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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0357900 |
| Transcript ID | LotjaGi3g1v0357900.3 |
| Related isoforms 6 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | O-fucosyltransferase family protein; TAIR: AT1G52630.2 O-fucosyltransferase family protein; Swiss-Prot: sp|Q8W486|Y1491_ARATH Uncharacterized protein At1g04910; TrEMBL-Plants: tr|A0A151SGX5|A0A151SGX5_CAJCA DUF246 domain-containing protein family; Found in the gene: LotjaGi3g1v0357900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:74009188..74011096) extracted from Lotus japonicus Gifu genome v1.2.
TTTCAACTCCAGGTCCTTAGAACATGTTTAGTGATCTTTCTTCTTCCTTTTTATTGAGATGAAATCTACAATGACTGCAG TTTTGTGATGGTGTGGGCATTGCTCGTCTGTTAAATGCAACTCTTGTCCTGCCGAAGTTTGAAGTAGCTTCATATTGGAA TGAAACAAGGTAATTCATCTTTCCATTTCTATTGCATTGTTTTTAATTTGCATTTTCAGACTGGAAATTATAATTATAGA TTGGTTAGTAAATTGGGTTGTCCTGTCATCTAATGCATGCTATTCTAACTTTCATGGTTCTGTTTATCTTAATCTTGCTG AAAAAACTTTTGAATATTGGCTATTTCAGTGGTTTTGCGGATGTATATGATGTAGACTACTTCATTCAGCAGATGAATGG CTTTGTCAAAGTCATAAAAGAGTTGCCCCCTGAGATTGCATCAAAAGAACCCGTTCAAGTGGACTGTAGCAAACGGAAAG GTCAATTTGATTATGTAGAAAGCGTTCTTCCATCTCTGTTGAAACACAAATACATTTCCATCACACCAGCAATGTCCCAA AGAAGGGACAGGTATGCTAAGCATCTCACTTCTGTCTACTACTTTGTGATAACTCATAACTCTCTCATTTTTAGTTCTAA GACCAGAATTTAATTGCTCTTAAAACATAAACACTTTGGATATTGTTGGTTCAATAATTTCTTGCTGAATGAGCTTTTGC TTCCATACTTTCCTTTTTTTTTTCTCTTTCCTGTATTTTGATTGGAGAATGTCACTTTAATTTGCCAGTGCACATATGAT GGCTATATTCTCAACATTTCATTGCGCGCTTATTTCTGACAGCCTTTGTCATCATCCATTATCATTTCGTCAACCATAAT ATGTAGTATCTATTATTGCTATGAGCTTGTCCAAAAAGTTTCCTCTGCTGCTCATATATGATGTTTCCTGTTTAATACTT TCAAGAATAATTCAGTTGTAACATTTGATGTCTCATACAACAAATGACTGTGCAAGCAACTTCTGTCCTCATGAAGCCAA ATCACTTAAATTAAATAACAAAATGAATGTTATTCAACATCCAGAAAGAATAAACAGTTGTGAAGAATTCCCCCTTCTTC CATCCTCCCTCCTTCATTAAGAATTGTAATTGAATTTATTTCTCCTACCTTTGCAGATACCCTTTGTATGCAAAAGCTTC TCTCTGTCAAGCTTGTTACAAGGCATTACGTCTCACCAGAGTGTTGGAAATGAAAGCCTCTAAGCTTCTAGATGCAATAC CTAAACCCTTTTTGTCGCTTCATCTTCGTTTTGAGCCTGACATGGTTGCATACAGCCAGTGCCAATACCCAGGCCTTTCG CCTGCTTCCATCAAAGCCATAGAAGCAGCACAAGTGGACAGAAAACCATGGACTGGTGACTTAGCCCGCATATGGAGACA GCGGGGGAAATGTCCCCTTACACCTAATGAGACAGCTTTAATACTTCAAGCTCTTTCCATCTCACCAACCACAAATATAT