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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0350300 |
| Transcript ID | LotjaGi3g1v0350300.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Cinnamoyl-CoA reductase; TAIR: AT1G15950.1 cinnamoyl coa reductase 1; Swiss-Prot: sp|Q9S9N9|CCR1_ARATH Cinnamoyl-CoA reductase 1; TrEMBL-Plants: tr|I1KVL4|I1KVL4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0350300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:72890321..72895353) extracted from Lotus japonicus Gifu genome v1.2.
ATGATGTTCACATGTGAACAATACTACTTTATAATATACAATTACCTGGCAACTACAAAAACTCAACTTCAATATGAATG GCGTAAAGAAGAAATATATTCCATAATAACTAATAAGGATTAGGTGGATACGTTTCCTTTATAAATGCAACCATTTCTCG ATAACCAGCACATACCATCTTCTTGACTCAAGAGAGAGCACATTCATCCTTCAAATTCTCTTCTCAACCACCATTTCATT TTTTTCTCACCTGTATAATCAGAGGAAGAAATTAAAAGAATCCAAGAAGATGCCGGCTCCTGCTGACACATCATCAGTTT CCGGCGATATCGTGTGTGTCACCGGCGCCGGCGGGTTCATTGCATCATGGCTCGTCAAACTTCTCTTGGAGAGAGGCTAC ATTGTCAGAGGCACCGTGCGAAACCCAGGCATGTTATATGTTATTGCTATATATACATGGCATGGCATGCAGTGCTTATT ACATGACATGTGTTTTTTCTTGCATGTTAAATTTGATTTATGTAAGGTTGTTTAGCTGAAATTTATGTTATTAATTTCAG ATGATCCTAAGAATGGACACTTGAAAGAGTTGGAAGGAGCCAAGGAGAGGCTAACTCTGCATAAGGCTGATCTCTTTGAT CTTGATTCTCTGAAAGCAGTCTTTCATGGTTGCGATGGTGTCTTCCACACCGCCTCCCCGGTCACTGATAACCCCGTGAG TTCTCTTTCTTTTCCCTTCAATGTTTTTTTTTTTTGAACTTTTTCCCTTCAATGTTAAAGGATTTATTATTGGGTGTTTG AAAAATTCTATTGCCTCTCCTTGTTTCTTTAGATAATTTTTTTTTTTGAAAAATAAAGGATTGTATATTATTATCCACAA AAAACCTCTAAGGACAAACCCTTAAGGAGCAAGGAAAACCAAAAAAAAAAAAAATGAGGCATCCCGTCGAACACACAAAA AAAACCCCAAATCGCCGCAAAACCCCCATCCAGGGCAAAAGCAAGGGCACCCTAAGACTACCCAACCACACCCGAGAGAA ACAAACAAAAATCAAGTTTTGAAATGTTCCTCATAAATCTTCTCCAACACTTGAATAGCTTCAAAATCGCTTTCCTCAAA TTCTAACCCCAAAACTTTTCCAACTAGCCACGTGTTGGAAAAGATAATTAGTACTAGTAAAATTATTCAAGTAAATATAA TATAAAATTATATTTCAACATATGCGTTAGGAAATTCTAGTTTGTCTCACGTGTTAAAATATTATTGGACTACATAAAAC TATGATTATAGTGATTTTACTTTATATTTACTTGGAGTAAATTATATAAATTTTTTAATTGGGAACTATATTTTCTAGAA ACAAATTTCAATGTTCTCACACATTGCCCATATGATCAGGGTCGGCCCTGGGCCTGTGCAGGCAGACCCACAACCCAGTG CCTCCAAAAAGAAGGGGTCCAAAATAAAATTCCCATTAAACTTTTTCAAAAAAAAATTTAACAGTTGTATTCAAGATCAG TTCTGTACTTCTGAATTTAAGAGCTTAATTAGCATTGGAATATGGAAGGTTTCATTGGGTTTTTCTATCTAATTCACTAG ATAAGTGGATATTAATTAGTGAACTAATCAACTTTAAAACGGCCCAGGGCCTCAAAAATGTCGGGACCGGCCTGCATATG ATACGAGCAGATCTTGGGGTAGACAAGAAGCCAAGATGTCAGTGTTCATTGTTATAGACAATGAATAAAAACATGACACC ACGTTAAAATAAAAATTATAAAGTCATAATTTTAAAGTTAAAAAATGCCACGTTCTTCTCTCTTCTTTCTTTCACGCGCC ATTTTCCCCTCCTCTGTAATTTTAATACTAGTAGCAGGAGCGCACGTATTAATTATGCACCACCACCATTTCCACACAAG CAAAATAAACAGAGGCAAATCCATACACAGGGCCAATAATAACACACTACATTAAAATAAAAATTGTCCCAATGATGTGT