100
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr3:69973005..69973894) extracted from Lotus japonicus Gifu genome v1.2.

AAATAAAGAAAATATGATGATGATGAGTGTGCCTGGGTGGATGAAGTTAAGAACATTGGGGAATGGTTCCTCTGCAACTG TTTACCTTGCCGTTGTCATTCCGTCACAAGGAAAAAGAAAGGTGGTAGCTGTGAAGAGTTCAAGGCCATTCTTGAGTGGT CCACTGCAAAGAGAGGAAAGGATCATGAAATCATTCATTGGTTGTGAAGAAATCATTCAATGCTATTTTGGCCAACCTAC TTTGGAGAAAGGTCATTTCACCTACAACCTCTTCATGGAGTTTACACCTTACGGTTCTCTTGGAGATTTAATCAGGAAGA GGCCAATCTTTGAATACGAAGCAAGAGTCTACACCCGCATGCTTCTCAAAGGACTTTCTCGCATTCATCGCGTTGGAGTT GTTCATTGCGATCTGAAACCCGACAACATCCTTATCTTTCCTTCATCTGAGGGTGATATTGTGAAATATCAAGTGAAGAT TGCAGATTTTGGATTGTCCAAGACTAGAGAAGAGGTAGTCAGTGCTGATTGTTGGGACCTAAAGTTCAGAGGGACACCAC TTTACATGTCGCCGGAATCGGTTATGGGTCAGATTGAATCACCTTTAGATATCTGGTCCCTCGGGTGCATTGTAATCGAG ATGATAACAGGGATACCGGCATGGAAGAATATACAAACCAGTGACGAGGTGATGTTAAAGCTTGCATTCGTTACAGAACA ACGAATGATACCAAATGGAGTAAGCTCTGATTGTAGAGACTTCTTGAGCAAGTGCTTTGTGATTGATCCTAACCAGAGAT GGACAGCTGACATGCTTCTGAATCATCCTTTTTCCTGCCTATGATATATTTTGAAGTTTATGAACGATTTCATGTATACT TAGTTTATCA
Download Genomic Sequence

CDS sequence (LotjaGi3g1v0331100.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGATGATGATGAGTGTGCCTGGGTGGATGAAGTTAAGAACATTGGGGAATGGTTCCTCTGCAACTGTTTACCTTGCCGT TGTCATTCCGTCACAAGGAAAAAGAAAGGTGGTAGCTGTGAAGAGTTCAAGGCCATTCTTGAGTGGTCCACTGCAAAGAG AGGAAAGGATCATGAAATCATTCATTGGTTGTGAAGAAATCATTCAATGCTATTTTGGCCAACCTACTTTGGAGAAAGGT CATTTCACCTACAACCTCTTCATGGAGTTTACACCTTACGGTTCTCTTGGAGATTTAATCAGGAAGAGGCCAATCTTTGA ATACGAAGCAAGAGTCTACACCCGCATGCTTCTCAAAGGACTTTCTCGCATTCATCGCGTTGGAGTTGTTCATTGCGATC TGAAACCCGACAACATCCTTATCTTTCCTTCATCTGAGGGTGATATTGTGAAATATCAAGTGAAGATTGCAGATTTTGGA TTGTCCAAGACTAGAGAAGAGGTAGTCAGTGCTGATTGTTGGGACCTAAAGTTCAGAGGGACACCACTTTACATGTCGCC GGAATCGGTTATGGGTCAGATTGAATCACCTTTAGATATCTGGTCCCTCGGGTGCATTGTAATCGAGATGATAACAGGGA TACCGGCATGGAAGAATATACAAACCAGTGACGAGGTGATGTTAAAGCTTGCATTCGTTACAGAACAACGAATGATACCA AATGGAGTAAGCTCTGATTGTAGAGACTTCTTGAGCAAGTGCTTTGTGATTGATCCTAACCAGAGATGGACAGCTGACAT GCTTCTGAATCATCCTTTTTCCTGCCTATGA
Download CDS Sequence

Protein sequence (LotjaGi3g1v0331100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MMMMSVPGWMKLRTLGNGSSATVYLAVVIPSQGKRKVVAVKSSRPFLSGPLQREERIMKSFIGCEEIIQCYFGQPTLEKG HFTYNLFMEFTPYGSLGDLIRKRPIFEYEARVYTRMLLKGLSRIHRVGVVHCDLKPDNILIFPSSEGDIVKYQVKIADFG LSKTREEVVSADCWDLKFRGTPLYMSPESVMGQIESPLDIWSLGCIVIEMITGIPAWKNIQTSDEVMLKLAFVTEQRMIP NGVSSDCRDFLSKCFVIDPNQRWTADMLLNHPFSCL
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Phobius
SIGNAL_PEPTIDE_N_REGION
1 17 17 - –
Phobius
SIGNAL_PEPTIDE
1 33 33 - –
Gene3D
G3DSA:1.10.510.10
6 276 271 3.5E-57 –
SUPERFAMILY
SSF56112
6 273 268 1.19E-60
IPR011009
CDD
cd06606
9 273 265 2.72124E-95 –
SMART
SM00220
9 274 266 6.1E-61
IPR000719
ProSiteProfiles
PS50011
9 274 266 36.866
IPR000719
Pfam
PF00069
10 273 264 4.1E-47
IPR000719
ProSitePatterns
PS00107
15 41 27 -
IPR017441
PANTHER
PTHR24361:SF763
16 274 259 1.9E-81 –
PANTHER
PTHR24361
16 274 259 1.9E-81 –
Phobius
SIGNAL_PEPTIDE_H_REGION
18 29 12 - –
Phobius
SIGNAL_PEPTIDE_C_REGION
30 33 4 - –
Phobius
NON_CYTOPLASMIC_DOMAIN
34 276 243 - –
ProSitePatterns
PS00108
129 141 13 -
IPR008271

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi3g1v0331100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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