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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0399700 |
| Transcript ID | LotjaGi3g1v0399700.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Ras-related protein, expressed; TAIR: AT1G01200.1 RAB GTPase homolog A3; Swiss-Prot: sp|Q9LNK1|RABA3_ARATH Ras-related protein RABA3; TrEMBL-Plants: tr|I1MKG1|I1MKG1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0399700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:80128230..80134163) extracted from Lotus japonicus Gifu genome v1.2.
ACATGATTAATTACATGCCATAATATATCAACAGAAGAAAGCATCAAGGCAATAAAGTCCGATAACAGTGCTTCATCATA CTAATAAAGGCAAGACAGACTGGACCCCATTTCCTTACCTATTTATTTTGCCACTAGTGATTCATTCAACCTTGGTCTTG TCTGGTTCATCTTTTTTTCAACCTTTTTCCCTGTTCATTTACTTGCTTCTACTTAACTCCAAGACCAGTACTTGAGTTCC CAAGTTATCTTTTTACATGCTGAGGAAGGCTAAAACCAAGGTGTGTGCCTAGTTTGGGCAAGAAAAACAGGCCCTGTTGA TTTTTTTCCTTTTTGAAGGCTCTTGCTGTCTTGAGAAGACAATGAGCCAGGGAATGAATGGGGTTGAGGCTAAGAAGAGG CAAGACAAAACAGATTATGATGTGGAGGAGAAAATAGATTATGTGTTCAAGGTGGTGGTGATAGGGGACTCAGCCGTGGG CAAGACTCAAATACTCTCAAGGTTTGCAAAGAATGAGTTCTGCTTTGACTCTAAGTCCACCATTGGAGTTGAATTCCAGA CTAGGACTGTCACTATCAATGGCAAAGTCATCAAAGCCCAGATCTGGGATACTGCTGGCCAAGAAAGGTTTATCACACCT CTCTCTCTCTCTCTCTCTGACACACACACAAACACACACACACACACACACACACACACACACACACACACTTTTGCTTG GGCTGAATATCTTGGTCTACTTTGTTTGTCTCTCATTTGAACTAAAGGGAGGATATTGAGTTTCAAAGATGGTACCAAGT CAAAGATATAACATTTTACAATGTGATACCATTTTGACTTCAGAAACATATGTTAACAAGAATCACATGATTTTGACTTA AGTACTATAAGTATTTCATTCTCCTTGATTTGGTCTCAAAATAAGCCACATTAATACTCCAACAAGGGGTTATAATGAGA AAGTGAGCAGCTTTAGTAGATTGTATTGCTTCTCAACATCTAAGCCCATTCAATTGGCCAGATTTCACATACAGATTATA CTCAGCTCTGGAAAAAGAAAACTTACTTTTTGAAATCAGGAAAAAGAAAGCTAGAACTCAATGAATTTAAAAGTTCAATA AGTACAATCCCTTAAGGCCATGATTCATCAAGCAAACTGTATGCATTAATGGCAAAGGAAATGCATTCAAAGATAAAATT TATTGACAAATGTAAGGAAAATACATGATCATTGGAATGCAGATAAATTCTCACACTTTTGACTGTAAATTTTGTTGCTG ATATAGGTACAGGGCTGTAACTAGTGCATATTACAGAGGTGCATTAGGGGCCATGCTGGTGTATGACATAACTAAGAGGC AATCCTTTGATCATATTGCGAGGTGGGTTGAGGAACTCCGAGCACACACAGATAGCTCCATTGTGATCATGCTAGTTGGG AACAAAGGTGATCTTGTGGACCTGAGAGTGGTCCCAACTGAAGATGCAGTGGAGTATGCAGAGGAGCAGGGCCTGTTCTT