Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0351000 |
| Transcript ID | LotjaGi3g1v0351000.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Golgi SNAP receptor complex member 1; TAIR: AT1G15880.1 golgi snare 11; Swiss-Prot: sp|Q9LMP7|GOS11_ARATH Golgi SNAP receptor complex member 1-1; TrEMBL-Plants: tr|I3SYN2|I3SYN2_LOTJA Golgi SNAP receptor complex member 1; Found in the gene: LotjaGi3g1v0351000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:72994914..73004951) extracted from Lotus japonicus Gifu genome v1.2.
CTAGACTCAAGTGGTGCATTAGATAGCACGCAATCTTATTTAACTATTAAAAAACAAAAGTAAAAAACATTAAAAAAGAG AAAAAAGGAGGGATCGAGTCGTCTGTCTCGCGGGAGCAGGCGACCTGTCTTCTTCATCCCCAAACAACAAATAACAAGAT CAATTCACTACTCTTCGATCCAAACTTTCAGTTTTTCATCCTTGTTTCTCAACCATGGAGGTGCCTAGTTCATGGGATGC CCTTCGCAAACAGGTATCAATTTCCCCCGTTTTGACTTTTATTTCGTCAGATCATGCTTTTGATTGTGCTGTAAATGATG AAAATGATATCGGTATGCACAATTCGAATGCCCCATCATGCAAAAGTTCCGAATTTTCTTTCTGGGGTTTGTTCAATTTG TCGGTGATGGGAAATTCATGAGATGGGCTTCTACCCTATTGCTGCTATCTGTGGTTTCAACAAGATTTGGTTTGGTTTAT GAAGTGACTGGTTTTTAGTAGTGATTTTTGGGGTCAATTATGAATACTTGAAATGGTTCTGGTGAGAATTTTGCTCCTAG TTTTAGGTTCATTTTGATTTGGGACTGGAGGGTGATCTGGTTCTATGTGTTGTGATCTGCACTAAGATAGAGTGAATTTG AGTCAGATGAATGTTGTCTATAGGCACCTAATCAGGGTGATCATGGATGGTGAAGTGATATCTTCTTATCCATACAGTCT ACATGGATTGGGGTAGAAATAGAGCAGTACTTTATTGAGAAGTATAAGACAGATGGAAATCTTCATTTTATGAATGAGCA TTTGATGAAGTACTGATGGAATGCTTACATAATATGATGGGATTTTAGTTGCCTTGACTAGATAGATTTTTACAATCTTT AAATATTGAATTCATTTTTGTTTTTCTAATTTCATTGTTTGGGACATTAAGTTCCACCATCATGGAAAAGTGGTTATTAT ATTGAACAATTATGATTGCCGAGTAGGTGTCATTTAGCCTGTTTATATAACTTGGTTTCTGCTCCCTAATCATTATAGAT GAAAACTCATGGAATTTGATATTCTTAAGTGACTTGAAGGTTCATTCATTCAAGTTGTATTGTCTCCCTTTGTGGTCACC TAGTTTGGACATATTTTTGTTTTCTCAGGCAAATGATTGATAGAAAAATTTGATATTGTTGTGTGGCTTGAAGGTGCATC AATTCTATTTGATTTTGTCTCCCTTTGTGGTTACCAAATTATACCTAATTTTTCTTTCTTAGGTAAATGACTGATAACAG AATTTTTACCCCTGATTTTTTTCAGGCCAGAAATCTTGAAGCTCAGTTGGACGAGCGGATGAGTTCTTTTCGTAAATTGG TTTCTGCTAGTGTTTCTGCAAAAACTGATGCTGCAGAGAATGATCTAGAGTCTTGGATTGAACAATTACTAAAACAACTC CAACAAGTAAACTCACAGATGCAAGCTTGGGTATCTTCTGGTGGTACAGATATGGTTTCTCATACTTTGACTAGACACCA AGAAATTCTTCAAGATATCACCCAGGTATTCTATAGTCTGGGCTAGTGTTACCCTATATATGGTCTTATGCTGTTCATGG