TATAGGACGCTAGGTTTGTGACTACAGTGAATTTAATTAGGAAGATGTGACTAGAGAGAAGTCACATCAGATCCCTTAAC AAGATTATCTCATATGATAACTAATTATATAAAGACCTAAACACTTTTACCCTAAAATTTCAACAAGTATAATCGATTGT GAAATTTTATTACATCATTTAAAAAATATTTCTTTAATTGTAATTAATTTGATCAAAGACTATTTTGATAATTTGACTAA AAATTAAAAACTATATATTCGAAGATCTAAACATGCATTTAATCAACACGAAATTAATCTACTTTGCAAAAATCTATTAA TGTTATCGCCACATTTATTTATGTTGTCTTATGCATACGACACTTTGAGTTTGTGATTTAAAAAAAATACAAACCATACT TTAAATTGTAATATGAAAACAATGCATACCGCATTTTAAATTGTGATATATATATATATATATATATATATATATATATA TTTTGTATTAATTTTCATACAGCGTATGCATTTTTGCTAATGAGTGGCATGAATCCGTACCACATAAACAACACACTTTT ATTTTATTTCCACAAGGGTTAGATTCTTAGAGACAATAGAATGGTTCAACGATACTCTGAGTCTGAGAGACCAATTCCAC CAGTTAAAAAACTCTGTTCTCTATGTCATTTTGATTCTATACATAACTGATGACATTGCCAGGAAGAGATGTTGGAACCC GCAGTGAACGGAGCCAGGAATGTAGTCATGGCAGCTGCAGAAACAAAGGTGCAACGAGTTGTATTCACTTCATCAATTGG GACAGTATACATGGACCCCAATAGGAGCAGAGATGAGGTGGTTGATGAATCATGCTGGAGTGATCTGGAGTACTGCAAGA ATACCAAGGTTCAGTTAAATATTAATATGACTAGTAATCTTTGCATGAAATGTGAATATTAGCATTAGTAATTAATGGAT GGTTAATTAATTTGCAGAATTGGTATTGCTATGGGAAGACAGTGGCAGAGCAAGTAGCATGGGAAGCTGCAAAAGAGAAA GGAGTGGACTTGGTTGTGGTGAACCCTGTTTTGGTTATTGGACCATTACTACAACCTACTATCAATGCAAGTACAATTCA CATTCTCAAGTACCTTACTGGCTCTGCTAAAACTTATGTGAATGCAACTCAGGCTTATGTGGATGTTAAGGATGCGGCAT TAGCCCATGTTCTTGTTTATGAGACTCCTTCTGCATCTGGTAGATACATTTGTGCTGAAAGTTCTCTGCACCGTGGTGAA CTTGTTGAGATTCTTGCCAAGTATTTCCCTGAGTACCCAATTCCTACCAAGTAAGTGTTTGTTGTTGTCTCTATAAACTT AAAGCTAAAAATTACAGTGCACAAAAGTAATTTTTATTCGATTTACTATTATCTTACATATTTTTATCACAATAATTTTT TTTCTGTATATCTAAACATGCCCGCTTATGTTAAGAATTTGGATCTTCTCTGGCGGCTTTCTCTATGTGCAGTTTAACTT GCAAAAGAAAATAAAAATTAAATAATTAGAGTCAAACAATTTGATAACCGGCCAATCTTTGACATGGATAGCCACATATA CAGAGTACAAATATATAAATGTTAAAAACATGGTGGAGATCTAGATGAATACAGAATGATAGGACTCTTAGTTGGTATAC CAACCTTGACTTCTCTACGTGTCCAGTTTCAAACTCTGGAGACTTGGAAAGTCGAGTCAAATTGAATCAAAGCCTCCGAA AAATTCAATGATTTTATAGGCAAAGACGAGTGGAGCTTACAATTTCAAATAGTATTGTCTTTACCAAACCCCTTGTCTCC TCTCCAACACTCAGGCAACCCTGAGACATGCTTAATTGATCATCTACTAATTTGTCTTTACCAATTTTAATTACCTAGCT ACATCTATTAATTGATACAAGGGCATTCTTAATCATCTACTAATATAGTTTTAAGTGTATGTAGTTGAGTGAAAGTGACC TGTGCTGCTTTAATAAATTTCTTAATTAGCAAAACCTAGTATTTGGAAACCGACAATCCAAGACCAAAATAAACATTTAT TGATGTTTAGAACTAAATTACAATTACGCTTGAAGTGTCACATTGTCTTGTAGATGAGAATTAGAGACACACTCTTTGTT ATTGTTTATTTTTTGAAAAATCAACATATTTCTCGAAGAAAGAATTTGGGTTTGGGAATATCTTTCACTCTAGACTTAAA CTAAACATGTTATTTCTTTTGTGCAGATGTTCAGATGAAAAGAACCCGAGAGTAAAACCCTACATATTTTCAAATCAAAA GCTGAAAGACTTGGGATTGGAATTCACCCCAGTGAAGCAGTGTTTGTATGAGACGGTTATGAATTTACAAGAGAAAGGCC ACCTTCCTGTCCTCATAAACCAACAAGAGTTGATCTAAGTTAAAATTATAATTAACAAGCTAGCTAGGCTATTTGTTTAA TTAATTCAGAGCAAAGTTGTGGAATATAAAGAAATACGTAATCTGAATTTGTAATACACATCTTGCAAATTGTTGCTTTG