Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0382800 |
| Transcript ID | LotjaGi3g1v0382800.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Acyl-CoA thioesterase; TAIR: AT1G01710.1 acyl-CoA thioesterase II; Swiss-Prot: sp|O14734|ACOT8_HUMAN Acyl-coenzyme A thioesterase 8; TrEMBL-Plants: tr|I1JK89|I1JK89_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0382800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:77681039..77688738) extracted from Lotus japonicus Gifu genome v1.2.
AGAAGAAACAGAAATCAAAATGGACAAAGAGGAAGGTGAGTTTCCGTTACAAAATAAAATTCACCTGTTTGGATGCTGAG AAAATGAAATAACAGAAAAGAAAAAAACACAGGAAAAGTGTGACTAGTGTAAAATGCTCTGTTTGGCTTTCCCATTTTCT CAAATTTGTCTGTGAAATTTGCAGTGTGTGAGTTTCTCCGATGCGTTCCTCTTCTGCAGAGGCTTCCTACCTCGTCGATA AGGGAGATTTCGCAGCTTGTAATTGCCAAACACTATGGTAACTGTTCGAAATCATCGAATTGAAATCATGTTCTTTACAT TACATTCCATTTGCATTGTGATTGTAAAAATTTTGTGAATATCTACAAGATTGCAATACTGTGTTCAATTGTATTTGCAG TTGTGAGCAATTCTTGTAAATTGATGTATCAAAATGATGATGAAAATTGAAACAGCATTGAAATTATAGTTGAAGTTATT TTGATTGGTTGTGGTTAAATCATGCTTGAACAGCAATTAGAAACTGGACATTGGAATTCACGCGATGAATTATCTGAAAA TATACTTGGAGAATTGTTGTTTTCTTTTTAATTTTGTAACACTACAGTTTAGAATTGCAACAGTCAAATGGGAGATACAT GTTTTGATGTTTTGAATTCTGGATTGGTTGATTGTTTTGTAGAGGCAGGAGACTATGTTGCCCGTGAGGGTGAACCGGGG GATGCTGTTTTCTTCATATGGGATGGAGAGGTATGTTTGCTTATATTTTTCATGTATTCGACGTTAGACGATTTCGTGCT TATAGTCCAGTTTCATTGCTTGTAGGCTGAGGTTGTTGGAGCTGTTAGTGCAAATGATGAAGATCATACTGAGTTCCGGT TGAAAAGATATGACTACTTTGGTTATGGTAGTATTTCCCTTAATTCTTTTGTACTTTCATTCCATAGGTCATATGCTTGT CACATGGTTTGTGCCATCAAGATTTGGTTATTCTTAATTATTTTCTATTGCTACACTGTTAAGTATATCAATTAGGTCAC TATTTTTTTACACCCCATTTCTGCAACATGGTTGTTTTAAGTTAGTACGATAATGGTTGACTGGTTTTGGTTGCCATAAA TTCTCTAATGCGTCATTTTCTGTACAATCATTTCTTGTTACCAGAAATAAGTAGGACCTTGCCACTGTAATTCCATTTTT TTCTTTTCTGTTTTAGTCTTTTCGTGGGTTAAACCGGACATCCTCTTGCCAATTTCATCTATGTTCTTGTTCAAAATAAT GTGCATTAGCATTTACTTTTGTCTTGAGTTTTTTATCTCTATCACTAAAGAAATGAGAGAGATTTTCATGAAGGAAACTT CTTTTTAATATTAGTAGTACACAAAATCTTTTTTTATATGAAAGATGTAGGTGGAAATGTGATTGGATGAGTACAAGTGA ATGGATGTGTAGTGTTGTGCATTTTTCATTTCTTACTTACCTTCGCAACAATATTTTCGTACTAAATAGCATTGTTATTC CATATAATGAGAATGAAATGAACTGGCAAGTTGCAGGTTTGTCAAATACAGTTCACCAAGCAGATGTTGTTGCTTTGTCT AAGGTGCCCTTTAATTTTAGGTTCTTTTCCTACTGCTTTCCATTTCTGAAACCCAGTGTATAATCACATGAGCTATACTT GAATGAATTATTTACTCATACAGTGAATTTTTTGTTTGCTGTGGCAGTTGACATGCATAGTGCTACCCCATGAGCACTCA