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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0333700 |
| Transcript ID | LotjaGi3g1v0333700.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | 11S globulin seed storage protein; TAIR: AT1G03890.1 RmlC-like cupins superfamily protein; Swiss-Prot: sp|P07728|GLUA1_ORYSJ Glutelin type-A 1; TrEMBL-Plants: tr|B9H8M5|B9H8M5_POPTR Legumin family protein; Found in the gene: LotjaGi3g1v0333700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:70308338..70310995) extracted from Lotus japonicus Gifu genome v1.2.
GGTTCTGGAACTGCTGCTAAAAGTTTTGTGTTAATGTATGGCGACGGTTGAAAGCGCCGCCATAGCTTAATAAGTAAAAA ATCAAAATTCACGGTTAACATCAAATTAGAACGCGGTTTTTCTTTCTTTCTTTCTTCCATTGTTGCTTTTTGGCATACAT CAACTTAAAATCATTTTCCCCAAAAATTGAAAACCCACCAATCTTCACATTCCTAAATTTCTCATCATATGGAGAACCCT GATCACCGCATCAATCAACCACAATTCTATTTCTATTTTTTTTTAATTTTCAATTTTCAAAGATTTTTTTTGGTTTACGA ACTTGTTGCACGCGTTGAGTTGGATTGATTTTTTGGGTGAGAATTTTTGCTTGTGAACTCAGCAGATCTGAGTTCTTTGA TGGAACCATGTGGGGTTTGGAGCTACCTCCGTTTGTTTTTGCTGATGAGTTTTCCTGTTTTGATTGTTGATTCGTGTCTC TAAATTTTGGAATGTTAAATTAGCAACATTGTAATGTTTTCTCCAAAAAAAAGCAAAATTTGTTCTTTTTACTGCACAAA TTGGTCTTAACTTTTCTTGGTTGAATAAAATTTTGTGTTTTTCATGTGAGATTATAGCTACTTCTTGCTTAATAACTAAT ATAATTTTTACTTTATATTTTAGTCTATAATTTATTTTATATTTAGCCTCACCAATATATAATGTCTGGATCCGCCCCTG GCTGTCGTCAAGCGCACTATCAACCCCGCAAGCCTTCTCTTGCCATACTACACTAATTATCTTGAATTCCATTACATCAT CCAAGGTCATCTATCACACATATTTACGAGTAATTGTACATAGTTATACAATTTGCGGTGACACAGACATACATAACTTC CTCAAAGGTGTATGTATGTCCAAAGGATGATCACCACAAATTATATGTCTTAATCATTTTTAATTGGAATGTCCATTCTA ATATATATACATGTGTATTTCAGGTGAGGGAGTAGCCGGGAGTGTAGTTCCTGGTTGCGCAAATCGCATGATCATTCACT TCCGACGTGGTGATGTCATCGCAAGCTACCCTGGAGTACCTTTTTGGGCTTACAACAAAGGCAAGCAACAAGTTGTTGCC ATCAGTGTTGGCTTCATCAACTCCGCAAATCAGCTTGGTGTTATCCCTAAAGTAAGCTAATTAACTCAATCACTAATTTA ATTTCAGGCTAAATATGTTTTTTGTCACTACAAAATAGTGAGTTATTGATTTTGATTCCTTTAAAATAATCCACAATTTT TGAAAATACATATGTTTCACTCTCTGGGACGGACTAAATCAGATTTTAAGGACTACAAAAATGATTTCAAGAACTGAAAT CACTAAAAAAATGGTCCTTTAGAATTACTTTTTCTTTAAATATCGTTTATTTTAGGGATTCAAATTAAATATGTGTATTT CCAGAAATTGGAAATATATTTCAAAGTATATTTTAGAGATCAAAATTAATAATTCTTTATTTTTTAGGGGCTAAAATAAT ACTGAACCATTTAATTTACATTCACGTACTCATCAACATGGTCATAACTAAGAGTTTTCAATTAATGGATTGCAGAGATT CTATCTTGCTGGGAATAATACAGAAGAGAATTTCAACCTGGATCACAACGTGTTCAGCGGCTTGGACACAGGGTTATTAG AAGAAGTGCTAAACGTAAATGAAGACATTGTAAGAAAGATACAATCTGAAGATCCAAGGGGCCAAATCGTAAAAGTGCAA GGACAATTTACCAGCATTTCAAGTTCACACCAACCAATAACTACACAAGAAAGGAATAAGCACCAAAGTGGGTACCATGA AGCTTGCACCTTCAAGTGTTATGTGAACATTATTGATAACTCTTCATACACCCTCTATAATCCAAGAGCTGGTCGCTTAT CCACCGTTAACAACTTCAACCTCCCGATCCTCCACCTATTAAAGTTGAGCGCCCGACATCTTGTCCTTTATAAGGTAACT TATAGAGCAAGAAAAAAATGGTTCACAAGTTAAAAGAGTTTCTTTAAAAATTAAGAACATAGCATACAAAATATTTGTTA ACATGAAATGTTTTATATGCACAGAATGGAATAGCTTCTCCGAGCTGGGAGATGAACGGACATAGAGTGATGTACGTGAT