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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0390200 |
| Transcript ID | LotjaGi3g1v0390200.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | BTB/POZ domain-containing family protein; TAIR: AT2G46260.1 BTB/POZ/Kelch-associated protein; Swiss-Prot: sp|O82343|Y2626_ARATH BTB/POZ domain-containing protein At2g46260; TrEMBL-Plants: tr|A0A1J7HQD6|A0A1J7HQD6_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0390200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:78840298..78843773) extracted from Lotus japonicus Gifu genome v1.2.
GTGGGGTCAATTTCCCCAAATGCTATTGGATACGTGCAAGAATCTCAATGAGTACCTATATAAACCCTCTCCCTCATCGG TTTCATTTCTCTCGTTTTCTCTAGGGTTTATTCTTCTCTGCTGAGTGTCACATGATGAAGAATTCGAATGCTCTGCTACC TGATCAGCCAATCAATCACCATGAAAGTTCGAAATCGGAGTTCGTTGACCCTGCCTTGGTGATGGAATCTGAGCGGTCTC ATGGTGGCACTTCTTCTGAATCCGATTTTGGCTTCGCCTTCAATGACATCAATTTCTCTGACAGGCTTCTCCGAATTGAG GTCATCAACGAAAACCCGGGGGTCACCACCGCCAATTCAGATGGTGTCACCACCACCTGGGCTCGCCACAGCAAGAGGAG ACGCGAAAATGGTACCCTCTCTCTTTCTCAAGTGAAGAAATTGAACGGAATTTTTGTGTTTTTTGTTATTTCCACACATT CTTGGGTGTTTTGCATGTTTTCAACTTGTTACTGATTATAAATGTGTAAGCTTTCTTGGGGGGGGGGGGTAAAACTGTGT TGGAAAGGTTAAAGAGTGGTATGCTAACCCAAAATGCGGTGGTAATTTGTTTGAGTTTGTTATATGTACTTATAGGTTTT GAGAAATACATTGCAACATTGCTTAAATAGAGCCTTGAAAGTGATTTTGATGGATTTTGCACTGCATAAAAAGTGTTGTT CTATGCATTGGATGGGTGTGTTTGCCTGAAGTTTGCTGCTTTTTGCAATTGTGCTGTAATGATGTTCGCCTAATCGATGT GTATTCTCTTGGCTGCAGTTTCGGATCTTATTGATTTGCCTGATGAAAACCACGTTTTGAACGTGAACCAACCTGATACC GATGATGATGTGGCCTATGGAAATCAAGATAAGGAGACCTATGTAGTGTTGGAAGAATCCCCTTCTGGTATTTGAATAGC TTATACATCTTATACTTAATTTTGAGATAATAGTTATTTGGCTTAAGAGATTCTTACTTGTTCTCCTGCCCCCCTTTCTC ACTTTTTATCTTTGTTGTTGCTGTCCTGCAGCACTCTGGATTTGAGAATTGCGCTTTCTTAATGAAATGCTCCTGTGTAG AAGATAAACCAGTAGAAATCCATAGTAAAATTTAAACAAGAGTATAGTTTAACGGAGAAACCAGTGTGTTACAGAAAGTT TAACATACTCTCCCTTTGCTTGTAGTAAGGAAACAAGTGAGTTATCAGTTTATGAACAGTTTTGGTTTTAACATGGTTAA TATAGGTGATGAAGCTGCAAACATCAATGATTCAAACAGGAGCAAAGATTGCTCTCCAGCTACAGTTGTCAGAGTTAAAA CACTGCATATAAGTTCTCCTATCCTGGCTTCTAAAAGCCCTTTCTTCTATAAGGTAGATGAAGACCTCTTATTTATATAT TTCTGCCAAAAGATAAGTTTGCTTAACAAATTTTATTTACTTTTTGCAGCTTTTCTCGAATGGGATGAGGGAGTCAGAGG AGAGACATGTCACCCTCAGGATTAATGCTTCTGGTATAAACTTACCTTTTTATATCTCTGCCTCATCATTTTAATTTTCA TCAAATAGCCACCTGAATGTCATACTTATTTTCCATGTTACAGAAGAAGATGCTCTAATGGACCTGCTGAATTTTATGTA CAGTAATACCTTGAAGGCTACTGCACCATCAGCTTTGCTGGATGTGCTTATGGCTGCTGATAAATTTGAAGTTGCTTCAT GCATGAGACACTGTAGCCGGTTATTGCGAAATTTGCCCATGACACCTGAGTCTGCATTACTTTACCTGGACCTTCCTCAT