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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0384000 |
| Transcript ID | LotjaGi3g1v0384000.4 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Signal peptide peptidase-like protein; TAIR: AT1G63690.1 SIGNAL PEPTIDE PEPTIDASE-LIKE 2; Swiss-Prot: sp|Q8W469|SIPL2_ARATH Signal peptide peptidase-like 2; TrEMBL-Plants: tr|I1JK76|I1JK76_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0384000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:77837505..77844802) extracted from Lotus japonicus Gifu genome v1.2.
ATGGTTTGTGAAGAAAATGAAACTGATGTCGATATTGGAATACCTGCTGTCATGCTTCCACAAGAGGCTGGCTTAACATT GGAAAGACATATTAAAAACAACTCCATAGGTATGATTGACTTTCCCTGAGCCATCTCTAATTTTGTAACTAGTTGTCTTT TCTTCGGCACAGGGCACTTTAATTTTTAAAATGACAACTTTAGTTTTTGATGCCAGATCTTGTCTTGTGTCTTACTTGGC TTTCTTGCACTTTTGCATGTACATTCTTGCTATTAAGTGTCCATACAGTTATACTCTCCACTGCGTCCATTGGTTGATGT CGCGGAAGTATTTTTGTGGCTCATGGCTGTTGGTACCATTTTATGTGCTTCTTATTGGTCTGCCTGGACTGCCAGAGAAG CAGCTATTGAGCAAGAGAAGCTTTTAAAGGTCACCTAGTTCCTTTTCCTGTCAAATTTATTCTCTCTCTCTTGGATGAAA GAAGAAATATTAATAGGTGACGAAAGAAAGAATACAAATATGAGGTATCATTATCATCCTTAGGCCGAGACAGACAAACA AAAAATCCTGAAAGGAAAAACTCATTAAAACAATAGGATATTGTATAGGGAGGCTCTTGAAAGGAATATGTCTACTCATA TTTAAGAACTCATTAATTTAGTTTCTATTTACCAATATATAAATTTTGTACTTTCAGGATGCTTCAGATGAATATGTTAA TGCAGAAAAAGAAAATGTTGGTTCCAAGGGTTACGTGGAAATCAGTACGGGAGCAGCAATTTTATTCGTTGTGCTTGCTT CTTGTTTCTTGGTTATGCTGTACAAATTAATGTCACACCGGTTTGTTGAAGTTCTGGTGGTTCTATTTTGTATTGGTGGG GTAGAGGTGAGTTATTCTTCTTCCAGGCTTTGTTCTTGTTGATTAAAGTTCATCCCTTCCTCCAACCTAGGTTGTAATCA ATTTGTTGATCTACCAGTTTACGACACTTCACTAATAATCATTTTGCATCTTCTTTAATATAGCTGAATTGTAAGTGGTG TTCCCTTGTGGTTTCTTTTGAATGAAAAATTTCTCCTCTATGTTTTGTTATCATGAAGAAATGCTTGGGGCGTGATCTGC GATAGAAAAGTATCATTAACCTTAAAGGGAAAATTTTACAGCACAACTACAAGACGGATAAGTTAAATCCTAAATCTTAA GGCTCAGGGCCAATAAGATGCCTCTGGTTATTCAACCCAAATAAGCCATGCCATTTACAATTGCACAATATGATAAATTT TGAATCCCCACCCCAGTAGACCTAATTATCCCTTAGATTGATTGACATTATTATTTTCGTTAGGTGATCTTCGCATAATT AATTACTTCGAGCTAAATTCATAGGCATGCATGGTATCATACAGTAGCTGAAACTTTATATTCTTCATGTGTTTTCAGGG ACTGCAAACTTGTTTAGTAGCTCTGTTATCTTGGTAAGTCTTTTATCCAGGAAGGTGGTTTGGTGAGAGGAGGATTTGAC AACTAATCTGTTTACTTTTTCTTCTGTTATGAATTTGTGCAGACCAGTTGAGTTATATATGCCATGCTTTTTATAATCAA AATTTTAAATCAAACTGAGAGAGAGTATAACTACATTTATTAGGCCCAACTCAAATGCCACATTAATTTATGTTCACTTT