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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0367800 |
| Transcript ID | LotjaGi3g1v0367800.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Protein nrt1 ptr family 1.2; TAIR: AT1G52190.1 Major facilitator superfamily protein; Swiss-Prot: sp|Q9M817|PTR6_ARATH Protein NRT1/ PTR FAMILY 1.2; TrEMBL-Plants: tr|I1KGM2|I1KGM2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0367800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:75382326..75385828) extracted from Lotus japonicus Gifu genome v1.2.
ATTGTATATGGTCTTATAATGTCGAAAGGGAGACATTGTTGACTTTGAAACATCACAGGTGGTCGCCGGCTCTGGCAGCA CTCCATGTCGGTGCCGATGAAAATTTCTACTTGAACTATCTCTGTCTTGTTGCACTACAAATCGGAGGAGGAGGAACCCT GAAACATCGAGTAATCAATGGAGAAAGAAGTGGAGCTTTCTTCATCAGCTGAACCTAAAATGGCTTCCCAACCCCAACAG CACAAGGGTGGCTTCGTTACCATGCCTTTCATCATAGGTTTGTTCCTCCATGATTGAATTCTTGTTGTTTCATGCTTTTG GATGCTGATTTTAGTGAATGAATGATTTGCAGCAAATGAAGCACTTGCGAGGGTGGCAACGTTGGGTCTGTTGCCAAACA TGGTATTGTATTTGATGGGGAACTACCATCTTCATTTATCCCAAGCTACCTACATACTACTTTTATCAGTTGCAACCACT AATTTCATGCCTCTTCCTGGCGCTTTCATTGCTGATTCTTATCTGGGTCGGTTCCTTGCTGTTGGTTTAGGTTCCATCAT CACTTTCCTGGTAGGTGTTTCTTTGCCATCACACCCCTTGTGATTTTCAAAGCTTTGGTGAATTGTAGAAAGATGAGTAA GCTATCTTGAAGTACTTATGCACTTCACACAAGATTAGATTAACACTATTAGGATGCATTTGGTGAGCATAAGATTCATA AGTTAATTTGAGGAACATATTGAAATAGCTCAAATTATTTGGAAGATATCATTTGAGCTTATCTTAGAGTATAAATGCCA ATGTAATCGTTAGTGAGAGTTTATGTAAATAGCCTATGACATAACCATAAGCTATTTTGAGCTTATTTTCAGAAACTGTT CAGATTAGCTTATGAATAAGAGTTTATGCTTTTCCATAACCTGTCTTCAGCTTATTCCAATAAGTTTCTCAAATTAGCTT ATGAATGAGCGCTTATGCGAGCTTATTGCCATAAGTAATTTACCCAAACACACCCTATATATAGGTATAAGTGCTTAGTC ATAAGATAATCTGAGAAGCTTATGAAAATAAACTCAAATGAACTATTTTAAGTTTAAACAGGGTCTTAGTTTCCTTTTAA CTGTCCTTACTTTTTTTTTTCTTTGGAAGAAATAAGTCTGCATATAGGGTTACTACTTACTACTACCGGACATTGAAATT AGTTAAGGAAAACCTAGTTGATTTGATGGTCTCAAAGTGATTCTGTAATAAAAGAAGACTTTTTCCCCCTTTTGATAACA GGGAATGACACTCTTGTGGCTAACAGCCATGATCCCACAGGCACGTCCTCCTCCTTGCAATCCTGCGACTGAAAGCTGTA AATCAGCAACGACTGAGCAAATGACAATGTTAATCTCTTCCCTTGCTCTCATGTCCATTGGAAATGGTGGCCTTCAATGT TCCATAGCATTTGGTGCAGACCAGGTGAATAGAAAAGATAATTCTGATAACCAGAGGGCACTGGAAATATACTTTAGCTG GTATTATGCTTCCTCAGCTATTTCTGTCATCATTGCCTTCACGGGAATAGTATATATCCAAGATCATCTTGGATGGAAAC