GCACTGCTACATCCAAAGTCTACAGAAAATGGTCTTGAGAGATGCCCACCTGTGGAGAGTATATTGCATCTGGAACCCTT TGAGGTGCTTTATAAGATCAGTAATCTGAATTCTTGGTTTCTTCTTGTCAAAGATTAAGTGTGTTAGAATATCTAGAGGA TGTCTCATGATACAATGATCCATGCTTATATATTAGAATGGTGTAGAGTGGATGATGTCTGGAGAATAGTTTCCATTTTT TTTTTCTTTTCATGATTTGTTTCTTTATTTAATTAGGACTAGAAGTCTTCTATTAATATAAATAGGCTTAGTTCTTTAAA TATCTTGAATATGGATAGCTATATGATTGATACTAAAAAGAGGTAACAAAAACTAGCCTGACATGGTTGCCCTGATATAT GGATACATAATGATGTATTAGAAAGTAGTAACATGATCTTTAACCTTGAATTCGTCTTATAGCTTTTTGTTATTCTCTTT GGAAGGTAGATGTCTTCCGAGGAATCACACTTCCAAATACTCCAAGATTTGGAAAGGTGTTTGGGGGACAGATGATTGGA CAGGTATGATAAAACTGCTTTATCTTCTTATATCAAAGCATGCTATTGCTACTCATGTCAGTAGCCGCTTTTGTACATTG ACTACTTACAAGAGAATATCTAACATGCAGGCATTGGTTGCAGCATCAAAATCTGTTGACTGCCTTCGGTTTGTTCATAG TTTGCATGCCTATTTTCTTCTTGCGGGGGATTTATATAGTAAGCACGTTTAATCACTTGACTTGTGCTCTAGCATAACTT CCCTTTCTATTTTTTTTATTAATTCCTTTACCTCAGATGAGACATGTATCTTATTATACCTTTATAAACTAAGAAAGTTG AAAGGTTCATTTTCAATTATTGATCCACCCAATAAATTGTTTTGAATAAGAAAGTTTGCTCCTGTTATTTTATATATGAA CTTATGAAGTGCATAGTCCCAGCTTATACTCTCTTGATAAATCCTACTACAGATTCTACATCACCAGCTTATTTGTACTA GTCTGCGTATTTGTTTTGATATGCTATCAAACTGTTTATTCTTTGCTTAAATGCTCGCCGCTAAGAAACCAGACAAATCA GTAGGTAATCCAAAAGAACCGAAATTTGAGCAATTGTATGAAGAAAACAAATAACTGTTTCACATGAGTATAATCTATCT AAACACCTTATATAGAAGTACTAGAAGTTCGTATTTTCAAGTACTTTCGTTAGCTAAGCTCCATGCTTTCATTGTAAACA TTAACTTGTTATCATGTAAAACAGGTTCTAACTTCCAAGGTTCTGTTAAATAATTTTTTTTTTTAAATTAGTTTTCTTGT TGAATTTGTGTATTATCGGCTAGAGAATAGATCCCAAAGTGTTTGTCTTTTAAAATCTCATGTATGAATTCCACTATCGT CATACTTATACCACATTATCTGCATTTCAATCTAATTCATTTGTTTGCTTTAGCTAATGACATAAACAGATTATAAATTA CATTTCTTTTCCAGTGCCTATTATGTATCAAGTTCACCGTCTCCGTGATGGAAAAAATTTTGCTGCAAGGAAAGTGGATG CAATTCAAAAGGGAAAAGTCATATTTACTTTGCTCGCTTCATTTCATGTAATATATACTTCTTGACTAGAACCTAAATTT TCAGTAATTATTCTAGTTTACTAGTTGCTAATTTATCCATTTCTCATGCTCTCTCTTATATATGTAAATTTTCTTGTTCT ACTTAATGGGATGTAGTCTATAAACCAAATTTCAGGACTGAGCAGTTATCTTCTAGCTTTACACTTTGGACTTGTACCAC TAGGAATTAAAAGATGCAAAGACCATCTGAGATTGTGCGATTATGTAACATCACTGTCATTATTACATTAAGGCGGGAAT GCCAGAGGGCCTCCCTTCAAGAATTGAGGAATCAAAAGTGTTTCTATTTACTTGGATTATGACATCATAGACCCTTAGTT TATTTGTCATGGTGAAAAAGGATATTAAATAAGATGAATATTTTGTTGATGAACTAATATTATATGTACTAATGCCACTT CCTCACGTTTGTCTGGTTGTGTTTCCTGTCTGGCATCGAGTTTTAAAACTAGGTACTAAATAAAATGATTTTTCGGCATC TCATAGCCTCAGAGACTATTGAATCATTTGAGGACTTATGTTCTCCAGCATTTTGATCAAGCACTCAATGTTCCACATTT