TTCTTCTGTTTACTTTATTTATGTTCTAGAACTTTGATTAACTGTTTTTATTATTGGGGATATAAATGGTGGCAAGTTAG GGTGAAAGTAAATTGAAATTTAGTTGGCTCTCAATCGTTTTCCACATACCTTTTTCCTGAAAAATATAGCAGTGAAGAGG TAATGAACCTAATTTTAAAAGAATCATTAGCCAAATGTAACAAGACACACATATAGCTCTCTTGAACTTTGCTCAAATAA TTTACATAATTTTGGGGTGACAGTATTTTACTGCTTTCTTTTAATATCAACATTGCAATAAATAAATTTTATTTGAAAAG AGAAATGACTTGAGCTTGAAGTTTGTTGCTGCACATGGTATATTCTATTAGATTCCATCGTTATGATACGGAAATGACAG CAAAATGCTCATAGTTTCAGATGGTTTCAACATCCTGCACAAACATTTGTGAAGATACCCTTCTTTGGAGCTGTCTCATA TCTGACACTTGCCATTACTCCCTTCTGCATTGTGTTCGCTGTTGTTTGGGCAGTATATCGTCATGCATCAGTTGCTTGGA TTGGTCAAGATATTCTTGTAAGAAAGTTTTATTACTTCCTCTGTATTCAATACTTTTTTTCTGTTATTTTTGCTTTGGCA TGGGCTTCCTGGCATATTTAATTGAAACATAAAAAATTATGATACAATCATAACAATACTACTTGTTTCATATCATAGAT ATTGCTTTCCAATTGCTAGAACGTCGCTGCTAAGAAACTAAAAATCTTCTTAAACTAGCATGGAATCTGAACTCTTCCTC TGGTGTGTAACTAAAAAGAACACTATAGGATACCATATGTGGGTCTCGTAATGTACTACTTTGATTTACATATGATATAG ATCCAATGAGTAATTATCTCCTTGGCGTGGACTGTGGAGTCATGAACTACAAATTTAGAGTGCATTCTTTTGCTATTGGT CAACTGGAAACTTGTTAAGAACAGGATCAAATTCCTAATCTCTGCTTTGTATATGAGAAGTTAGGCTGTTTCTCAAGACC AAAATGTTGCATTTCACATGAGTTGTTAGCACATGGTTGAAAATTGTTATTGGCTATGGATAATTTGATATACCCATATT AGTATTTATTTCCATGTTTGTTATTATTTTTCTGCTTCACATCCATGTTTTTTTCTTTCTTTCTTATCACTTACGTATAT AATTTTGTTGATAATACTTATCTTTCTTTCTTTTGATTTAGCTTCAAATAGAAACTTAAGTCCCGCCATTTAGGTTTTCA TATTAGTTATGACTAACACTCCTTTAAGCCTGTAGGCTTGTATATTATAATACTTGATTTACTAAATGGAAGCCTTTTAC ACTTCCAAGAAATTAATATGGATTAGCATTTATTTACTTTTTTTTCTACCTCCTGTCCTTCAGGGCATCGCGCTGATAAT TACAGTTCTTCAGATTGTTCGCATACCAAATCTCAAGGTAATGATGATTCATCAATCAAAAACTATTTTTGGTTCTTAAG AAAGATTGTCCACGTCACCGTCTCGGTTATTCTCATGTACTTGTTATGAAACTTCTAAATTTAAGGGTACGGTCATACAT GGTGGAGCATTATGTACAGTTAAACTGAATAACTGTTGAAAAAATAGCTTTCCTGGATACTAGTGAACTTTTTATTGTTA AAAAAAGACACTTAACATTTCTCTGTATCAGGTTGGGACTGTTCTTCTCAGTTGTGCCTTTCTGTATGACATCATATGGG TGTTTCTCTCTAAACGGTGGTTCCATGAGAGTGTGATGATAGTGGTGAGTGTGTTAAAGAAAGCTCTACCTCTACTGTTC TTTACAAAACTTATTTTTACTTCATAAACACTGTTCTTTTCCCCCCTTAAATACTGTTGAAATTATGTCTCAGTAGCTGT TTGAATTTTAAATTTAAGTTGTTAGTTTGAAGTTGTTATTTAAATTTGAATAAGTCCTAATTCTGTTAGGATGATTAGTT AGACTATCTTTGAATTTGTTTAGAGTATCTTCTGTTAGTATTTCAAATTTTGCAGATTTCTAGTCAGTTTGTTAGTTACT CTTTGCCTTTAAAAGAGCAAGTTCTGATTAATAAAAAATTGGCCTTCCATCATAAATATTTCTCTTCTCTTTCACGTTAA AAAAAAACCAACAGAGTGGTATCTAGAGCCATCTTCTTACGGACCTGTGAACATGGATGCTGAATCAAATTTCTCCAAAG TTGCACCTCCAGTCTTTGATGGAGAAAACTACGATCTATGGGCTGTCAAGATGGAGGCTTACCTAGAGGCTTTGGATCTT