TAGGTTTTGGAGTCCCAGCAGTGCTTATGTTCTTATCCACTTTCTTCTTCTTCCTTGCATCTCCTATCTATATAAAGAAT GAAACACACAGCAGCTTATTCACCGACTTCTTACGAGTGATTGTTGTGGCCTACAAGAACAGGAAACTTCGGTTACCGTC TAAGAAATCAGCAGGAATGTATCATCAGAAGAAGGACTCTGATCTTGTTTTTCCAACTGATAAACTAAGGTTGAATCACA TGTCCACATTACTGCCTTGTTATCTTTTACTTATTTGGCAGATAAATAATACTGTATACTAAACTTTGGGAAATTCTTTG TTTTATAGGTTTCTGAATAAAGCTTGCTTCATTAAAGATCCAGAAAAAGATATAGCCTCTGATGGATCAGCTTCAAATCC ATGGAGTCTCTGCACAATAGATCAAGTAGAAGAGCTAAAGTCCATTGTTAAAGTTATTCCCCTATGGTCTACAGGAATCT TGATGTCACTTAACATTGGAGGCTCGTTTGGATTGCTGCAAGCAAAATCCCTGAACAGACATATCACCCGGAACTTCGAA GTGCCAGCAGGTTCTCTTACTGTAATTATGATATTTACAATATTTATATGGATGGCACTTTATGATCGTGTCATCATTCC TCTAGCATCGAAGCTCAGAGGAAAACCAGTTAGGATAAGTGCCAAGAGAAGAATGGGAATTGGGTTGTTTTTTTCGTTTC TCCACCTGGTAACAGCAGCTATTGTTGAGACTACAAGGCGAAAAAGAGCAATCAGTGAGGGATACATTAATGATACTCAT GCAGTGTTGAACATGTCTGCAATGTGGCTTTTTCCTCAACTTTGCTTAGGTGGCATAGCTGAAGCATTCAATGTAATAGG CCAAAATGAGTTCTTCTATACCGAGTTTCCTAAGACTATGTCGAGCATCGCTTCATCCCTTTTTGGACTGGCAATGGCGG TAGGTTACGTGTTATCGTCTTTGGTATTTAGAATTGTGGAGAACGTTACTTCAAGAGGGGGTAAGGATGGATGGGTTTCA GATAACATTAACAAGGGTCGTTATGACAAGTATTATTGGGTTCTTGCTTCATTGAGTGCTGTCAATATACTCTATTATCT AGTATGCAGTTGGGCTTATGGTCCTACTGCTGATCAGGAATCAAAGGTAACTGAAGAAAATGATTCAAATGAGGAAGAAT TACCATTAATAGAATTTGGGACTCAGGCTCGACATGACAAGTCAGGTTAGTGAAGAAATTTTAAGTTCTTTATAATGTAA AGTTTGTACACTAGCTGTAACTTATAAAAATTCGGATCCACCTTACAATGAAATGAGTTTTGGTGTTTACAATAAATGAG AATGCTAGCTAGCTTCTATGTATCCTGTGTGAGCTGCCACTATTAAAGACAAAAGATTCATATTTAGGATCCTTCACATG CGTGTCAAGCTACAAATTATTAAGGAATGTTTTAGTTACTGAATGATATCGTTTTTGCTGTATTCTGAATCTCAGATTTA TATATTCTCAGGCATAATACCAGAGCATACTTATAAGATAAATAGATCGTGCATTATGATGATCTTCAGTACTTTTTCTT GTATCTTAGCTTGTTCTTCATCCAATTAATTTGTTTGTGAATATAAATAGATCGTGCATTATGATAATCACTTGTAGCAA TGCGTTTCTTTCTTTCCTTTTTCATAAACTTTTTAGGTCTTCTGCAGTAGTTTTTTTTGGTTTTCGAAGGCATCCCCACC GCATGTAGCCATGAAACTAATTCCTTCGAGCCTTGTAGATCACATTGAGCCAATAAGTCTGTTCCAGCAAATCATTTTCC ATACACATCACTCAGGAATCAAACCCTTGACTAAATGTTTATGTACCAACTGTGCTAGACCTT
CDS sequence (LotjaGi3g1v0367800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGAAAGAAGTGGAGCTTTCTTCATCAGCTGAACCTAAAATGGCTTCCCAACCCCAACAGCACAAGGGTGGCTTCGT TACCATGCCTTTCATCATAGCAAATGAAGCACTTGCGAGGGTGGCAACGTTGGGTCTGTTGCCAAACATGGTATTGTATT TGATGGGGAACTACCATCTTCATTTATCCCAAGCTACCTACATACTACTTTTATCAGTTGCAACCACTAATTTCATGCCT