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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0340900 |
| Transcript ID | LotjaGi3g1v0340900.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Plant transposase (Ptta/En/Spm family); TAIR: AT3G30200.1 Plant transposase (Ptta/En/Spm family); Swiss-Prot: sp|B3DZZ7|GPMA_METI4 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase; TrEMBL-Plants: tr|B1B5X5|B1B5X5_TOBAC 6b-interacting protein 2; Found in the gene: LotjaGi3g1v0340900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:71576278..71581698) extracted from Lotus japonicus Gifu genome v1.2.
CATTAATTGGGTTCAAATGGTAAAGAATTCAAAATTATAATTTAAAGCTCACCCCTATGTTGGGATTAGAAGTTGATTGA GGAGCAGGCTTTGATTGAACAACTTTCTTTAGCAAAACATGAGTTTTGTTGGGCTTGAGCATCCTCAGTGTTCTTAGAGG TAACTTTATCCTCTTACCCAAGCCCTTTATGTGTTCCTTCTTCATTAAAGATGAAGAAAGTACTATCATATCATCACCAT AATTCTAACCCTTGGTTTTGGGGTGGGTGGAACGTTGGAAGAGTAAGAGGGCTTTTTGGGTATGTTCAAGATTTTCTTCA TATATCACAGCAAAAACTTTAGCGTTTAGGGGCGGTTGGAACTGCCGCTAAAAAAATTATATTTTTATTTTAGCATTTTC AATTAACCGGGTATGTTTGTTTTCCCTTCCAAGCATAATTTAGAAACCCTTTTCCCTTGGCTCGCAAACTCCACCGGAAA GCACCGTGAAACTCTCTCTCCGTCGCCAATCGGTTGCAGCGTTGCGGTTTGCTTTGCCTGCAGCAGCATCACCCTCCGTC GCCGATCTTCTTGCATGCATTTCTCTCTCTCTCGCTCTCTTTTACTTTCCAATTCGTAGTGTAGTAGTAGTTTCATGTGT ATTGATTTTTCTGAATTGAGTTGAGGTAACTCGCTTTCTCTTGTCAGCCTCTCAAATCTGTTTCTGCTATGAGATATATT CATTTAAATGCTTTTGTTCACTTGCCACCAATTTCAATCTGCATTGATGTTGATGTTCTTCAATTATGAATCCCTATACT TGAAGAATTATACTAGGCTTCCCGCGATTAGGGAAGATCAATTTAATCTGTTTGTGACATGCCAGTATCATTTGAGAACT ATAGCACTTAGTTAATTTGTACTGTAGCATGATTTCAGCCATTCAATTCCCCTGGAAATGATCTAATTCGAGCTTCAAGT TCATTTACATGCAAAAATTGAATGAAACAAAGATATAGACAGGCTCTAGGGAACAGAAAGATAGTATTGTGCTTAATGTT TCTTGCTGAATAATTAGTTAGGTTTAGATGTTTGATTATTGGTTTTAGTTGAAGATTATGCTTCAAGTTTGAATTGGTCT ATAATCGCCAAGCAAGGCTACTGCCAGCATCTACAGAACCCGATTCAGATCATGATGGTGGAGCCTGAGTTGACATCCCA AGGACTGTTAAGTAGCTCCTGCGGGAGGCAATCTATTAAGCGAAAAGTCCTTTTTTATTGGATTCGTGTTTTCGAGATTA ATAAGTGGATTTTGTTGCTGACTCAAAATTCTAGTCTGTCTCAGACAACTTAGCAAGCTTTTTTTCCTTAGCTATATTGG CAGCAACTTTTGACCTTTGAAATTTGAATGACTTCATTAAGCTTCTTCGCTTGCTAATATTGAAGCTCAATTGTCTAGGC CTGGTGTATGTGTAGAATTTGACTAAAATAAATAACAAGAGTTGTCATTTTCCTCTTATTGTTATTTCTTCTTGTAGTAT TTGATGTGAGTTTAACTTCTTGATGTTATTTGTAATCTTCTTAATTCTATTGTTGATGATATATCTAATGCTTCTTTTAT ACAAAGTATGGCTGCGAAAGGTAAACAAATACAATCCACTTCATCTTATATGGTGCCACATCAGCCGTCACACGATTCAT CCGATCATGAACCGTTCTTGGATGATGAGATTGGGGAGCTACAGCTTGATTCCTCAACTGGCGTTGAAGGTCAACCTGCT GATAAACATATGGTTCAAGTGAGAAGTATGTCATTTAACTTAATTTTCGTACATTTCGTTCAGGTGTTAGTTCATGTATT AGTTTATATAGTTAATATTAAATGTTTAACACTTTGTCTTTCCAGATAATGAAGGGGAGGTGAAAGAAATCCTTATGGAG