TGGGAAGCTATAGAAGAGGATTATGAAGTCGTTCCGCTGCCTGCCAATCCTACCATGGCCCAGATCAAGAGTCAAAAGGA GAAAAAAACCCGGAAAGCAAAGGCAAAATCATGCCTTTTTGCTGGTGTTTCATCAACCATCTTCACAAGGATCATGAGTC TCAAATCAGCGAAAGCAATTTGGGATTATTTGAAGGAGGAGTATGTTGGAGATGAAAGAATAAGAAGCATGCAAGTGCTC AATTTAATGAGAGAATTTGAGATGCAGAAGATGAAAGAGTCTGAGACAATCAAGGAATACTCAGAAAAATTGTTAGATAT TGCTAACAAAGTAAGGCTGCTTGGAAGTGCGTTTGCTGATTCAAGAATTGTTGAAAAAATTCTGGTAACAGTTCCTGAGA GGTATGAAGCGTCTATTGCCTCACTTGAGAATACGAAGGATCTTTCTAAAATCACTTTGGCAGAAGTGATGCATGCATTG CAAGCCCAAGAACAACGAAGGCTGATGAGAGAAGATCGTGTTGTCGAAGGTGCTTTTGCAGCAAAGCATCATGATAATGG ATCCAAAAGAAATAATTCTATTAAGAAGAACCAACCAACCAGTTGTGAGAATTTTCCAAACAACCAAAACAATGACAGAG GTAGAAAAAATTATCCACCTTGTCATCATTGCGGAAAGATGGGTCACCCACCGTTCAGATGTTGGAGAAGGCCAGATGCA AAATGCAGCAAGTGCAACGAGATGGGGCATGAAGCTGTAATTTGTAGAGACAAAATCCAGGAAAGTGCAAATGAAGCAAA AAATGCGCAAGAGGAGGAAGAAGACGTGCTATTTGTTGCTACTTGCTTCTCTAGTAATAATTCTTGTGAATCTTGGTTGA TTGACAGTGGTTGTACTAATCACATGGCCAATGACAAAGAGTTGTTCAAGAGTTTGGACAACACCAAAGTCAAATGGGTC AGAATTGGGAAAAAATTCCAGTAAAAGGCAAGGGGACAGTAGCTATAGAAAGCTACACAGGTACAAAAATTCTCTCTGAT GTTTTGTATGTACCTGAAATTACTAAAAACTTGCTTAGTATTGGACAGTTGCTTGAGAAAGACTTCAAATGTTCAAGGTA AAAATGAGGAGCAAGACTTTTTCATTTGATTCAATAAAGGAGGAGAAAATTGCATTTCATGGTGATTTGGCCAACGAGCC TGTCACACTTCTTAGTGAAGGTGACGACGAAGAGAAAAAGAAAGGGAAAGCCAATTGCAACAACGACAACAGGGGTGTTA CTGTTGAAGATGATGGTGGTGTTTTTGCAGCCACTGAGGTTTTGGGTCGCCAGCCAAAAGATAAAGAGCCTGAAGGTCAT GTTCATGTGCCAGGACCTCAAGGAACAGATCAAAATCCAAAACTACCTAATGAGAGTCCTCCATGTCATCACATGTACCC TACACATTACTATGTTCATCCACTTCCTGCTTTTATTTACAACAACTATAGTGTGGCGTATTTTGCACCTCCGCTACCAT ATTCTTATGCATACGTGATGTGTCCATGGAATGGAAGCGAACCTGCCGGAGCACATATTCCAGTATGGTTGACTTTTTGA ACTTTGAGAAGTTAGAAGTTTCCAGCTACTGATCCAAGGAGGAGTGTTGAAATTATGTCTCAGTAGCTGTTTGAATTTTA AATTTAAGTTGTTAGTTTGAAGTTATTTAAATTTGAATAAGTCCTAATTCTGTTAGGATGATTAGTTAGACTATCTTTGA ATTTGTTTAGAGTATCTTCTGTTAGTATTTCAAATTTTGCAGATTTCTAGTCAGTTTGTTAGTTACTCTTTGCCTTTAAA AGAGCAAGTTCTGATTAATAAAAATTTGGCCTTCCATCATAAATATTTCTCTTCTCTTTCACGTTAAAAAAAAACCAACA CTTGCATTTTTCTATACAGGTAGCTCGAGGAGGTAAGAGTGGAGAAGACGGTATCCCCATGCTTCTCAAGATACCACGTT TGTTTGATCCTTGGGGTGGTTACAGCATCATTGGTTTTGGGGACATAATCTTACCAGGACTTCTGGTAGCATTTTCACTA AGGTTGAATTGGAAGTCATGTATTGATCATACAATATCTGCCCCTCATATTCATCTTCTCTGTATCATCACTGATGCTCT TTTTTTCTGAATAAATACCAGTCCATGTTATCTCCTTGTAAAATGTTGTTGGTTGATGGAGAGCATGGTCTATATCAAGT