CTTCCTGGCGCTTTCATTGCTGATTCTTATCTGGGTCGGTTCCTTGCTGTTGGTTTAGGTTCCATCATCACTTTCCTGGG AATGACACTCTTGTGGCTAACAGCCATGATCCCACAGGCACGTCCTCCTCCTTGCAATCCTGCGACTGAAAGCTGTAAAT CAGCAACGACTGAGCAAATGACAATGTTAATCTCTTCCCTTGCTCTCATGTCCATTGGAAATGGTGGCCTTCAATGTTCC ATAGCATTTGGTGCAGACCAGGTGAATAGAAAAGATAATTCTGATAACCAGAGGGCACTGGAAATATACTTTAGCTGGTA TTATGCTTCCTCAGCTATTTCTGTCATCATTGCCTTCACGGGAATAGTATATATCCAAGATCATCTTGGATGGAAACTAG GTTTTGGAGTCCCAGCAGTGCTTATGTTCTTATCCACTTTCTTCTTCTTCCTTGCATCTCCTATCTATATAAAGAATGAA ACACACAGCAGCTTATTCACCGACTTCTTACGAGTGATTGTTGTGGCCTACAAGAACAGGAAACTTCGGTTACCGTCTAA GAAATCAGCAGGAATGTATCATCAGAAGAAGGACTCTGATCTTGTTTTTCCAACTGATAAACTAAGGTTTCTGAATAAAG CTTGCTTCATTAAAGATCCAGAAAAAGATATAGCCTCTGATGGATCAGCTTCAAATCCATGGAGTCTCTGCACAATAGAT CAAGTAGAAGAGCTAAAGTCCATTGTTAAAGTTATTCCCCTATGGTCTACAGGAATCTTGATGTCACTTAACATTGGAGG CTCGTTTGGATTGCTGCAAGCAAAATCCCTGAACAGACATATCACCCGGAACTTCGAAGTGCCAGCAGGTTCTCTTACTG TAATTATGATATTTACAATATTTATATGGATGGCACTTTATGATCGTGTCATCATTCCTCTAGCATCGAAGCTCAGAGGA AAACCAGTTAGGATAAGTGCCAAGAGAAGAATGGGAATTGGGTTGTTTTTTTCGTTTCTCCACCTGGTAACAGCAGCTAT TGTTGAGACTACAAGGCGAAAAAGAGCAATCAGTGAGGGATACATTAATGATACTCATGCAGTGTTGAACATGTCTGCAA TGTGGCTTTTTCCTCAACTTTGCTTAGGTGGCATAGCTGAAGCATTCAATGTAATAGGCCAAAATGAGTTCTTCTATACC GAGTTTCCTAAGACTATGTCGAGCATCGCTTCATCCCTTTTTGGACTGGCAATGGCGGTAGGTTACGTGTTATCGTCTTT GGTATTTAGAATTGTGGAGAACGTTACTTCAAGAGGGGGTAAGGATGGATGGGTTTCAGATAACATTAACAAGGGTCGTT ATGACAAGTATTATTGGGTTCTTGCTTCATTGAGTGCTGTCAATATACTCTATTATCTAGTATGCAGTTGGGCTTATGGT CCTACTGCTGATCAGGAATCAAAGGTAACTGAAGAAAATGATTCAAATGAGGAAGAATTACCATTAATAGAATTTGGGAC TCAGGCTCGACATGACAAGTCAGGTTAG
Protein sequence (LotjaGi3g1v0367800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEKEVELSSSAEPKMASQPQQHKGGFVTMPFIIANEALARVATLGLLPNMVLYLMGNYHLHLSQATYILLLSVATTNFMP LPGAFIADSYLGRFLAVGLGSIITFLGMTLLWLTAMIPQARPPPCNPATESCKSATTEQMTMLISSLALMSIGNGGLQCS IAFGADQVNRKDNSDNQRALEIYFSWYYASSAISVIIAFTGIVYIQDHLGWKLGFGVPAVLMFLSTFFFFLASPIYIKNE THSSLFTDFLRVIVVAYKNRKLRLPSKKSAGMYHQKKDSDLVFPTDKLRFLNKACFIKDPEKDIASDGSASNPWSLCTID QVEELKSIVKVIPLWSTGILMSLNIGGSFGLLQAKSLNRHITRNFEVPAGSLTVIMIFTIFIWMALYDRVIIPLASKLRG KPVRISAKRRMGIGLFFSFLHLVTAAIVETTRRKRAISEGYINDTHAVLNMSAMWLFPQLCLGGIAEAFNVIGQNEFFYT EFPKTMSSIASSLFGLAMAVGYVLSSLVFRIVENVTSRGGKDGWVSDNINKGRYDKYYWVLASLSAVNILYYLVCSWAYG PTADQESKVTEENDSNEEELPLIEFGTQARHDKSG
