Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0362600 |
| Transcript ID | LotjaGi3g1v0362600.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Ras-related GTP-binding protein, putative; TAIR: AT5G54840.1 Ras-related small GTP-binding family protein; Swiss-Prot: sp|P87027|SPG1_SCHPO Septum-promoting GTP-binding protein 1; TrEMBL-Plants: tr|I1JJ70|I1JJ70_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0362600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:74705892..74709810) extracted from Lotus japonicus Gifu genome v1.2.
CACACATTGGGGGTATGATTAAAGAAAGATGGTATACTTGCCTTTTTCATGTAGAGTTACCAAAGTGTCGATTCCAACGT AGTTACCTAGAAGGCGGCAAATTTGGAGCGTTTAGAAAACGGAACTGAAAAGTACCGGTCAACTGTCCCTTCTATTAAAC AACAACCAAACCTCTTCCACTGGTCTCCTTCTGGTCCTATGATAGTTAGCCACCACCAAAAACCAAAACAACAAGAAAAA AGAAGAACAGAGCAAGAAAAACAGAGCAAAAAACAGAGCAATCTTCCATCACATGTGAATCTTCTTTTCAGAACTATGGT GAAGATGATTCAGGATACAACCAGAAAGATGTCACAGCTCTGCCGGAAAATTGTTCAGGTGGAGGTTCGGTGGGGAGTGC TACAAAGGGTATCTTTTGTTGGAGAGTTTTTCAGATTCATATGGGACAGGCTTATGGTTTGCTCCGTCAGGAGACAACGG CCTATGTACCGGAGACTGGCGTTCCGGGATTCGCCGGCGGTGGACTCCGTTGACGACGGTGGATTCCTGCAGGAGCTTGC CGATAGCGGCGGGTATGACACCGATTCGGATTTGGTGAACCTGAAGATTAGTTTGTTGGGTGATTGCCATATTGGAAAGA CCACTTTTTTGGTGAGCAAAATTCTCAACTTTACTAAGTGGTTGTTTGGATCAGGTTTTTTTTGTCTCTAGAATCAATTT TGACACTGAGAAGTTATTGCTGCTCAAATTAAGTTTTTCAGCATAATTAATTGCATGGTTGGATATACGATGAAAATCAT GGTGAAATCAAAATCATTGTGAATGATCACAAAAGTTAAAAGAGGTTGTTTTTGTTCTTCATGAGCCAAAGCTAGCTCAT ATATTGCGATTTTCCTTTGTGTATCCAAACATGCACGTGTGTAGCTTTGAGTTTAGCTTCCTAGAGGGAGAGAATTGATT TTGGGTCTCTGAAAGCTTATCCAAACATATTATTACTAGGTGTTTGGTTTCACAATTTATACAAAATCGAAGTCAAATTT ACCCACAAGCTAAAATTTGTAGCTTTTAAACACGAGTGATTCTACATCAAACATACTAGTACTACAAATTCCTTTATTTT CATTCTTTAGCAGTGAGTGCTTTAGAGCTAACTCCAATTTTCTCAGATCAAGTATGTAGGGAATGAACAGGAAAAGAGGA GCTTGCAAATGGAAGGACTGAATCTAATGGACAAAACATTGTCTGTTCAAGGAGCTCGTATTTCATTTTCTATATGGGAT GTTGCAGGTGCTTTTTGGTTAAACTTTCTTTTTCTATGTCACTATGCTCTTCATTTACTTCTTGTTTTTTTCTCTTTTCT TTTGTGGGGTTGATAATTGAATCAGTTCAAATTTTTATATGTAGGTGATAAAAGTTCTCGGGATCAAATTCCTATGGCTT GTAAAGATTCAGTTGCTATTTTGATCATGTTTGATCTCACTAGTCGTTGCACACTTCACAGGTAGGCTGAGAAATTCACA CCTATGCTAAGTTCTGTTGGAAACAATTTTTAGCAACATTATGGTAGAAAACTAGAACTAATTTTATGTTTTGTACTTTG CTTTGTTTGTGCAGTGTTGTTAGATGGTATAGTGAAGCAAGAAAGTGGAATCAGGTACCTGAGAGATTTACTATCTTAGT TTCTTTGATAAAGTAAATGCCACTAATTAAAGTCATTAAGAGAAAAGCTTTGAAGTAGTACAAATATTGGATAAAGTAAC TACATTAAAATTATATTGATGAGGCTTTAGTAAATCATTATGACCAGTAAGTGACATTAATTGTCATTTTTTTTGAAATG