TGGAGAAATCCTAGATATGGAATATTTTGAGCTCACAGTATTGGAGCGAATGGGTATTTTGCAAGATAGACTCTGTTGAA TGGTTGAGGGGTGAATTGAAACTGGTTTCTGGATATAATCGTGAATAAAAAGTTACATTCATAAGGTGAAAGAGTGGCTG GACTAGGAGAAATATGCTGATGGAATCATTTTTCGCATAATGAAGCTATAACATTCAGATCTATTTTGTGTGCTGGTCAA GAAACTCTGTTTGATTTCAAAGTTGTGTTGGATAGAGTAGAATGGTGTTCAGGTCAAAATATGGGTGAAATGAAACGTAG TTCAATTGAGTTATAAGTTGTAGATTTTCTTCTTGCTTGATAATTTTCCATTTGTCTATTTATAGTTATTTTATAACTGA AATTAGCTATGGCTTATGCAACTGTGTTTAGACTGTTCTCAGTTTGACTGAGAAATGTTTTCTAAACATATTGCCTCTTT CTCTAGTCAAGGAGTTCTGTTCTAAATTCCAGAGCACACTTATTATTGTTATTTCCTCAATCTACAGAAAGAAGAATCAG GGCTTGACCACCAGGAAGTAGATATGCCATCTGTTCCTGCTCCAGACATGGCAAGATGCAAGCTTATATTCATTAAGAAA ATTTGTTGTTTGGGATATCAGATTAATAATTCTTTTAATCTGTTACTTGCAGCTTCTACCAATGGAAGATCTACGGGAGA GACGTCTTCTTGACCCTCGCTTTCCGATGTAAGATTTGTTGTAAAAAATATTTTGGTTGATGCTATTTGCTGTATTACTA TATTTATTTGTTTTTGTTTATTTGTTTGTATGTAATTCTGTTTGCTTGTTATTAAACAGTCATGGGATCTCTCCTATTAT ATGAAAATGTATCTTTCTGGACTAAACAGAAACTGAACATGAAATTAAACTGTTTTTTTGTCCTTGAATATTTGGTAAAA CAACAGGGGAAGCCCATTAATTCATCCTTACTTGTTCCAATCAGATTCGAACCTGGGACCTCTGAGTTGAAATGCGTAGT ATTTAATTTTGTGGTATCTCCCTTGGGACAAAACCAAAATAAAAAAGAGGTAACCTATGAAAAGTTAATTTTCTAAGCAC TATGTGTCTAAGAATTTTGCTAACTCCCTTCTCTGTGCAAAAATAACCACCCACATTTTATATACAACTTCACTCATATG ATGACTGAAAAAACAATAAATGATGATGGGCGGCAAAGAACCCCCTCTCTTGTGCTTGCTGATTGAATCATAAGTACATA TGTAAGACTTGGCATATTTGTTCCTTAGAAAATAATATCATTGGATTTCTAGGGCACTTATACCATCCAAACTGAACAGG CCAATCTTCCAATGACTTCAGCTTGAGTTGTTGTGCTACTCCTGCTTCAGCTTTTTTTTGCAAATAAATTAAATGTACTT CTTTTCTACCTTTTTTACCATTCAAATGCCATGACTTACAACATATATGTTTCAGAGTATAGTTCCCATTCTATTGTTTT GCCTAGTCAACAACAACAATAAGAACAAACCAATTATTTTCCACTATGTGGGGTTTGCTACATGGATCAAATGATTCATC TGTCATGCATTAAGTTCAAAGATGATCATTTGCCTTTAAATCTCTATTAATAGTTTGATATGTCGTTTTCTTTGATCTCC CTTTAACTCAACTATTTATCTTTCCTTCATTAATTTGATCAACTCCTTACCCGTACTTTTATGGGTCGCCTCAACACATA TGCAAGCCATCTAAGACAAGACTCTACTTTTTTTCTACAATTACTCCAATATAATATCCAAAGTGAGATATTTTCAAATC CAATATACTTTCCTACTCCATAAACAATTCTACAGGCTAGGATAAGTCTGTATGATGATTTTCTGTATCATAATGACAAA TGTTGTTGTTTCAGAACATACCGGAACTTAAAGGCCACAACACGATTTGTCCCTTGGCCCATAGACATTCGGTTCTGTGA ATCTAGAATTGCAACAAATCAGACAAAATCTCCTCCCAGGTTAGCTTGATGCTCTCTATGCAATATTTTTGGTACTTTTT ATACTGAATATTCATGCAATGTTTTGGTGAGAAAATTGTCGAAAAGTTACTTCAATCCTTAGCCTTCTCACAGAACAATT TTACCAAACATGGCCTTTATGTTAGGCGTCAGCTGTTATGAATGCTACATATTATCTGAACTTGTTCAAATAATGTATGC