TGCATTCATTGTTTTGAATTGCTTTCTGTGTGCAAATAAGGGACAATGATTTAATTCTGACAAGAGTGGATCTGAAATAA GTATGTTCTACTTCTCCACTCCCATTTATGGGAAGTACATATTGTAGGAACTTTTTCCAAATGAAATTTATAAGTAAGTT TTTGTGTAACAAGAATCCTCCTTTTACATACAAATGATATGACAAAGACAAACTCCTTGTGACCGTCATTGGCGTTACTT CTTGTTAGAACCTTTTACTTGTGATTGAATTATTGTAAGCTAGTTGAGACATGATACATATTTTCTGAATCTTATTCTTT ATTATTTCTGTAGTTTGCTCTTCTTAGATATGTTGACATCAAGTAATTTTTTTTTATCTACTTAAACTTTTTGCACTGAG TTGGATGTAATTTGATAGAACTCAGGGTCCGCAACAAGCTAGTGATGCGCCTCTGATTGCTGATGGGGCAGTAGGGCCCA AAATATGGAAAGTATATTCTAGAAGGGGCAAGGTTGGCATGACTCATAGTTAGTTAGCCAAGGTGGTGACATGGGGAAAG AGAGTGAGAGAGGAAGAATCATACCATGTAATTAAAAGGAGTGTGAGGAGAGTGGGGGAGGGTATTCGGTTAGAATCTTA TTGTTAGAGAGCAGATTGCATTCTGTGCTATCTGTAGGAGCAAGGCTCTGGTCAGTGAAGGGGAATTCCATTTCCTCTCC TCTGTAATTCTTCATTCCATTTCACAATCAATACTAGAACTTCTCTCTTATTTCTTTCTTGTGTTCTTGTTTCCTGAGTT CATAAATTGGTTCCTAACAATTTGGTCCGACCTACCGGATCCAAATCGAGGAAGAGCCAGTGAATGCCATCCAAGAGACA GAACAAAGGAGCGAGCAAGGAGATGGAGGCGAAAATCGCGACGCTGGAAGCAGAGCTTTCTGGAGTCAAGTCGACGCTGA CAACGATGGAGCGTAACCAGGAAACGCTCATCGCGCTGCTTGAGAAATCCATAGGCAAGACGAAGGTCGATGATGATTCC ACCGGCGACAACGTGACCCCTGCGAAGGAGGCAGATCATGGGTCAGGATCGGGAAAGGGAAGTATGACCAGACTCACCGG AGATGTGCTGTCGGAGTTTCGACAGTCAGCGAAGAAGGTGGAACTTCCCATGTTCGATGGTGACGATCCCGCGGGATGGA TCTCGCGCGCAGAGGTCTACTTCAGGGTACAGGATACGCCACCAGAGGTGCGAGCTAGCTTGGCTCAACTGTGCATGGAA GGACCCACGATTCACTTCTTCAATTCGCTCCTTAGCGAAGAAGAGAATCTGACATGGGAACGCTTCAAATGCGCATTGCT GGAGTGCTACGGGGGCCAAGGTGACGGCGACGTTTACGAACAACTCACCGAACTCCGGCAACGGGGAACCGTGGAAGAAT ACATCACCGCTTTTGAGTACCTAACGGCGCAGATTCCTCGCCTACCTGAGAAGCAATTTCTGGGGTATTTTCTGCATGGA TTGAAGGGAGAGATTCGGGGACGGGTTCGGAGCATGGTAACCATGGCAGATTTAAGCAGGATGAAAATCCTGCAAATAGC GAGAGCTGTAGAAAGGGAGACGATGGGCGATGGTGGATCGGGTCATGCGCGCCCGACCCGATCGTCACTAGGAGGAAACC GGGCAAACGGATCAGGGTCCAATAGGAGCTCCGATTGGGTTTTTGTTAAGGGAAGCAAGGAAACGAACTCGGGCTCGGGT TACAATAACTCACGCGCTGGAGGGAATGGGCCTCGCAATGATAGACAGGCCCAACCTGAGAAGAACCGCTCCACACCCAG AGACAGAGGATTCACTCATCTCTCATACAATGAATTGATGGAGAGAAGGCAGAAGGGATTGTGTTTCAAGTGTGGGGGTG CCTTTCATCCTATGCATCAGTGCCCAGATAAGCAGCTGAGAGTACTGATTATGGAGGATGAGGAGGAGAAGGAAGGAGGG GGAAACCTTCTAGCGGTAGAGGTCATTGAGGAGGAAGAAAGTTCTGAAGGTGAGCTGAGTTCCATGAGTTTGTCTCAGGT GGAACAAGTAGGAAAGGACAAACCGCAAACTATCAAGCTGTTGGGTCTCATTCAAGGACTGCCAATTGTGATATTAATAG