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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0387700 |
| Transcript ID | LotjaGi3g1v0387700.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | 1-aminocyclopropane-1-carboxylate synthase 1; TAIR: AT1G01480.1 1-amino-cyclopropane-1-carboxylate synthase 2; Swiss-Prot: sp|Q9MB95|1A11_PRUMU 1-aminocyclopropane-1-carboxylate synthase 1; TrEMBL-Plants: tr|A0A1J7HI44|A0A1J7HI44_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0387700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:78428111..78432153) extracted from Lotus japonicus Gifu genome v1.2.
CACATATCCACTATTTACTTATTTTTCTTCGGTTTTCTCAGGTTTTGAAATTCGAATTAGACTTTTCCTCCTTTGTCATC ACCTACAATATCAATCGATGGTCCACCACTGCATATAAATTGCTCTACATTCTCTCCTGTTTTCCCACCACTATAGCACA AAATCCAAAACCTTTGCTAATCAAATTAACTAGAGAGTGACCTTACCTTATATTAATTTAACATGGGTTTGGGAAGTGAT CAGAATCATCAACTTTTGTCCAAGATTGCAACCAATGACAAACATGGAGAGAATTCTCCATACTTTGATGGGTTGATGGC TTATGAAAGAGACCAATTTCACCCTACAAAAAATCCTAATGGTGTTATCCAGCTTGGTCTAGCAGAAAATCAGGTATATA TATGTTGAATTAACTCATATGATTTAATTCGTGTGCCATGCAAGGTGTTTGATAAATTGCCTCATCCAGTGGGTGTTGAT TAATATTTATTGATTTTTTCAGCTCTGCTTTGATCTGATTGAAGAGTGGATAAGAAATAACCCCAAGGCATCAATTTGCA CTCCTGAAGGAGTGCATAAGTTCAGAGAGATTGCAAACTTTCAGGACTATCATGGATTGCCAGAGTTCACAAGAGTAGGA ATCTGAAAAATTTAATTATTTGACTATTATTGTAATGCTTGAGCATAGTGTTTAACTCATATTGGTTTATAATAAGAAAT GTTTTCATTTTTTTTCAGGCTATGGCAAATTTTATGTCAAAAGTGAGAGGTGGGAGGGTGAAATTTGATCCTGAGCGTAT ACTGATGAGTGGAGGGGCGACAGGGGCAAACGAGTTGATCATGTTCTGCTTGGCTGATCCTGGGGATGCTTTTCTTGTTC CCACACCTTATTATCCTGCGTATGTACCTTAATTAATTTCACAATATAGTATTAAGGACACCAAACCAAGTATTAAGGAC ACCAAATAGGATGAAGCTTGCATTCATGTAAATTAAAACAATTTATGTCCAAATAAAATATAAATTAAGGGGACTCATAT ATACCACCGAGTTTCAGCACAATTAATAGATAACTAAACTCTTTTTCCCTGAAGGTTAGCTTAATTATTTATTATGAACT AAATGTCACATAAGTAAACCATAAAATAGCGATGTATTGTGTAAGTTAGTATGCAACACCCTCATTTGTAGCGATCATTA ATAGTTAAAAAAATGTGAATGCACAAGTAAACTAAATGTTTAAATGAGCATAAAAAAAACTAAATGTTTAAATGTTTACC AATCATTTTCAATTCAAAATGAAAATGTTTGACATACATCCGATTTTAGCCGTGACCCCAAAATTGATGTCTACTTATAA ACATTCTATTCAAAATGAGAACAAAAATATAAGCATGACTCAGTAAGTTAGGTGAAGCTCAGTCTGAAATGGAAAATAAT AAATCTTGTAAAGAGAAATTGGTCAACAAGCGTGCGGTTGCTGACATGTGCAAATCTAAGTGGTAGTGGATAGGAACATT GACCTTTTAAAAAATGAAGCCATGACCCATGAACAACTCAGCGTACGGTCACCTTATTATATTCTTCTTTTACTTTTGGA AGCAAAAATATTCCTGCTTTCAGAGTCCGAGTCTTGTGCATAAAATAGTAAAATAGGTAATAAAAAATGACAACTTTAAA ATTCAAAATAATTAAAAATGGATAGAAACCAAATGCAGAAATTCTCTTGTCTATTTCTTTCTTTAACACTTTTTTTCTAG CCACCAAATTAATACATGGGCCACCATCTATGAAAAATTATTTCTGTATAATTAAGATATTTAATAGACACTCAAAGTAT GAAAGAAAGAAATAATTAATGTGATACATGATATAAAAAAGAGAAGAATAGGAAAAAATAATGTATGTATATATTTGCAC TATTTACATGTTCAAATATCATCGCTGATATTATATAGTTGTAATCGAGAATGACAAATGATTCAAACGAGAGACGTCAT TGAGTCATTAGGCTCATGTTATGATGACATGATTATGAAGTAGTAACAAACTTAATAAATCCAGGTAATTTCATTAAGTT