TAATAGTTCATGAATTTAATTATTCTGCTAATGACTAACTTTACAGGTATGATTGGTTAGCAAAGAAGAAGCTTCGTGCT GGATACTTCTTGTGGGCAATGACTGCTTATGGTTTAGGTATGATATGTAATATCTAAAGATAGTTTCCATGATAAAATGT GAAAATCTTCAAACCTGTTAACTGTTACTATAAGATTTCTAACAATTTAAAAAAAGAATATCCTGGGAAACTTCCTTGCC ATTGCTGGGCATTGTAATCGGATTTAACAGGAGTCCATAAAAACTTCAATGCTGACAGTCAGCAAATTTCTCAAGTTTGG TTTTTGGATGGCACCAGAATGGGGGAAATGGTTTAAAGTAGAGGCTTATCTTATAATCAGTGTTATTAAATTTCCGCCAT TGCGGAATCTCATTGCGGGTTTTTGGCTCTCCGCCATGGCCGATATCATGCCATAATCCGTCAAAATCCACCATCATTAT TTGTCAAATATGGTGGGATTTTGGCTCTCGGCCATAGTCCGCCATTAATGACCTTGATTATAATTTATTATAATGCATTA GGCCAATGCTGGCTGTGATGAAATATATTAAATATCCATACAATTTACAGTTTAGCATTGCATAACACTTTGATTTATAC ATCATTAAGAACTACACTAAAAATCTGTTGTCATCCTTATGTTCCTCAGTTCATATATGGAGATTACTATTAGCTTGCTC TTTTACTCCTCATTCTTTGAATTTTGATCTGCAGGTCTCCTCATCACATATGTGGCTTTGAACTTGATGGATGGGCATGG CCAGCCGGCTTTGCTTTATATAGTCCCATTTACACTTGGTAAGTTTAAGTATCAGGCTCATTTAAATTTGAAGCACAAAC ATATGTAATGGCATGCTAGTATATAATAACTGGTCCTGTTTCTGAAACCTTAAATGCAGGCACCTTTTTGTCATTGGGAA AGAAGAGAGGTGAGTTAAAGATTTTATGGGCAAAAGGAGAACCAAAAAGGTCTTGCCCGCATATCCAAGAGGATAACCAA TCATTTAACCACCATTGA
CDS sequence (LotjaGi3g1v0384000.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTTTGTGAAGAAAATGAAACTGATGTCGATATTGGAATACCTGCTGTCATGCTTCCACAAGAGGCTGGCTTAACATT GGAAAGACATATTAAAAACAACTCCATAGTGTCCATACAGTTATACTCTCCACTGCGTCCATTGGTTGATGTCGCGGAAG TATTTTTGTGGCTCATGGCTGTTGGTACCATTTTATGTGCTTCTTATTGGTCTGCCTGGACTGCCAGAGAAGCAGCTATT GAGCAAGAGAAGCTTTTAAAGGATGCTTCAGATGAATATGTTAATGCAGAAAAAGAAAATGTTGGTTCCAAGGGTTACGT GGAAATCAGTACGGGAGCAGCAATTTTATTCGTTGTGCTTGCTTCTTGTTTCTTGGTTATGCTGTACAAATTAATGTCAC ACCGGTTTGTTGAAGTTCTGGTGGTTCTATTTTGTATTGGTGGGGTAGAGGGACTGCAAACTTGTTTAGTAGCTCTGTTA TCTTGTTTCAGATGGTTTCAACATCCTGCACAAACATTTGTGAAGATACCCTTCTTTGGAGCTGTCTCATATCTGACACT TGCCATTACTCCCTTCTGCATTGTGTTCGCTGTTGTTTGGGCAGTATATCGTCATGCATCAGTTGCTTGGATTGGTCAAG ATATTCTTGGCATCGCGCTGATAATTACAGTTCTTCAGATTGTTCGCATACCAAATCTCAAGGTTGGGACTGTTCTTCTC AGTTGTGCCTTTCTGTATGACATCATATGGGTGTTTCTCTCTAAACGGTGGTTCCATGAGAGTGTGATGATAGTGGTAGC TCGAGGAGGTAAGAGTGGAGAAGACGGTATCCCCATGCTTCTCAAGATACCACGTTTGTTTGATCCTTGGGGTGGTTACA GCATCATTGGTTTTGGGGACATAATCTTACCAGGACTTCTGGTAGCATTTTCACTAAGGTATGATTGGTTAGCAAAGAAG AAGCTTCGTGCTGGATACTTCTTGTGGGCAATGACTGCTTATGGTTTAGGTCTCCTCATCACATATGTGGCTTTGAACTT GATGGATGGGCATGGCCAGCCGGCTTTGCTTTATATAGTCCCATTTACACTTGGCACCTTTTTGTCATTGGGAAAGAAGA GAGGTGAGTTAAAGATTTTATGGGCAAAAGGAGAACCAAAAAGGTCTTGCCCGCATATCCAAGAGGATAACCAATCATTT AACCACCATTGA