ATAGTGGGGCAACCCATAATTTTGTTAGCACTTCTTTGGTGCACAAGCTTGGTAAGACAGTAGTGGACACACCTTCCTTA AGGATCACTCTTGGAGATGGTTCTCAAGCAAGAACTAAGGGAAAGTGCAAGGAATTGATGATAATAGCCGGAAACCACCC TCTGTGTGTGGATGCCCAACTCTTCGAATTAGGGAATGTGGATATGGTGTTGGGAATAGAGTGGCTTAGAACCTTAGGGG ATATGATAGTCAATTGGGACAAGAAGACTATGAGTTTCTGGTCAGGACACAAGTGGGTTACCCTGCAAGGCCATGAGGAG CAAGAAGGGCTGCTAGTGGCATTGCAAACTATGATTAGTAGAGCTGGATTTTCAGGGTACCTTGGTAAGGAGAAGGTTCA ATTGGAAAAGGATAACAAGGGAGTTACTGGAGTTCAGCAAGCTGAGTTGGACATGATCCTGGAGAGACATTCTGTGGTTT TCCAAGCTCCAAAAGGCCTTCCTCCTAAAAGGAACAAACAGCATGCTATCACACTCAAGGAGGGTGAAGGTCCTGTGAAT GTAAGGCCATACAGGTATCCCCATCACCAGAAAAATGAGATTGAGAATCAGGTGAAGGAATTGCTGGAGGGAGGGGTTAT AAGGCACAGCACCAGCTCATTTTCCAGCCCTGTGATTTTAGTGAAAAAGAAGGACCATAGCTGGAGGATGTGTGTGGATT ACAGAGCTTTAAATAAGGCAACCATACCAGACAAGTTTCCAATACCAATCATAGAAGAGCTGCTTGATGAACTCCATGGT GCACGGTATTTCTCCAAGCTTGATCTCAAATCTGGTTATCACCAAGTGAGAGTCAAAGAAGAGGATGTACACAAAACTGC TTTTAGGACCCATGAGGGCCACTATGAGTTTTTAGTAATGCCCTTTGGCCTCATGAATGCACCATCAACCTTTCAAAGTC TCATGAATGATATTTTCAGACATCTTCTCAGGAAAAGGGTGTTGGTGTTCTTTGATGATATACTAGTTTATAGTAAGGAT TGGCCCTCTCATTTAGAGCATCTGCAGGAGGTTTTGGGTATTCTGAGAGAGCAAGGGCTGGTCGCAAACCGCAAGAAATG CCTGTTTGGAAGGGAAAAGGTGGAGTATTTGGGACATATGATTTCAGGTCAAGGTGTCGAAGTGGATCCCAGCAAGGTAG AAAGTGTCACCTCTTGGCCTACACCTAAGAATGTCAAGGGGGTGAGGGGTTTTCTGGGCTTGACTGGGTACTATAGAAAG TTCATCAGGGACTATGGTAAAATAGCAAAACCCCTGACTGAATTAACTAAGAAGAATGGTTTTGAATGGAGTGAGAAGGC ACAAGAGGCTTTTGAAACCTTGAAGAAGAAGCTGACTACTTCACCTGTGCTAGCTTTACCTGATTTCTCCAAGGAATTCA CCATTGAGTGTGATGCTTCAGGAGTAGGAGTAGGGGCTATACTGATGCAAGAGAAGAGGCCCATTGCTTATTTCAGTAAA GCACTAGGGGTGAGAAATCTCTCTAAATCTGCTTATGAGAAGGAGTTGATGGCTTTGGGGTTAGCAATCCAACATTGGAG ACCTTACCTACTTGGCAGACATTTCAAGGTGACTACTGATCAAAGGAGCTTGAAAGAGTTGCTACAACAGAAGGTGGTTA CTATGGAACAACAGAACTGGGCTGCAAAGTTGTTAGGGTTCGATTTTGAGATCAGTTACAAGCCAGGGAAATTAAACAAG GGAGCTGATGCTCTCTCAAGGGTGAATGAGACCTTGGAGCTGCGACAGATGGGCTCACATGTGGACTGGTTAGGAGGAAA GGATCTGAAGGAAGAAGTCAGTAAAGATGAAGAGTTACAACAAATAATTAAGTCTGTCCATGAGAAGAAAGATAGCTCAC TGGGGTACACTTATGAAAATGGCATTCTGCTGTATGAGGGGAGGCTAGTCTTGCCAAGGGAATCACCGTTGATTCACACC ATGCTTACTGAATTCCATACCACACCACAAGGAGGGCACTCAGGGTTTTATAGAACCTACAGAAGATTGGCTGCCAATGT GTATTGGAGGGGAATGAAGTCTGCTGTTCAAGATTTTGTGAAGCAGTGTGATGTGTGTCAAAGACAAAAATACCTTGCAA