GTTAGTGACATTAACTACCTCCCACCTGGAGACAAGGTTGTAATTCCTTTTGATGGAAACCAACCAAGCACCAAATGCCA ATTGGCTGTTGGGAGTTTTCTTGGGTCCAGTAGCCATAAATCACAGTTTCTTACCTATTAGCTTTAAATGTTGGCCTCAT GTACCGAAGGACTATATGGATCGTGTTTGGGATGAAATCATTAAGGTATTGAAGTAAATAATTTCTTGTTAGTTACCTAT AATACTTCGTTGCAGTTATAATATATTGTCATATCTAACATTGGCATGTAATTTAAGTCTAAGCTATGGTGGGACCCAGT CCATGATGGTGCAGCTAGAGCCTATGTGATGAAAGACCTAGGGAAAAAATGGACGGAACATAGGCTCAGATTATATAATG AACATTATGACGTGACAAAGACAAGAGATGAGAATATCCGGTTCCCCCCAAAAGGGATTGCAGCAACACAGTGGGCTTCT TTTATAGGTTATAGATTGGAGGAGAAAACTAAGGTAATCGGATTTCTCAATATTTAAATGATTTACCATCCTAATAGAAT TGACTTTTCTTTGTGCTTGTTTGTAGGCAATATGTCAACAAAATTCCAAGAATAGAGCCAAACTTGCAATGAATCACACT AATGGCTCTACAAAACTCAAGAGAAAGCGGGCAGAGATAGTATGTATTTGAATATAGTAAAACTTGTTATTCAAATTATG TAGAATGTATACTTGACTTTTGAAAATATGATTATGATCAAAAGATAAGCCAAACTGGACTACCAGTGAGTAGGGGTGCC TATTTTGTTGTTTAGCATTTATACTTAACATCTTATAACTTGAATCATATAGGAAAAAGTTGCTGAGATTGAGAAACATG GAACTGCTCCCAAGGAAATCTCACGTGATGACTCTCCTGATCAAGTTTTTGTAAGAGAACATCAAGGTGTGGGAGATGGA TTTTTCCCGACACGAGTGTTTGGATCTAAATACCATTGCTTTTGTGGTACTTCTTCGAGCTTCAATAATACGACTTTAGA AAGTCGTATTGCACACCTAGAGAATGAAATCCAGGAACTAAAGACTAAGTCAAAAACAAGAGATGAAAATTTGAAGAAGA TGGAGATGCTTCTTGTTCAACTACTTATGAATGCGTCATTGCCCATACCGTCTTTTCTCGCAACTAGCCTTGATGATGCT GTAAGTTACTCTTGTTACTACATGGTCTAGTATTATTCTGTAATCTATCCATTGTATAATAAGCTTTATTTTGTTTTTAT TATTGCAGAAGACTTCTGATGATGATGCTTCTACTTAGCTCGGCACTAGTCAACCATAGTAAGAATGGGAATGTGTTAAT GTACTTCATGTTTTTAAGTAGGTGACTAGCTTTTGAAAACTATAATTAGCTTAATTTGGTCAACATTTTGAAACTACAGC TGGGTTTGTTTATTGGTATTTTGTACTTTTCTACATATGGTATGCATTTTGAGAGTACAATTGGATCCCTTTGTTGGTAT TTTGTAACAAAATTTGAATGCATTTATGAGTACTATGGGGCATGATCACACATCGGACATGGCTTTTGTTTAGAGAATTT AGAGGTTTTGTTACCAGTACGAGGAAGATTACATTTTCTTGTTCTATTTTCATTAGTCCTTTATGGTAATTGATTCTTTT CCCCCTACAACTCAAGGTAACTCCCTCTCTCAAATCTTTTTAATCCTTTACGAAAAAATTTAATTTATTGATAACGCACA ACTTTCAAAAGGAAGTTGCAAGACTTGAAGGGGAGTTACGAAGCCTTGGACCTTCATCACATTCATGTCTATGGTCATTG TTACATGAAAAGTAGTTGAAAACTCAGCTGGTACAAAGTGCTTTCTTGGTCTTAACTTCCATATACTGGGGATCTGAATG CTGCAACAGATACACTTGATTGTGATGGAAGCACTGATGCTTCTCACCTTCACCTGGCTATAATAGGACTGAGTATGAAT CATGATAATGCCTTGAATACTTTGAAATAAATAGTTATGCTCTTGAACTTTTGCTCAAAATTTTGCTACATTTTTTTTTT TTCATTCTAGGCTATCCTTGGATATCAGCATGCAATCTTCATGTAAGCTATGTTTGCTTGTAGTATTTTGGTGATGCTAA TATCTTTGCTTATTGTTACTGTCTCAAAGGATCCTTTCATGTGGTAATATTTAATTTCAAAGTTTTATTGCAGATTTGTT AAAAATGGGTGGTTTGACCGGTTTCTAGTTGCAACTACATTCATTCTTTGTGGAGTGTTCATAATACTTAATAAGTAAGC AATTGCATATTATCTGTATATTCTGGTATTTTATCAGATTATAACAACCAGTGGAGCTGATATGATCAGTTTATTTTCTA TTACAGTTCAATGTCTGACACCTGTATGGCGATGGGAGAATGGGAGGAGAATCCACAAGCAGAATCTACTCTTAGCAACA TCCTTCCATGTGTTGATAAGAGAAGCACAAACAACATTTGAACATAGCTTTTGCAGCCATTGAAACCGGGATAACATGCT