Protein sequence (LotjaGi3g1v0384000.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVCEENETDVDIGIPAVMLPQEAGLTLERHIKNNSIVSIQLYSPLRPLVDVAEVFLWLMAVGTILCASYWSAWTAREAAI EQEKLLKDASDEYVNAEKENVGSKGYVEISTGAAILFVVLASCFLVMLYKLMSHRFVEVLVVLFCIGGVEGLQTCLVALL SCFRWFQHPAQTFVKIPFFGAVSYLTLAITPFCIVFAVVWAVYRHASVAWIGQDILGIALIITVLQIVRIPNLKVGTVLL SCAFLYDIIWVFLSKRWFHESVMIVVARGGKSGEDGIPMLLKIPRLFDPWGGYSIIGFGDIILPGLLVAFSLRYDWLAKK KLRAGYFLWAMTAYGLGLLITYVALNLMDGHGQPALLYIVPFTLGTFLSLGKKRGELKILWAKGEPKRSCPHIQEDNQSF NHH
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 399 | 399 | 6.1E-255 | ||
| PANTHER | 1 | 399 | 399 | 6.1E-255 | – | |
| Phobius | 1 | 53 | 53 | - | – | |
| TMHMM | 51 | 73 | 23 | - | – | |
| Phobius | 54 | 75 | 22 | - | – | |
| Phobius | 76 | 105 | 30 | - | – | |
| Coils | 79 | 99 | 21 | - | – | |
| SMART | 105 | 374 | 270 | 1.8E-89 | ||
| Pfam | 106 | 385 | 280 | 1.5E-82 | ||
| TMHMM | 106 | 128 | 23 | - | – | |
| Phobius | 106 | 129 | 24 | - | – | |
| Phobius | 130 | 140 | 11 | - | – | |
| TMHMM | 138 | 160 | 23 | - | – | |
| Phobius | 141 | 166 | 26 | - | – | |
| Phobius | 167 | 177 | 11 | - | – | |
| Phobius | 178 | 203 | 26 | - | – | |
| TMHMM | 180 | 202 | 23 | - | – | |
| Phobius | 204 | 208 | 5 | - | – | |
| TMHMM | 206 | 228 | 23 | - | – | |
| Phobius | 209 | 228 | 20 | - | – | |
| Phobius | 229 | 234 | 6 | - | – | |
| Phobius | 235 | 253 | 19 | - | – | |
| TMHMM | 235 | 254 | 20 | - | – | |
| Phobius | 254 | 289 | 36 | - | – | |
| Phobius | 290 | 312 | 23 | - | – | |
| TMHMM | 290 | 312 | 23 | - | – | |
| Phobius | 313 | 323 | 11 | - | – | |
| Phobius | 324 | 345 | 22 | - | – | |
| TMHMM | 325 | 344 | 20 | - | – | |
| Phobius | 346 | 350 | 5 | - | – | |
| Phobius | 351 | 370 | 20 | - | – | |
| TMHMM | 354 | 371 | 18 | - | – | |
| Phobius | 371 | 403 | 33 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Aspartic-type endopeptidase activity | Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which a water molecule bound by the side chains of aspartic residues at the active center acts as a nucleophile. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
Expression pattern of LotjaGi3g1v0384000.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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