GCTCTCCAGGAGGTCTCCTCCAACCATTGCCCATTCCTGAGAGAATTTGGGAAGATTTGTCTATGGATTTCATAACTGGA CTTCCCAAATCTAAAGGGTTTGAAGCAATTTTAGTGGTGGTTGATAGACTCTCTAAGTATGCACATTTCATCCCTCTCAA GCATCCTTACACAGCAAAGAGTGTAGCTGAGGTATTTGGGAAGGAAATAGTGAGATTACATGGGGTACCTTCTTCTATTG TAAGTGATAGAGACCCTATCTTTGTAAGCAATTTCTGGAGGGAACTGTTTAAGCTTCAAGGAACCAAATTGAAAATGAGT ACTGCTTACCACCCTGAATCTGATGGGCAATCAGAGGTGGTGAACAGGTGCCTTGAAACATATCTGAGATGCTTCATAGC AGACCAACCCAAGACTTGGGTCATCTGGATACCTTGGGCTGAGTATTGGTACAATACTTGTTTCCATGCCTCTACAGGTG TGACCCCTTTTGAAGTAGTCTATGGAAGACCCCCTCCCACTATCACACGTTGGATACAAGGAGAAACCAGAGTAGAGGCA GTACAAAAAGAGCTGTTGGAACGTGATGAGGCTTTGAGACAGCTAAGGCTACAACTGGCAAGGGCACAGGATAGGATGAA GCAATTTGCTGACAGAAAGAGGAGTGACAGGAGCTTCAGTATTGGAGAATGGGTTTTTGTTAAACTCCGGGCCCACCGCC AGAAGTCAGTGGTCACAAGAATCTATGCCAAGTTGGCAGCCAAGTATTATGGTCCTTATCCTGTGGTAGCAAGGGTGGGA GCAGTAGCATATCAGCTTAAATTACCCCCTGGATCCAAGGTGCATCCAGTTTTCCATGTATCCCTCTTAAAGAAAGCAGT GGGGACTTATCATGAAGGAGAGGAACTTCCTGATCTGGAGGGAGATGGGGGAATCCTCATTGAGCCTACTGAAGTATTGG CTACCAGAACAGTTCAATTACAAGGGCAATCTATCAAGCAAATCCTCATCCAATGGAAAGGGCAGCAACCAGAAGAAGCT ACTTGGGAAGATGTTGATATGATTAAAAGTCAGTTTCCTTCTTTTTGCCTTGAGGACAAGGCAAGAGCTTATGGAGAAGG CATTGATAGAACTCAGGGTCCGCAACAAGCTAGTGATGCGCCTCTGATTGCTGATGGGGCAGTAGGGCCCAAAATATGGA AAGTATATTCTAGAAGGGGCAAGGTTGGCATGACTCATAGTTAGTTAGCCAAGGTGGTGACGTGGGGAAAGAGAGTGAGA GAGGAAGAATCATACCATGTAATTAAAAGGAGTGTGAGGAGAGTGGGGGAGGGTATTCGGTTAGAATCTTATTGTTAGAG AGCAGATTGCATTCTGTGCTATCTGTAGGAGCAAGGCTCTGGTCAGTGAAGGGGAATTCCATTTCCTCTCCTCTGTAATT CTTCATTCCATTTCACAATCAATACTAGAACTTCTCTCTTATTTCTTTCTTGTGTTCTTGTTTCCTGAGTTCATAAATTG GTTCCTAACATAATTGAAATCCAGGAGTTTTATCGTCTTCGCTCAAGTCTTCGAGCTAAGCAAGAGCATGCTTCACTATT AGAGGATTTTAAAGAATTTGATCGAACAAGATTAGACTTGGAAACAGGTGCAGGATCTGAACAGCATGCACTCCTTAAAG AACGTGCATCTATCAGCCGGAATACAGGACATGTCAGTGTTATCTAACAATTACTTTACTTTTGTGATATTAAATGCCAT TTTCTTTCTTTAGTTTAGATATTTCCAGTGGTAGTCATACTGTTATATTTTATTATGTATGAAACTAATTAAAACTTCTC TCCTGCCAATAACACATCTATTTGGATATTGACTACTTTTTCTTTAGCTGGATTATGTTGCAGGCTTTGAAACGGGCAAG TCACGTGCAAGCATAAAAAAAATTATATTAACTCATTAGGGTTGTTGAGATCCTACATGGCTACATCACCTAGAGATATA ACCGAAGTATGTAGCTTATAACGGCATGTGCAATCCTCACCTTATGAGTTAGCTTTTGAGATAGGGTTAGGCCTTGCCAA