GCACACGCGGGGCTTTTCTTCCTAGTGTTTCCTCCAAGCACTCTCGAGTATCTACCCTCCATCCTTTGGCTTCAGTGTAA GAAAAATATAAGAATAGAGTTGCTATTTGAATGAGAAGGGCATGTTTGGTTTTCAGTTGAAAACTACATTCGGTGGATTG AAATTCGAGAATGCGCACTACAAGGCTTCGTAATGCGTGAAGCGTGAAAGGTACCTCGGACCTCCGTTGGTGTTCAATTG AGTTCAACTTAAAATCAAACATGCACAAGATCTTTCCACTTGGAAAATTCTGTTTTGCAGTATATTCTTACTTTATGTTG CTTCTTCTATGTGAGGTATTGTGATATGAGTTGTGACACTAAATTGAAGAACAGAAAATGAGTGTTTAAAATGAAGATGT TTGTAATGACAAAGTCTGAAATCAAGCTCCTTGTTTGGAGAAGCACCAAGAGTGGCATCCAAATCAACACTGAAAGTTTC AAAGACAAAGGGTACTTCACTCATAACCAAATGTGAAATTGGGGACAGTCTGGTTGGTTACTTACATACCAGAAAGTTCT CATCTGGGTCTATAGAGCTAAGGAGTTCGTGTGTTTAAACTCAGAAATTTTGGTTTCTACAAGTTTAAATTTGTTTGAAA TAAACGGATGTTGATGTTTGTGTATAGTAGGAGGGAGGTGATGTGGGCGGGATAGGTAGAGGCTCAGCCACAGAGTGCAT GAGCCTTGAAGCCTCAAGTAGAGCCTTGTCCCTTTTTCTCGTAGCTTGAACCAGCTTGTGAGAGAGCTCTACAACTGCCA CTTTCCATTGTTCTTATCTTGAATTTGTGTTAATGTATTCTATTATGTGCTGAATTTTCTACGATGTTGAGGTTGTGGTG GTTAAACCCGCTGTTACTATTTTTGACGAATTTCGCCATATAGATGTGGCGGTAAAAGTTG
CDS sequence (LotjaGi3g1v0340900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAAACCAACCAAGCACCAAATGCCAATTGGCTGTTGGGAGTTTTCTTGGGTCCAGTAGCCATAAATCACAGTTTCTT ACCTATTAGCTTTAAATGTTGGCCTCATGTACCGAAGGACTATATGGATCGTGTTTGGGATGAAATCATTAAGTCTAAGC TATGGTGGGACCCAGTCCATGATGGTGCAGCTAGAGCCTATGTGATGAAAGACCTAGGGAAAAAATGGACGGAACATAGG CTCAGATTATATAATGAACATTATGACGTGACAAAGACAAGAGATGAGAATATCCGGTTCCCCCCAAAAGGGATTGCAGC AACACAGTGGGCTTCTTTTATAGGTTATAGATTGGAGGAGAAAACTAAGGCAATATGTCAACAAAATTCCAAGAATAGAG CCAAACTTGCAATGAATCACACTAATGGCTCTACAAAACTCAAGAGAAAGCGGGCAGAGATAGAAAAAGTTGCTGAGATT GAGAAACATGGAACTGCTCCCAAGGAAATCTCACGTGATGACTCTCCTGATCAAGTTTTTGTAAGAGAACATCAAGGTGT GGGAGATGGATTTTTCCCGACACGAGTGTTTGGATCTAAATACCATTGCTTTTGTGGTACTTCTTCGAGCTTCAATAATA CGACTTTAGAAAGTCGTATTGCACACCTAGAGAATGAAATCCAGGAACTAAAGACTAAGTCAAAAACAAGAGATGAAAAT TTGAAGAAGATGGAGATGCTTCTTGTTCAACTACTTATGAATGCGTCATTGCCCATACCGTCTTTTCTCGCAACTAGCCT TGATGATGCTAAGACTTCTGATGATGATGCTTCTACTTAG
Protein sequence (LotjaGi3g1v0340900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
METNQAPNANWLLGVFLGPVAINHSFLPISFKCWPHVPKDYMDRVWDEIIKSKLWWDPVHDGAARAYVMKDLGKKWTEHR LRLYNEHYDVTKTRDENIRFPPKGIAATQWASFIGYRLEEKTKAICQQNSKNRAKLAMNHTNGSTKLKRKRAEIEKVAEI EKHGTAPKEISRDDSPDQVFVREHQGVGDGFFPTRVFGSKYHCFCGTSSSFNNTTLESRIAHLENEIQELKTKSKTRDEN LKKMEMLLVQLLMNASLPIPSFLATSLDDAKTSDDDAST
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 12 | 154 | 143 | 5.7E-32 | – | |
| PANTHER | 12 | 154 | 143 | 5.7E-32 | – | |
| Pfam | 107 | 157 | 51 | 7.4E-7 | ||
| Coils | 213 | 240 | 28 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0340900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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