ACTTGGCTGCTGGAGATGGTTTGATGGAAATTGAAGGGTTAACAGATACTTACACGAAAATATATACCAAGTCTAGTCTT CTCAGTGGGGAAGACTTCACTAGCATGCATGGCAATACAAAAGCTGCTTTGGATTATTATATATCTATTAATAGTGATTC CTACATAGCTACATATTTTGGAAACATGGACAAGATGGTTGCAGCAATGAGAGCTTTCAAAGGGTTGTACAAAACTATGT TTTTGAGTAGAAAAGGCTTTGCAGAATTAACTTCACGGGGTCTCAGGGGGAAGGAATTGATGCAAGCCCTATGGAAGGTT CACAGAGATGAGTTTGTCATGGGAAGAGGCTCTGCTCTGCCCGAGTGTTTTTGCGAATTCAAGTTGTGA
CDS sequence (LotjaGi3g1v0357900.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAATGGCTTTGTCAAAGTCATAAAAGAGTTGCCCCCTGAGATTGCATCAAAAGAACCCGTTCAAGTGGACTGTAGCAA ACGGAAAGGTCAATTTGATTATGTAGAAAGCGTTCTTCCATCTCTGTTGAAACACAAATACATTTCCATCACACCAGCAA TGTCCCAAAGAAGGGACAGATACCCTTTGTATGCAAAAGCTTCTCTCTGTCAAGCTTGTTACAAGGCATTACGTCTCACC AGAGTGTTGGAAATGAAAGCCTCTAAGCTTCTAGATGCAATACCTAAACCCTTTTTGTCGCTTCATCTTCGTTTTGAGCC TGACATGGTTGCATACAGCCAGTGCCAATACCCAGGCCTTTCGCCTGCTTCCATCAAAGCCATAGAAGCAGCACAAGTGG ACAGAAAACCATGGACTGGTGACTTAGCCCGCATATGGAGACAGCGGGGGAAATGTCCCCTTACACCTAATGAGACAGCT TTAATACTTCAAGCTCTTTCCATCTCACCAACCACAAATATATACTTGGCTGCTGGAGATGGTTTGATGGAAATTGAAGG GTTAACAGATACTTACACGAAAATATATACCAAGTCTAGTCTTCTCAGTGGGGAAGACTTCACTAGCATGCATGGCAATA CAAAAGCTGCTTTGGATTATTATATATCTATTAATAGTGATTCCTACATAGCTACATATTTTGGAAACATGGACAAGATG GTTGCAGCAATGAGAGCTTTCAAAGGGTTGTACAAAACTATGTTTTTGAGTAGAAAAGGCTTTGCAGAATTAACTTCACG GGGTCTCAGGGGGAAGGAATTGATGCAAGCCCTATGGAAGGTTCACAGAGATGAGTTTGTCATGGGAAGAGGCTCTGCTC TGCCCGAGTGTTTTTGCGAATTCAAGTTGTGA
Protein sequence (LotjaGi3g1v0357900.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MNGFVKVIKELPPEIASKEPVQVDCSKRKGQFDYVESVLPSLLKHKYISITPAMSQRRDRYPLYAKASLCQACYKALRLT RVLEMKASKLLDAIPKPFLSLHLRFEPDMVAYSQCQYPGLSPASIKAIEAAQVDRKPWTGDLARIWRQRGKCPLTPNETA LILQALSISPTTNIYLAAGDGLMEIEGLTDTYTKIYTKSSLLSGEDFTSMHGNTKAALDYYISINSDSYIATYFGNMDKM VAAMRAFKGLYKTMFLSRKGFAELTSRGLRGKELMQALWKVHRDEFVMGRGSALPECFCEFKL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 303 | 303 | 3.5E-177 | – | |
| PANTHER | 1 | 303 | 303 | 3.5E-177 | – | |
| Pfam | 2 | 247 | 246 | 8.9E-30 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0357900.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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