ATTAATTGTCATTAACATGATTTGTGCTGATTATTTACAAGCTGATGTGTGCTATTTATTTATTTTTATATCAAAATAAT TGAGTAGATAAATTCCAATTTTGATTTACTTTTGGTCAAAATCTCTGACCATCATTTTTCACTTGCAGAATGCAATTCCC ATTCTGATAGGAACCAAGTTTGATGATTTTGTTAAATTCCCCCCAGATTTGCAATGGACCATTGTAACACAGGTAAATGA ATAATAATTAATGGGTCTATTCGGATTTAGCTTATTTAAAATGAGATACACCATTTTGAAAGTAAAGTAAGTAAGTAATC ATTATGCTAATTAAAAAATTAATGGTTTAAAATTTAAAGAATTTCATAGTTATGCATGTGCAAGTTTATAATAACAATCC TGATCGTTAATTCTCCGTCAATTAGTTACACAGTTACTGTTCAAAAAAAATATTAGTTACACAGTCACTTTATAATAGTC AAATCCTTGTTGTAGCATGTTTGGTTTCACCGCTTGCACATCGAATGCATGTTTAATTAGAAGTGGTTGCTTATAACTAA AATTGATTCTAGAGCATTTCACTATGGAGCCAGAACCTAACATGTTATTAATCATAGATGCGCTAGACTGCTTTACTTGT CATTTCATTTCCCAAGTGATGCGTGTGTAAACCTTTGATTGACTAGGGTACAAGAAGAATTATTCTAGTATAATAAATAG AAGTCTTTAATGGAGTCTCAGCATTTGACAACTACTACCAAATTCTATTCCTTTCCGCGTTTAACAAACATCAAATTTTG GGGCCTACATGTTAATTAAAGTCAGATTAATATGCTCGCACTTTATTACTTTATATTGCATAAACTCACATTCCATTGCT TTAAATAAAAGTGTTATGCTTATCTAAAAAAAAATAAAAGTGTTACTTTTTTATCACATTCCTTGGCATTTCAAAATTGA ACTTACCATATGGCACATGCATACAGGCAAGGGCTTATGCAAGAGCAATGAAGGCAACCCTTTTCTTTTCAAGTGCAACC CACAATATCAATGTCAACAAAATTTTCAAGTTCATCATGGCCAAGCTCTTTAACTTGCCATGGACGGTAGAAAGAAATTT GACTTTGGGAGAACCCATAATTGACTTCTGAAATATTCAAATTTTGATTCCTATGTACATGGCAGAACAGAGGATATAAG AAAAGAAAAACACAGAAGAAAGAAACCAAATTGGACTTTTCATGTTGATTGAGATCTAGGTAGGGCCTGTTTGGGATAGC GTTTTGAGTATCAAACGTGCGTTGCGTTTGCCGAAACGTCGTTCCGAAACTTTTCGTCCCTATTTGGATGAGCGTTTGCA GCAACGCAAAAACGCTAAAAGTCACCAAAACAGTGTTCTACTGGAATCGATAATTTGGAGCGTTGGGCGTTGGAGCGTTA GGCGTTGGAGCGTTCGACCGTTGAAAGGAAGGCATAAATTTGATTTTTGCCCCTTCATCCATGGTACCTTCCTTGTCTTT GTTCATTTCGCCCATGTCATGCTCGATCCTGGTCTGGAACTCGCATCTGTGCTCGATCCTGGTATCTGGAACTTGCCTCC ATGCTCGATCACAATCTGGAAATCGCACGTTCTTCGCTTGTGACCATGTTATCTGAGCTTCCAGCGTATCTAGGAGGAAG AAAGATGAAGAAGCTCCTCTGGTATAGTCGGTTAGTTGAGTCTAGAAGCTCCTCTGGTATAGGGAAAATTGAATTATAAT TTGAGGTCCTGAGAGTTCTTTTTTTTCTTTTTTCAACCAGAGAGTTCTTTTCATTTTGTACACTTTCTTTAAAAATTATA AAATAATAGAAACCACAATTGTTTATATATAATTCAAACACCACGTTTCCAACGGAATCCCAAACGGGCACTTAGTATAG GTTGTTTTTCAATAGGCCATTTTGACTAAACATCTTTACAGAGCTACTTGTGAAGGTGGGTTTCAGTTTTCTTTAGCTGC AGTTACCGAGTATAAATCTTTCTACAAGTGATTCAACATTCAAAATTAATTGTGGGAGAAAGGTTAGGTGAATAGTTCC