AGTTTGAATTACTGGTTTAGAGCAAAGGGGAAACTTTCAGATGATCAGGCCTTGCATAGGTATATATCTTCTTTTAACTT CACATGTGTCGTAACTCTTACGCAATGCTAGGAGAATGAGTAATTTATAAACGAGATCTGTACTTGATGTACCAAAAATC AATGCATATTCCCCTGTAACTGAATTCAATTAACTCTAGAGCTTAGTACCTAAACAGTTTTAATCATGGTAAGATCCATG TCTAGTCACTGAAAAACTTTTTTCCTGAGAAAGGACTAGTTGGGAGAGTTTGTTGAAATATATATTGCTGAAAATCTCAT CTGGTTGTACCAAATGCATTTATTTCCAACCTGCATATCTTGATAATTTATATATTGTCTTCGAGTAGCAATATGATAGT TACTTTTACATGCTAAACTATGTGAACAAAATTTTCCAAAGAATCAAAAAAGTGCATCTGATTTCTCGCATTTATTAGTA TTTTGTTGTACCTTGTATTTCAGGAGTGTCGTGGCATATACTTCAGATCTAATATTTCTTCAAGTAAGTTTGAATCCCCA CCGTGGGAAAGGTTTCAGGGCACGTGGTGTTAGTCTGGATCACTCGTAAGTATTTGAGTCTTTTTTTGTTTTCTTGCACA GTATTTGAGTCTCTTACTGATTGCATGATGAGAAGTTTATATAATGTTATATTATAAGATGTGAGAAATGCAAAACAAGT TTTCAAGATGTCAATTTGCTATTTTGCTTTGTTTTTTAAATGTCCTTTTAATTTTATTTCAGGATGTGGTTTCATCGATC CGTAAAAGCTGATGACTGGGTGCTATTTACTGTGAGTTTCATTACAGCATTGTTTCTCATGTTTAATTGTGAAAAATTGC TGCAAGTAACTTTTTATAGAAATATCTTCACTTTATGATCAATTAACCAATTAAATCGGTAATCGGTACTCATTAATCAT TTCAGAGTTTACAGTTCTTAAATGAGAAATATTTTTTACCCGGAATTTTTTCATTTTTTCTTTAATTTTTCGGTTATGTT GATCATAAACTCAATTCATTCTGCAGATCTTTACTCCTAGTGCTTATAATGCACGTGCCTGTGTCACAGGCCAAATGTTC AATCAGAAGGGAGAGGTAAAGAATTACTAAATTATATCATTCATCTGCACTCCTTCTGGTTTATCTGTCTAACAGTGTGC CAATCATTTAAACTTGCAGCTTCTTGTATCATTGGTTCAAGAAGGTCTAACCAGGAAACTTAAACCTCAAGATTCAGTTA GTAAATCCAAGTTGTGAACTGCTGAAAAGTGCACAGAACTTGTGGCCTTTCCTTTTCTCTTTATTATCTTTATTTCTTTC TTTATGAAATGCATTATGTTTTATATACCTCAATGTATCGTAACTAGACGACAAAATGTTACATTTTGACTCAATGTTTA TAATGTTGGTGCGAGAGAGC
CDS sequence (LotjaGi3g1v0382800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGACAAAGAGGAAGTGTGTGAGTTTCTCCGATGCGTTCCTCTTCTGCAGAGGCTTCCTACCTCGTCGATAAGGGAGAT TTCGCAGCTTGTAATTGCCAAACACTATGAGGCAGGAGACTATGTTGCCCGTGAGGGTGAACCGGGGGATGCTGTTTTCT TCATATGGGATGGAGAGGCTGAGGTTGTTGGAGCTGTTAGTGCAAATGATGAAGATCATACTGAGTTCCGGTTGAAAAGA TATGACTACTTTGGTTATGGTTTGTCAAATACAGTTCACCAAGCAGATGTTGTTGCTTTGTCTAAGTTGACATGCATAGT GCTACCCCATGAGCACTCAGCACTGCTACATCCAAAGTCTACAGAAAATGGTCTTGAGAGATGCCCACCTGTGGAGAGTA TATTGCATCTGGAACCCTTTGAGGTAGATGTCTTCCGAGGAATCACACTTCCAAATACTCCAAGATTTGGAAAGGTGTTT GGGGGACAGATGATTGGACAGGCATTGGTTGCAGCATCAAAATCTGTTGACTGCCTTCGGTTTGTTCATAGTTTGCATGC CTATTTTCTTCTTGCGGGGGATTTATATATGCCTATTATGTATCAAGTTCACCGTCTCCGTGATGGAAAAAATTTTGCTG