TAGAGGTCATGCAAAGGTTCAAGTGGTGAACTCCGAAGGCAACTCAGTATTCGAAGGTGAAGTCACAAAAGGACAAGTTT TGGTGATCCCTCAGGGCTTTGTGGCGACAAAACAAGCAGGAAGTGAGGGATTTGAGGCCATAGAGTTCGTCACGAATGAA AACTCCATGTTTGTGTCCCTCGTTGGGATGCATTCATTGCTGAGATCCATTCCTGTAGATGTTCTTGCCAATGCATACAG GCTTAACCCAAATGAAGTGAGCGCACTCATGTTCAACCAAACCCAGGGACCTCTAGTTAACTATTAGCCCCGTCAGATCC TATTAGGTTCAGTATGGGACGGGTACTAGAATAATGAAAATTGTAATGTTATATGGCTCTAGCTAAATGTTACTTGCTTA TGCTCAAGTAACATTGATCATTTAAATAAAACGTGACTTCAAAGAATTTTAATAAAGTGATATTGTATGGCACTAGCTAA ATGCATGTTACTTGCTAG
CDS sequence (LotjaGi3g1v0333700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATCATTCACTTCCGACGTGGTGATGTCATCGCAAGCTACCCTGGAGTACCTTTTTGGGCTTACAACAAAGGCAAGCA ACAAGTTGTTGCCATCAGTGTTGGCTTCATCAACTCCGCAAATCAGCTTGGTGTTATCCCTAAAAGATTCTATCTTGCTG GGAATAATACAGAAGAGAATTTCAACCTGGATCACAACGTGTTCAGCGGCTTGGACACAGGGTTATTAGAAGAAGTGCTA AACGTAAATGAAGACATTGTAAGAAAGATACAATCTGAAGATCCAAGGGGCCAAATCGTAAAAGTGCAAGGACAATTTAC CAGCATTTCAAGTTCACACCAACCAATAACTACACAAGAAAGGAATAAGCACCAAAGTGGGTACCATGAAGCTTGCACCT TCAAGTGTTATGTGAACATTATTGATAACTCTTCATACACCCTCTATAATCCAAGAGCTGGTCGCTTATCCACCGTTAAC AACTTCAACCTCCCGATCCTCCACCTATTAAAGTTGAGCGCCCGACATCTTGTCCTTTATAAGAATGGAATAGCTTCTCC GAGCTGGGAGATGAACGGACATAGAGTGATGTACGTGATTAGAGGTCATGCAAAGGTTCAAGTGGTGAACTCCGAAGGCA ACTCAGTATTCGAAGGTGAAGTCACAAAAGGACAAGTTTTGGTGATCCCTCAGGGCTTTGTGGCGACAAAACAAGCAGGA AGTGAGGGATTTGAGGCCATAGAGTTCGTCACGAATGAAAACTCCATGTTTGTGTCCCTCGTTGGGATGCATTCATTGCT GAGATCCATTCCTGTAGATGTTCTTGCCAATGCATACAGGCTTAACCCAAATGAAGTGAGCGCACTCATGTTCAACCAAA CCCAGGGACCTCTAGTTAACTATTAG
Protein sequence (LotjaGi3g1v0333700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MIIHFRRGDVIASYPGVPFWAYNKGKQQVVAISVGFINSANQLGVIPKRFYLAGNNTEENFNLDHNVFSGLDTGLLEEVL NVNEDIVRKIQSEDPRGQIVKVQGQFTSISSSHQPITTQERNKHQSGYHEACTFKCYVNIIDNSSYTLYNPRAGRLSTVN NFNLPILHLLKLSARHLVLYKNGIASPSWEMNGHRVMYVIRGHAKVQVVNSEGNSVFEGEVTKGQVLVIPQGFVATKQAG SEGFEAIEFVTNENSMFVSLVGMHSLLRSIPVDVLANAYRLNPNEVSALMFNQTQGPLVNY
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 1 | 140 | 140 | 1.1E-33 | ||
| PANTHER | 2 | 300 | 299 | 1.3E-93 | – | |
| PANTHER | 2 | 300 | 299 | 1.3E-93 | – | |
| SUPERFAMILY | 2 | 294 | 293 | 7.52E-48 | ||
| Pfam | 5 | 57 | 53 | 3.1E-6 | ||
| PRINTS | 137 | 154 | 18 | 3.0E-40 | ||
| Gene3D | 143 | 301 | 159 | 7.9E-43 | ||
| SMART | 146 | 287 | 142 | 3.5E-39 | ||
| Pfam | 148 | 286 | 139 | 8.5E-29 | ||
| PRINTS | 160 | 180 | 21 | 3.0E-40 | ||
| PRINTS | 206 | 222 | 17 | 3.0E-40 | ||
| PRINTS | 224 | 239 | 16 | 3.0E-40 | ||
| PRINTS | 242 | 260 | 19 | 3.0E-40 | ||
| PRINTS | 264 | 281 | 18 | 3.0E-40 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Nutrient reservoir activity | Functions in the storage of nutritious substrates. |
Expression pattern of LotjaGi3g1v0333700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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