CGCATGCCTTAATTTAGTGATACATACCCGAACTATGTATTTAATCGTCTCATAATAGTGATAGACACATTTCATATTTG AATTTTGATTTATTCATATTTAATTTTAATTTCTTTATGCAGATTCTTGCGTGATTTATGTTGGCGAACTAAGGCGCAAT TAATCCCTGTTCTCTGTGATAGCTCCAACAACTTCAAGATAACAAGAGAAGCTCTTGAAGCAGCTTACAACAAAGCCCAA GAGGACAACATCAATGTGAAAGGAGTGATTATAACCAACCCCTCCAACCCTTTGGGAACCATCCTAGACAGAGACACAAT GAAGAGCATCGTGAGCTTCATCAATGAGAACAACATCCATTTAATTTCTGAAGAAGTGTATGCAGCCACGGTTTTCAGAT CCCCAAGCTCTTATGTGAGCGTTGCTGAAGTCATCCAAGACATGGAAGAGTGCAACAATAATATTAATCTTGATCTCATT CACATCACTTACAGTTTGTCTAAGGACATGGGGTTCCCTGGTTTTAGAGTTGGGATAGTTTATTCATTCAATGATGGAGT TGTGAGTTGTGGAAGGAAAATGTCAAGCTTTGGGTTAGTCTCCTCTCAGACTCAACACATGCTGGCTTCAATGCTTTCAA ATGACAAATTTGTGGACAATTTTCTCAAGGAGAATTCAAGGAGGTTGGCTAAAAGGTAAGGGAGGGGCAACATGTTTGAT TATTGTTCTGTAAAACAGTTTTTCAAAACAGGAAAAAAGAAATTAATTTAATATGAATAGTTATAAAAAAGTTGCTCTTA AAAACATCTTATAGATATTTAAAAATAATATTTAAAAAAATTGTTTGAATGAGTTGTTTTACAATGTTAAAATAATATAA TTTGGAAACTACAAAAAGAAGCTGAAAATTTTTCTTAGCTGTTTTGAGATTTTAATTTTAAAAAATAATTTTTTTTAAAT ACTGACTATAAAAAACAAGTTTTTAAATTTTTTAAATCAGAACAATTTTTTTCAAATCACAAACAAACAAGACCTGAATG TTTATTATTTTTTTTCTAATTTTAGTTTTCAAATCACAAGTTTTTTAATGCTTTGTATTTTGGAAAACAAGTTTTAAAAA TGGTTTCTCAAAACAATTAAATTCAAAGAGCTTACAGTAATCAAACAAATCCTTACATTGTCTCCTCTAATTAACAAATA TGTTAGTTTTGTTTGCTGTATTAAATTTTCGCCTCCTTACATACTTTGTCCCATTCATTCCTTAAAGGTATGACTACTTC ACAAAGGGGCTTGAAGAGGTTAACATAACTCGCTTTCCAAGCGACGCAGGACTCTTTTGTTGGATGAACTTGAAAAGCTT GCTTAAGGATCAAACATTTGAAGCTGAGCTGAAGTTGTGGCGTGTGATCATGAATGAGGTGAAGCTCAACGTATCGCCAG GCTCATCTTTTTGTTGCTTCGAGCCTGGTTGGTTTAGGGTTTGCTTTGCTAACATGGATAATGAAACTGTGGAAGTCGCT CTCAACAGGATCCGGACATTCATAGGCAAGGAAACAAAGAACCAAGTGAAGATCAAACGTTGGCAACCGAATCTCAAACT CAGTTTCTCCTCGAGAAAGTTTGAAGAGAGTACTGTTTTATCACCTCACATGATGTCTCCTCATTCACCAATTTCCCACT CACCCCTTGTGATTCCAGCCACTTAATCCAGTCAGATTGTCCACGTGGAAGCATCTATCTTATTTCAAGAAAATAATGTT CAAAATTCATCTAGCTTTGATTTTGTTTTTCTTCCTAGTGGGATTTTGAAATGCAAATTGTTCCAGAGTTGCTTAATTAA GATATTATAATTTATGAATTGTGTTGAGAATATGCCTATAGCTGAAATTAAGAGGAGATAATTAGTTAGGATTTAAATTT TGTTTTAAGATATTGTTTAGATTTATTTTCAAATTAGAATAAG
CDS sequence (LotjaGi3g1v0387700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGTTTGGGAAGTGATCAGAATCATCAACTTTTGTCCAAGATTGCAACCAATGACAAACATGGAGAGAATTCTCCATA CTTTGATGGGTTGATGGCTTATGAAAGAGACCAATTTCACCCTACAAAAAATCCTAATGGTGTTATCCAGCTTGGTCTAG CAGAAAATCAGCTCTGCTTTGATCTGATTGAAGAGTGGATAAGAAATAACCCCAAGGCATCAATTTGCACTCCTGAAGGA GTGCATAAGTTCAGAGAGATTGCAAACTTTCAGGACTATCATGGATTGCCAGAGTTCACAAGAGCTATGGCAAATTTTAT GTCAAAAGTGAGAGGTGGGAGGGTGAAATTTGATCCTGAGCGTATACTGATGAGTGGAGGGGCGACAGGGGCAAACGAGT TGATCATGTTCTGCTTGGCTGATCCTGGGGATGCTTTTCTTGTTCCCACACCTTATTATCCTGCATTCTTGCGTGATTTA TGTTGGCGAACTAAGGCGCAATTAATCCCTGTTCTCTGTGATAGCTCCAACAACTTCAAGATAACAAGAGAAGCTCTTGA AGCAGCTTACAACAAAGCCCAAGAGGACAACATCAATGTGAAAGGAGTGATTATAACCAACCCCTCCAACCCTTTGGGAA