CDS sequence (LotjaGi3g1v0362600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATAGTTAGCCACCACCAAAAACCAAAACAACAAGAAAAAAGAAGAACAGAGCAAGAAAAACAGAGCAAAAAACAGAG CAATCTTCCATCACATGTGAATCTTCTTTTCAGAACTATGGTGAAGATGATTCAGGATACAACCAGAAAGATGTCACAGC TCTGCCGGAAAATTGTTCAGGTGGAGGTTCGGTGGGGAGTGCTACAAAGGGTATCTTTTGTTGGAGAGTTTTTCAGATTC ATATGGGACAGGCTTATGGTTTGCTCCGTCAGGAGACAACGGCCTATGTACCGGAGACTGGCGTTCCGGGATTCGCCGGC GGTGGACTCCGTTGACGACGGTGGATTCCTGCAGGAGCTTGCCGATAGCGGCGGGTATGACACCGATTCGGATTTGGTGA ACCTGAAGATTAGTTTGTTGGGTGATTGCCATATTGGAAAGACCACTTTTTTGATCAAGTATGTAGGGAATGAACAGGAA AAGAGGAGCTTGCAAATGGAAGGACTGAATCTAATGGACAAAACATTGTCTGTTCAAGGAGCTCGTATTTCATTTTCTAT ATGGGATGTTGCAGGTGATAAAAGTTCTCGGGATCAAATTCCTATGGCTTGTAAAGATTCAGTTGCTATTTTGATCATGT TTGATCTCACTAGTCGTTGCACACTTCACAGTGTTGTTAGATGGTATAGTGAAGCAAGAAAGTGGAATCAGAATGCAATT CCCATTCTGATAGGAACCAAGTTTGATGATTTTGTTAAATTCCCCCCAGATTTGCAATGGACCATTGTAACACAGGCAAG GGCTTATGCAAGAGCAATGAAGGCAACCCTTTTCTTTTCAAGTGCAACCCACAATATCAATGTCAACAAAATTTTCAAGT TCATCATGGCCAAGCTCTTTAACTTGCCATGGACGGTAGAAAGAAATTTGACTTTGGGAGAACCCATAATTGACTTCTGA
Protein sequence (LotjaGi3g1v0362600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MIVSHHQKPKQQEKRRTEQEKQSKKQSNLPSHVNLLFRTMVKMIQDTTRKMSQLCRKIVQVEVRWGVLQRVSFVGEFFRF IWDRLMVCSVRRQRPMYRRLAFRDSPAVDSVDDGGFLQELADSGGYDTDSDLVNLKISLLGDCHIGKTTFLIKYVGNEQE KRSLQMEGLNLMDKTLSVQGARISFSIWDVAGDKSSRDQIPMACKDSVAILIMFDLTSRCTLHSVVRWYSEARKWNQNAI PILIGTKFDDFVKFPPDLQWTIVTQARAYARAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVERNLTLGEPIIDF
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 27 | 27 | - | – | |
| PIRSF | 2 | 319 | 318 | 1.5E-95 | ||
| MobiDBLite | 7 | 25 | 19 | - | – | |
| PANTHER | 109 | 310 | 202 | 8.0E-74 | – | |
| PANTHER | 109 | 310 | 202 | 8.0E-74 | – | |
| Gene3D | 127 | 308 | 182 | 2.0E-31 | – | |
| ProSiteProfiles | 129 | 319 | 191 | 12.026 | – | |
| CDD | 135 | 316 | 182 | 7.50599E-111 | ||
| TIGRFAM | 135 | 295 | 161 | 5.7E-12 | ||
| PRINTS | 135 | 156 | 22 | 1.7E-13 | – | |
| SMART | 135 | 302 | 168 | 1.7E-6 | – | |
| SUPERFAMILY | 135 | 310 | 176 | 1.31E-31 | ||
| Pfam | 136 | 299 | 164 | 5.4E-24 | ||
| SMART | 137 | 301 | 165 | 1.4E-5 | – | |
| PRINTS | 176 | 198 | 23 | 1.7E-13 | – | |
| PRINTS | 237 | 250 | 14 | 1.7E-13 | – | |
| PRINTS | 277 | 299 | 23 | 1.7E-13 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | GTPase activity | Catalysis of the reaction: GTP + H2O = GDP + phosphate. | ||
| Molecular function | GTP binding | Interacting selectively and non-covalently with GTP, guanosine triphosphate. |
Expression pattern of LotjaGi3g1v0362600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…