AATTTATGATGCACCCACAACTGTCTAAAATCAACCTAGTCCAACGGATTTCCCAATAAAATCTACCTGGCCCTGCAAAT TTCCTAGTGCAATCAACAAACATTAAAAACCAGTCTTACGATTTCCATGCTCCATATGCCCAGTTTGGGGTATTAGAGGG TGTGTTGAGATCCCTCATTGACTAAAGATATGACTAGGGAGAGCTTATAAAATTTTGGACCAACATGAGCTAGGTCTTGG TCAGAGTTAAATCTAACGAGTGCCATGAACCAACAATCCTAAAAATTTAAGCTATTGGGTGAAAACACATGAATTATTTT ATTTTTACAACACATGCCCTCACGAACACCATTTGGGCTTAACTTCTTATTAGAAGAATGGAGGTAAGAAAGATCTCTAG ATTACTTGGTCATAGAAGCTATGACACCATGTCCTGAATCAACTATCTCTAAAACGTAAACTGTAAGGTAAAGACGCATG AATGGTTTTTATATTATACCTGTTTAGGAAAAGAATATAATAATGTTTGATGCTGGGATGAAGAAGGGATTTGGGCCATG AGAATTGGGTGAATATCTTGTTAAAACTTCAGGATTGCAATTTATTATTACTTTTTCAAATCAAACTTCAGATGTGAAGA TTTCTATAAGGAGGAGAGTTTAATGCTAAAAAAACAACGGGATGCTATTATTGGAATAGTGGATTGTGCTCTAGATTTTT TTATTCATTTAGTTGTTTATTTAATTTGTAACTTGATCTAATCAGCGTGGGTTTAAGAAACTGCTTTTGAGCCCCATTAA ACAAAAGCCTAGTTCTTTAAGTATATTAATGCTGAAATGTTAGAATTAAAAAAAAGTATGTTAAGGCTTTTTTGGAATTT CGTATGCAGGAAATGCTTAACACGCCTTACATTTGGGACATGTCTTCGTTTTATTTTTCTTTAAAATTCTGCCTGTTCTT CAATTGGGAATAATATTGTTTTGAACTGTTCTGCTCGTTCCTGTGCTGCAGGTGGACACTGTTATTTCACAAGCACAAGC AACACTCGGTGCGCTTGTCTTCCAGCGTTCAACATTTGGTGGCATCAATTCAAAGATCAGCAATGTGAGCGGTCGCCTCC CAACGGTACGACTCTAATCCGTTTCCTTTTTACCATCTATGATTCTACATCCTGCATTGTGTTGTGACTTGTGAGATTGA ATAAGAAGTACCCAATAAAAAGGCATCGAATAATGATGTTAATTTCTTCGTGAAATAGTTTGGTAGATTTCAATTTCATG AGAACTGCTGAAAGATGTTGTAGTTTTTAGTCTGCATGAATGTTGTATTGCTTAGAAATCTGCTGTTTAATATAACTGCT TTCAATAATATAATGCAGGTAAATAGCATACTCGGGGCAATAAAGCGAAAAAAGTCAATGGATACCATTATACTCTCTCT TGTTGCATCTGTATGCATATTTCTCATTTTCATCTACTGGCTAACCAAATGAGGCTGTTTAATATGGTGGGTGCTCAACT TGTGTAAACCGTTCCATGTTCCATGTCTATTGGGCTTAGTAGCTTGTGTCATGAAAAAACTACTTTTTTGGGGTAGTGTA TTTGTTCATTTGATTGTTTATCCTTGTATCAGAAGCAATGCCGAGTAAAAATCAAGAAATTCATCCTTCCATTTCTTGGT TCTGATATCATAGATCATATATAGCATGTAGAAAGTGCGTAAAAATATCAAATAAATTTCAGTAAGTGGTACAGATTGGA AATAGGAGGCCTTATCAATATTGTTGTGGCAGAATTGGTTCTCTTAGTAACTCCATTATTATTGCAACTTCAGCTATTGT CATGACTTGTAGACAACAACAACTCATCCTTCCAAATTCATGTCACTAACGTAAAAACTCATCTTTCAATACTTTTTTTT TTTTTTGTAATTTACATCATTTATGGTCTTGGTCTTTGATAAAAAAGACTTCTATTCAAAAACTAAAAAAAATTTATATT ATAAAAAGTAAATGAAATTGACTACAATATTTAACAAG