ACTATCTTAATGGCCGATGCAGTCCAACCATTGACTGATGCTGCAAAGCAGTATCTTGCTGACCGATACAAGGATATAAC CAAGCAAGTGCTTGCATTTTATTTAATTTCGGTTGCATTTTCTTAAATTTATGCACCGCAATTTTTGTTTGGTTTTTTCT ATTCTATCAAGTGCTATTTAATGATTCCTCTTCATACTTCTGTTAAGTTCTTTCCATTGCCCTTGTTGGAGATATGAGAG ACTTGGGGAACAAACCATGGATTCAAAGGGACTGATGTGTGTGTTAGCATCTAATGTTTGGAACGCTCTTGTAGATAATT TTGGTGGATGGCTGTTAGTTCTCATCAATCAATTTCCTGTTATAAACATTTGAGAGGCTTTTTTTATTATGCTACTCCAT GAACTGCCTTTTGGAAAAACACCTTTTTCTCTTCCATGACATTATTGATTCTAATTGTCCATTCTTTTGAAAAAGACCAG TTTGCTGTGCTGTCATTCTTCATTCTTTTCATCTCAAAGCCATCTTTCTTTTTGAATGCTAACGTTCTTTTTTTTGACCA GGTTCCAGGAAGAGGTTATGGCCTTGCCTCTATCTGGAATAGAGGCAATTTTGGCCAGTGATGATCTCCAGGTTGCATCA GAAGATATTGTATTTGACTTTGTATTGAAGTGGGCTAAACAACATTACAACAGACTGGAAGAGAGGCGAGAAGTCTTGGC AACACGGCTTGCTCCTTTAATTCGCTTCCCCTGCATGAGCTGCCGAAAGCTTAAGAAGGTCTTAAACTGTAATGACTTTC AACAAGAGGGTGCATGCAATAAGCTTGTACTAGAAGCCGTATTTTACAAGGCGGAAACTCCACATCGTCAACGGTTGCTT GCAGCAGAAGAGACTTCTTCCTTGAACCGTTGTTTTGTGGAGAGAGCATATAAGTATCGTCCTGTTAAGGTGGTAGATTT TGTACTTCCCCAGCCGCAGTGTGTGGTGTACATGGATCTGAAGCGGGAGGAGTGTGCCTCTCTGTTCCCATCTGGCCGGA TGTATTCTCAGGCATTCCATTTGGGTGAGCAAGGTTTTTTCCTTTCAGCACATTGCAACATGGACCAACAAAACTCTTTC CATTGCTTTGGGATGTTTTTGGGAATGCAGGATAAGGGCTCAGAAAGCTTTGCTCTGGACTATGAATTTGCTGCAAGATG TAGCCCAACAAATGAGTTTGTTAGCAAGTACAGAGGCAATTACACATTCACCGGAGGGAAGGCTGTTGGGTATAGAAACT TGTTTGGAATTCCATGGACTTCGTTCATTGGTGAGGATAGCATTTTCTTCATTAAGGATGTTCTCTACCTTAGAGCTGAG CTCACCATCAGACAGCCTTGACCTATTTTTAGCTGTTAATTTTTCATTTTTTGTTGAACCTGCTGTAGTAATCATCATGT CCCAGCCACTATGAACTAGGTTATATACTGGTGTTAGACTTGTTTATATTTGCTTAGGTTATATGCTAGTGTTAGACTTG ATTTCATATCCGTTTTTTAAAATATCAACTACAAAATTTTCATCTTTTTGGTGTTTGTTGGGTTAAGATCTGAATGTGGT TTTAGAGTTCATGAAGACAAAAGTATTTTATTTACT
CDS sequence (LotjaGi3g1v0390200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATGAAGAATTCGAATGCTCTGCTACCTGATCAGCCAATCAATCACCATGAAAGTTCGAAATCGGAGTTCGTTGACCC TGCCTTGGTGATGGAATCTGAGCGGTCTCATGGTGGCACTTCTTCTGAATCCGATTTTGGCTTCGCCTTCAATGACATCA ATTTCTCTGACAGGCTTCTCCGAATTGAGGTCATCAACGAAAACCCGGGGGTCACCACCGCCAATTCAGATGGTGTCACC ACCACCTGGGCTCGCCACAGCAAGAGGAGACGCGAAAATGTTTCGGATCTTATTGATTTGCCTGATGAAAACCACGTTTT GAACGTGAACCAACCTGATACCGATGATGATGTGGCCTATGGAAATCAAGATAAGGAGACCTATGTAGTGTTGGAAGAAT CCCCTTCTGGTGATGAAGCTGCAAACATCAATGATTCAAACAGGAGCAAAGATTGCTCTCCAGCTACAGTTGTCAGAGTT AAAACACTGCATATAAGTTCTCCTATCCTGGCTTCTAAAAGCCCTTTCTTCTATAAGCTTTTCTCGAATGGGATGAGGGA GTCAGAGGAGAGACATGTCACCCTCAGGATTAATGCTTCTGAAGAAGATGCTCTAATGGACCTGCTGAATTTTATGTACA GTAATACCTTGAAGGCTACTGCACCATCAGCTTTGCTGGATGTGCTTATGGCTGCTGATAAATTTGAAGTTGCTTCATGC