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 21 | 21 | - | – | |
| Phobius | 1 | 36 | 36 | - | – | |
| PANTHER | 4 | 580 | 577 | 0.0 | ||
| PANTHER | 4 | 580 | 577 | 0.0 | – | |
| SUPERFAMILY | 24 | 557 | 534 | 1.7E-19 | ||
| CDD | 29 | 559 | 531 | 0.0 | – | |
| Phobius | 37 | 55 | 19 | - | – | |
| Phobius | 56 | 66 | 11 | - | – | |
| TMHMM | 65 | 87 | 23 | - | – | |
| Phobius | 67 | 87 | 21 | - | – | |
| ProSitePatterns | 83 | 107 | 25 | - | ||
| Phobius | 88 | 92 | 5 | - | – | |
| Phobius | 93 | 113 | 21 | - | – | |
| TMHMM | 94 | 116 | 23 | - | – | |
| Pfam | 96 | 525 | 430 | 2.1E-73 | ||
| Phobius | 114 | 142 | 29 | - | – | |
| TMHMM | 141 | 163 | 23 | - | – | |
| Phobius | 143 | 165 | 23 | - | – | |
| Phobius | 166 | 184 | 19 | - | – | |
| TMHMM | 183 | 205 | 23 | - | – | |
| Phobius | 185 | 205 | 21 | - | – | |
| Phobius | 206 | 216 | 11 | - | – | |
| TMHMM | 215 | 237 | 23 | - | – | |
| Phobius | 217 | 237 | 21 | - | – | |
| Phobius | 238 | 242 | 5 | - | – | |
| Phobius | 243 | 259 | 17 | - | – | |
| Phobius | 260 | 330 | 71 | - | – | |
| Phobius | 331 | 352 | 22 | - | – | |
| Phobius | 353 | 371 | 19 | - | – | |
| TMHMM | 365 | 387 | 23 | - | – | |
| Phobius | 372 | 390 | 19 | - | – | |
| Phobius | 391 | 410 | 20 | - | – | |
| Phobius | 411 | 428 | 18 | - | – | |
| TMHMM | 411 | 428 | 18 | - | – | |
| Phobius | 429 | 447 | 19 | - | – | |
| TMHMM | 447 | 469 | 23 | - | – | |
| Phobius | 448 | 472 | 25 | - | – | |
| Phobius | 473 | 492 | 20 | - | – | |
| TMHMM | 489 | 511 | 23 | - | – | |
| Phobius | 493 | 512 | 20 | - | – | |
| Phobius | 513 | 536 | 24 | - | – | |
| Phobius | 537 | 559 | 23 | - | – | |
| TMHMM | 538 | 560 | 23 | - | – | |
| Phobius | 560 | 595 | 36 | - | – | |
| MobiDBLite | 566 | 595 | 30 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Oligopeptide transport | The directed movement of oligopeptides into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Oligopeptides are molecules that contain a small number (2 to 20) of amino-acid residues connected by peptide linkages. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi3g1v0367800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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