CCATCCTAGACAGAGACACAATGAAGAGCATCGTGAGCTTCATCAATGAGAACAACATCCATTTAATTTCTGAAGAAGTG TATGCAGCCACGGTTTTCAGATCCCCAAGCTCTTATGTGAGCGTTGCTGAAGTCATCCAAGACATGGAAGAGTGCAACAA TAATATTAATCTTGATCTCATTCACATCACTTACAGTTTGTCTAAGGACATGGGGTTCCCTGGTTTTAGAGTTGGGATAG TTTATTCATTCAATGATGGAGTTGTGAGTTGTGGAAGGAAAATGTCAAGCTTTGGGTTAGTCTCCTCTCAGACTCAACAC ATGCTGGCTTCAATGCTTTCAAATGACAAATTTGTGGACAATTTTCTCAAGGAGAATTCAAGGAGGTTGGCTAAAAGGTA TGACTACTTCACAAAGGGGCTTGAAGAGGTTAACATAACTCGCTTTCCAAGCGACGCAGGACTCTTTTGTTGGATGAACT TGAAAAGCTTGCTTAAGGATCAAACATTTGAAGCTGAGCTGAAGTTGTGGCGTGTGATCATGAATGAGGTGAAGCTCAAC GTATCGCCAGGCTCATCTTTTTGTTGCTTCGAGCCTGGTTGGTTTAGGGTTTGCTTTGCTAACATGGATAATGAAACTGT GGAAGTCGCTCTCAACAGGATCCGGACATTCATAGGCAAGGAAACAAAGAACCAAGTGAAGATCAAACGTTGGCAACCGA ATCTCAAACTCAGTTTCTCCTCGAGAAAGTTTGAAGAGAGTACTGTTTTATCACCTCACATGATGTCTCCTCATTCACCA ATTTCCCACTCACCCCTTGTGATTCCAGCCACTTAA
Protein sequence (LotjaGi3g1v0387700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGLGSDQNHQLLSKIATNDKHGENSPYFDGLMAYERDQFHPTKNPNGVIQLGLAENQLCFDLIEEWIRNNPKASICTPEG VHKFREIANFQDYHGLPEFTRAMANFMSKVRGGRVKFDPERILMSGGATGANELIMFCLADPGDAFLVPTPYYPAFLRDL CWRTKAQLIPVLCDSSNNFKITREALEAAYNKAQEDNINVKGVIITNPSNPLGTILDRDTMKSIVSFINENNIHLISEEV YAATVFRSPSSYVSVAEVIQDMEECNNNINLDLIHITYSLSKDMGFPGFRVGIVYSFNDGVVSCGRKMSSFGLVSSQTQH MLASMLSNDKFVDNFLKENSRRLAKRYDYFTKGLEEVNITRFPSDAGLFCWMNLKSLLKDQTFEAELKLWRVIMNEVKLN VSPGSSFCCFEPGWFRVCFANMDNETVEVALNRIRTFIGKETKNQVKIKRWQPNLKLSFSSRKFEESTVLSPHMMSPHSP ISHSPLVIPAT
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 6 | 472 | 467 | 3.7E-267 | – | |
| PANTHER | 6 | 472 | 467 | 3.7E-267 | – | |
| SUPERFAMILY | 17 | 439 | 423 | 2.93E-101 | ||
| Gene3D | 37 | 433 | 397 | 3.2E-142 | ||
| Pfam | 49 | 434 | 386 | 1.4E-99 | ||
| PRINTS | 51 | 77 | 27 | 1.1E-100 | – | |
| Gene3D | 71 | 328 | 258 | 3.2E-142 | ||
| PRINTS | 84 | 100 | 17 | 1.1E-100 | – | |
| CDD | 89 | 435 | 347 | 1.38307E-59 | – | |
| PRINTS | 121 | 141 | 21 | 1.1E-100 | – | |
| PRINTS | 143 | 164 | 22 | 1.1E-100 | – | |
| Coils | 176 | 196 | 21 | - | – | |
| PRINTS | 197 | 221 | 25 | 1.1E-100 | – | |
| PRINTS | 233 | 256 | 24 | 1.1E-100 | – | |
| PRINTS | 273 | 297 | 25 | 1.1E-100 | – | |
| ProSitePatterns | 279 | 292 | 14 | - | ||
| PRINTS | 305 | 328 | 24 | 1.1E-100 | – | |
| MobiDBLite | 472 | 491 | 20 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. | ||
| Biological process | Biosynthetic process | The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones. | ||
| Molecular function | Pyridoxal phosphate binding | Interacting selectively and non-covalently with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6. |
Expression pattern of LotjaGi3g1v0387700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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