CAAGGAAAGTGGATGCAATTCAAAAGGGAAAAGTCATATTTACTTTGCTCGCTTCATTTCATAAAGAAGAATCAGGGCTT GACCACCAGGAAGTAGATATGCCATCTGTTCCTGCTCCAGACATGCTTCTACCAATGGAAGATCTACGGGAGAGACGTCT TCTTGACCCTCGCTTTCCGATAACATACCGGAACTTAAAGGCCACAACACGATTTGTCCCTTGGCCCATAGACATTCGGT TCTGTGAATCTAGAATTGCAACAAATCAGACAAAATCTCCTCCCAGTTTGAATTACTGGTTTAGAGCAAAGGGGAAACTT TCAGATGATCAGGCCTTGCATAGGAGTGTCGTGGCATATACTTCAGATCTAATATTTCTTCAAGTAAGTTTGAATCCCCA CCGTGGGAAAGGTTTCAGGGCACGTGGTGTTAGTCTGGATCACTCGATGTGGTTTCATCGATCCGTAAAAGCTGATGACT GGGTGCTATTTACTATCTTTACTCCTAGTGCTTATAATGCACGTGCCTGTGTCACAGGCCAAATGTTCAATCAGAAGGGA GAGCTTCTTGTATCATTGGTTCAAGAAGGTCTAACCAGGAAACTTAAACCTCAAGATTCAGTTAGTAAATCCAAGTTGTG A
Protein sequence (LotjaGi3g1v0382800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDKEEVCEFLRCVPLLQRLPTSSIREISQLVIAKHYEAGDYVAREGEPGDAVFFIWDGEAEVVGAVSANDEDHTEFRLKR YDYFGYGLSNTVHQADVVALSKLTCIVLPHEHSALLHPKSTENGLERCPPVESILHLEPFEVDVFRGITLPNTPRFGKVF GGQMIGQALVAASKSVDCLRFVHSLHAYFLLAGDLYMPIMYQVHRLRDGKNFAARKVDAIQKGKVIFTLLASFHKEESGL DHQEVDMPSVPAPDMLLPMEDLRERRLLDPRFPITYRNLKATTRFVPWPIDIRFCESRIATNQTKSPPSLNYWFRAKGKL SDDQALHRSVVAYTSDLIFLQVSLNPHRGKGFRARGVSLDHSMWFHRSVKADDWVLFTIFTPSAYNARACVTGQMFNQKG ELLVSLVQEGLTRKLKPQDSVSKSKL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 1 | 120 | 120 | 6.2E-21 | ||
| SUPERFAMILY | 4 | 112 | 109 | 1.7E-20 | ||
| SMART | 15 | 132 | 118 | 4.0E-6 | ||
| CDD | 15 | 112 | 98 | 1.30351E-15 | ||
| ProSiteProfiles | 15 | 85 | 71 | 14.657 | ||
| Pfam | 34 | 111 | 78 | 2.6E-10 | ||
| PANTHER | 36 | 426 | 391 | 1.4E-201 | ||
| PANTHER | 36 | 426 | 391 | 1.4E-201 | – | |
| Gene3D | 129 | 420 | 292 | 3.3E-92 | ||
| SUPERFAMILY | 130 | 239 | 110 | 9.32E-33 | ||
| CDD | 143 | 235 | 93 | 1.45594E-39 | – | |
| Pfam | 158 | 411 | 254 | 5.0E-53 | – | |
| SUPERFAMILY | 245 | 414 | 170 | 2.16E-41 | ||
| CDD | 312 | 411 | 100 | 5.66854E-37 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Acyl-CoA metabolic process | The chemical reactions and pathways involving acyl-CoA, any derivative of coenzyme A in which the sulfhydryl group is in thiolester linkage with an acyl group. | ||
| Molecular function | Acyl-CoA hydrolase activity | Catalysis of the reaction: acyl-CoA + H2O = CoA + a carboxylate. |
Expression pattern of LotjaGi3g1v0382800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…