TCCGGAAGTGGTAGTACCAATGCATTTTCCCCACTTTTTTCTAATGGTGTACGTTTTGTCTATTCTAAGATTCTCTCGAT TCCAAAGTTTGGATGTCAACGAGTATGATATAATAGTACTTAATCTTCACATTTTTAAAGATGATTGTACTATCCCACGT TCATATTCCAGTTATTATGGTGAGGTTAAGGTCTATTTGACGCATCCAGCCACCATGTTGGGTATTGGGAGCCGCCTAGG AAGTGGCCTCGTGATAATGAGTGCATTTGTATTTTTGTAGGTATATATTTAAATGTATTTTTAGAAAATTCATGTCTCTT ATATTATTAAAAATATATTTTAAGCTAACCGGAACGTAAATTACAAACACACAGTGTTGATTGAGGTTGAGAATTGCATT TTGTTGGAGCTTAATTAACTCAGGGCATTTTAAGTCATAATATGTCATATTATGCATAATTTGGGTACGTAGG
CDS sequence (LotjaGi3g1v0350300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTATTAATTTCAGATGATCCTAAGAATGGACACTTGAAAGAGTTGGAAGGAGCCAAGGAGAGGCTAACTCTGCATAA GGCTGATCTCTTTGATCTTGATTCTCTGAAAGCAGTCTTTCATGGTTGCGATGGTGTCTTCCACACCGCCTCCCCGGTCA CTGATAACCCCGAAGAGATGTTGGAACCCGCAGTGAACGGAGCCAGGAATGTAGTCATGGCAGCTGCAGAAACAAAGGTG CAACGAGTTGTATTCACTTCATCAATTGGGACAGTATACATGGACCCCAATAGGAGCAGAGATGAGGTGGTTGATGAATC ATGCTGGAGTGATCTGGAGTACTGCAAGAATACCAAGAATTGGTATTGCTATGGGAAGACAGTGGCAGAGCAAGTAGCAT GGGAAGCTGCAAAAGAGAAAGGAGTGGACTTGGTTGTGGTGAACCCTGTTTTGGTTATTGGACCATTACTACAACCTACT ATCAATGCAAGTACAATTCACATTCTCAAGTACCTTACTGGCTCTGCTAAAACTTATGTGAATGCAACTCAGGCTTATGT GGATGTTAAGGATGCGGCATTAGCCCATGTTCTTGTTTATGAGACTCCTTCTGCATCTGGTAGATACATTTGTGCTGAAA GTTCTCTGCACCGTGGTGAACTTGTTGAGATTCTTGCCAAGTATTTCCCTGAGTACCCAATTCCTACCAAATGTTCAGAT GAAAAGAACCCGAGAGTAAAACCCTACATATTTTCAAATCAAAAGCTGAAAGACTTGGGATTGGAATTCACCCCAGTGAA GCAGTGTTTGTATGAGACGGTTATGAATTTACAAGAGAAAGGCCACCTTCCTGTCCTCATAAACCAACAAGAGTTGATCT AA
Protein sequence (LotjaGi3g1v0350300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLLISDDPKNGHLKELEGAKERLTLHKADLFDLDSLKAVFHGCDGVFHTASPVTDNPEEMLEPAVNGARNVVMAAAETKV QRVVFTSSIGTVYMDPNRSRDEVVDESCWSDLEYCKNTKNWYCYGKTVAEQVAWEAAKEKGVDLVVVNPVLVIGPLLQPT INASTIHILKYLTGSAKTYVNATQAYVDVKDAALAHVLVYETPSASGRYICAESSLHRGELVEILAKYFPEYPIPTKCSD EKNPRVKPYIFSNQKLKDLGLEFTPVKQCLYETVMNLQEKGHLPVLINQQELI
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 3 | 293 | 291 | 2.6E-119 | – | |
| CDD | 6 | 261 | 256 | 9.97446E-144 | – | |
| PANTHER | 6 | 287 | 282 | 6.2E-176 | – | |
| PANTHER | 6 | 287 | 282 | 6.2E-176 | – | |
| SUPERFAMILY | 14 | 274 | 261 | 5.83E-53 | ||
| Pfam | 19 | 205 | 187 | 5.6E-18 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. | ||
| Molecular function | Coenzyme binding | Interacting selectively and non-covalently with a coenzyme, any of various nonprotein organic cofactors that are required, in addition to an enzyme and a substrate, for an enzymatic reaction to proceed. |
Expression pattern of LotjaGi3g1v0350300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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