ATGAGACACTGTAGCCGGTTATTGCGAAATTTGCCCATGACACCTGAGTCTGCATTACTTTACCTGGACCTTCCTCATAC TATCTTAATGGCCGATGCAGTCCAACCATTGACTGATGCTGCAAAGCAGTATCTTGCTGACCGATACAAGGATATAACCA AGTTCCAGGAAGAGGTTATGGCCTTGCCTCTATCTGGAATAGAGGCAATTTTGGCCAGTGATGATCTCCAGGTTGCATCA GAAGATATTGTATTTGACTTTGTATTGAAGTGGGCTAAACAACATTACAACAGACTGGAAGAGAGGCGAGAAGTCTTGGC AACACGGCTTGCTCCTTTAATTCGCTTCCCCTGCATGAGCTGCCGAAAGCTTAAGAAGGTCTTAAACTGTAATGACTTTC AACAAGAGGGTGCATGCAATAAGCTTGTACTAGAAGCCGTATTTTACAAGGCGGAAACTCCACATCGTCAACGGTTGCTT GCAGCAGAAGAGACTTCTTCCTTGAACCGTTGTTTTGTGGAGAGAGCATATAAGTATCGTCCTGTTAAGGTGGTAGATTT TGTACTTCCCCAGCCGCAGTGTGTGGTGTACATGGATCTGAAGCGGGAGGAGTGTGCCTCTCTGTTCCCATCTGGCCGGA TGTATTCTCAGGCATTCCATTTGGGTGAGCAAGGTTTTTTCCTTTCAGCACATTGCAACATGGACCAACAAAACTCTTTC CATTGCTTTGGGATGTTTTTGGGAATGCAGGATAAGGGCTCAGAAAGCTTTGCTCTGGACTATGAATTTGCTGCAAGATG TAGCCCAACAAATGAGTTTGTTAGCAAGTACAGAGGCAATTACACATTCACCGGAGGGAAGGCTGTTGGGTATAGAAACT TGTTTGGAATTCCATGGACTTCGTTCATTGGTGAGGATAGCATTTTCTTCATTAAGGATGTTCTCTACCTTAGAGCTGAG CTCACCATCAGACAGCCTTGA
Protein sequence (LotjaGi3g1v0390200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MMKNSNALLPDQPINHHESSKSEFVDPALVMESERSHGGTSSESDFGFAFNDINFSDRLLRIEVINENPGVTTANSDGVT TTWARHSKRRRENVSDLIDLPDENHVLNVNQPDTDDDVAYGNQDKETYVVLEESPSGDEAANINDSNRSKDCSPATVVRV KTLHISSPILASKSPFFYKLFSNGMRESEERHVTLRINASEEDALMDLLNFMYSNTLKATAPSALLDVLMAADKFEVASC MRHCSRLLRNLPMTPESALLYLDLPHTILMADAVQPLTDAAKQYLADRYKDITKFQEEVMALPLSGIEAILASDDLQVAS EDIVFDFVLKWAKQHYNRLEERREVLATRLAPLIRFPCMSCRKLKKVLNCNDFQQEGACNKLVLEAVFYKAETPHRQRLL AAEETSSLNRCFVERAYKYRPVKVVDFVLPQPQCVVYMDLKREECASLFPSGRMYSQAFHLGEQGFFLSAHCNMDQQNSF HCFGMFLGMQDKGSESFALDYEFAARCSPTNEFVSKYRGNYTFTGGKAVGYRNLFGIPWTSFIGEDSIFFIKDVLYLRAE LTIRQP
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 23 | 23 | - | – | |
| MobiDBLite | 1 | 15 | 15 | - | – | |
| PANTHER | 22 | 565 | 544 | 1.1E-277 | – | |
| PANTHER | 22 | 565 | 544 | 1.1E-277 | – | |
| Gene3D | 121 | 284 | 164 | 1.2E-17 | – | |
| SMART | 152 | 252 | 101 | 5.9E-10 | ||
| ProSiteProfiles | 152 | 221 | 70 | 13.322 | ||
| CDD | 157 | 235 | 79 | 3.27971E-14 | – | |
| Pfam | 157 | 249 | 93 | 2.1E-14 | ||
| SUPERFAMILY | 161 | 249 | 89 | 1.41E-12 | ||
| SMART | 267 | 369 | 103 | 1.4E-8 | ||
| Pfam | 275 | 368 | 94 | 5.2E-11 | ||
| CDD | 277 | 386 | 110 | 5.59683E-12 | – | |
| Gene3D | 285 | 391 | 107 | 2.9E-14 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi3g1v0390200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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