CDS sequence (LotjaGi3g1v0351000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGGTGCCTAGTTCATGGGATGCCCTTCGCAAACAGGCCAGAAATCTTGAAGCTCAGTTGGACGAGCGGATGAGTTC TTTTCGTAAATTGGTTTCTGCTAGTGTTTCTGCAAAAACTGATGCTGCAGAGAATGATCTAGAGTCTTGGATTGAACAAT TACTAAAACAACTCCAACAAGTAAACTCACAGATGCAAGCTTGGGTATCTTCTGGTGGTACAGATATGGTTTCTCATACT TTGACTAGACACCAAGAAATTCTTCAAGATATCACCCAGGAGTTTTATCGTCTTCGCTCAAGTCTTCGAGCTAAGCAAGA GCATGCTTCACTATTAGAGGATTTTAAAGAATTTGATCGAACAAGATTAGACTTGGAAACAGGTGCAGGATCTGAACAGC ATGCACTCCTTAAAGAACGTGCATCTATCAGCCGGAATACAGGACATGTGGACACTGTTATTTCACAAGCACAAGCAACA CTCGGTGCGCTTGTCTTCCAGCGTTCAACATTTGGTGGCATCAATTCAAAGATCAGCAATGTGAGCGGTCGCCTCCCAAC GGTAAATAGCATACTCGGGGCAATAAAGCGAAAAAAGTCAATGGATACCATTATACTCTCTCTTGTTGCATCTGTATGCA TATTTCTCATTTTCATCTACTGGCTAACCAAATGA
Protein sequence (LotjaGi3g1v0351000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEVPSSWDALRKQARNLEAQLDERMSSFRKLVSASVSAKTDAAENDLESWIEQLLKQLQQVNSQMQAWVSSGGTDMVSHT LTRHQEILQDITQEFYRLRSSLRAKQEHASLLEDFKEFDRTRLDLETGAGSEQHALLKERASISRNTGHVDTVISQAQAT LGALVFQRSTFGGINSKISNVSGRLPTVNSILGAIKRKKSMDTIILSLVASVCIFLIFIYWLTK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 203 | 203 | - | – | |
| PIRSF | 1 | 223 | 223 | 9.2E-72 | ||
| PANTHER | 3 | 222 | 220 | 7.2E-93 | – | |
| PANTHER | 3 | 222 | 220 | 7.2E-93 | ||
| Coils | 51 | 71 | 21 | - | – | |
| Pfam | 135 | 199 | 65 | 1.5E-17 | – | |
| TMHMM | 204 | 223 | 20 | - | – | |
| Phobius | 204 | 223 | 20 | - | – | |
| Phobius | 224 | 224 | 1 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Golgi membrane | The lipid bilayer surrounding any of the compartments of the Golgi apparatus. | ||
| Cellular component | Cis-Golgi network | The network of interconnected tubular and cisternal structures located at the convex side of the Golgi apparatus, which abuts the endoplasmic reticulum. | ||
| Biological process | ER to Golgi vesicle-mediated transport | The directed movement of substances from the endoplasmic reticulum (ER) to the Golgi, mediated by COP II vesicles. Small COP II coated vesicles form from the ER and then fuse directly with the cis-Golgi. Larger structures are transported along microtubules to the cis-Golgi. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
Expression pattern of LotjaGi3g1v0351000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…