CTCAGAGACTTCAGCTCTCAGTGGTGAGAATGTGGAGAGTGCATTTCTCAAATTGCTAGAAGAGATCAACAGGGTGGTCT GTAAAAAGACATTGGAATGTGGTGTTGGGAAAGGGAATGGTGACAATGATGCTGCCACACTCAAAGGATCAAAGATAGCA ATAATCTCAGGTCCTGAATTGGAAATTAGTGAGATGAAGAAGTTGTCTTCATGCTCTTGTTAATCTTTTTATCAAGATCT AAGTTTACTTGATTTGAAAGTATATATATAGATGTGTCTGGTTACTAGTGGGTGAGGCTGAACTGATTTCATTTGGTCTA GCTTCCATGCTCTGAATTCAATAGTAATTGTCCTCTTTCATTATGATTATAACTTAACACAATATGCAGTAAAATTGTGC ATTGCTGGCAGTTTAGAACTTTCACTAAATTTTAAACAAATTAACTTCTAATATTTAGAACACTCACTTAAAAGGTAACT TATCTAATAAATCAAGTTGCGACTTCAAAAAAAAGGGCACAAGAATATGTTATTTTCCAGTTTCATACTTTCTAACAGAT ATACAAATGATTCATGGTTACATACTTTAAATTCAAAAAATTACATCAAGGTATAAGTGTGCTACAAAGTCATGGGTGAA TACTGAAGAAATATATCATAACTTGTTAGAACAACCATACTTTGTTTAATACTTTCCGCATTGCTAGCTCCTTCTAATTG ACTCCATTTTCTTGTTCTTCTCCTTTTTTAACATTTGGTGCTTCATACTTCTTTATAACAGAAACTCTCTTCCCTCTTAG AGCTAGGAAACTGATTGCAATATGATGTCCCACCCTGTAATTCATCTATAGAATCAAACCACAGCAAAAGAAATCACTAA TATACTAATTTAAGAGTCGCAAGGAATCAATCAGCAGTTGAAAAGTCAAAGTCAGGGTTACCCAATGAGCATGCACATCA CTAGTTGTTGGTGGATCATCAGGCAAGCAAGTTGTTAGTGGATCAATTTCCTCAGCAGCATTAGTACCACACTTGCCATC AAACAGATAACAATGATGAGATTTTTTTAATTAAAAAGTGCTAATAACAATGATAACATTTCTCTTCTGAATGAACCACT TATACAGGTGTATCCATACACCCAACACTGCAGGATTGCATTGAAGTATCTGTATCACAGTAAAGGGGGTTTCATTTGGC CAAATTTGAGAGGGTTGAAGGACTCCTCAAAGTCAGAAGTAACTAAGACCAAGTAGCCATCTTTTATCTTTCTTTCAACC TTTAAACTGAGAACAGGCTCATATTCAGATGCTAGTCTTAGACCCACATACAAGAGATGAAATCAAATCATTACATAGTT TTCTTAAACAACTACAAGTCTACAACCACTATGTATGCATTGAATTGCAGCATAATATCACCTATCTTGATCAGAAATTC AGACTTAATAGAGTAAACTTTTAACACATTTCCTGCAGATATTGCAGCAACAACTTGTTCAGGTATCCACTTCCAAGAGC TCACAAAATTTTCCAGATCCCATCAAAGCAACCTCAGCCTACATGAAGAAGAGCAACTCCAAAGAACAGGACATGACAGA GTCCTCACAGCCACGCTGTATCCAGACCAAAACAGATGCAATCCTAGTAGAGAATCACCCATTTACTCGGGAACAAGGAA CTCATGACATCTCTCTAGGTCACTCCACCCTACAGGCAGGTATAAAAGGCTGAGACCCAGCTGAAATAAGTACACACTTC TCACTTCAAGTCCTAGAGAAATTCCAAACTCTCCAACCACTAACAAAAGGCATTAGAGTGTCTTTGCAGGACCTCTCTCG GACTTGACAATGGTGTTTGGTACCAGAGCACCCTCCCTCTCGCACTACTGGAGCTTCTTTCATCTACCCCAACATCGGAG TTCAACTGTTCTTCCTCAATGACTCTTTTTGGGTAATTTGACCAAATTAGTCTCATCAATATCTCTTTTCTTTCCGGAAT CACATCACCTATCATCTATCATATTTCTGTTTTATTAATTTCTCTTCTAGTGTAAGTGAAATTCAAGCGTGATTTATACA CACTCCAGTTTCTCTTACTTTTCAATTTTTTTTCTTATTTCTCTTTACATTTTCTGTCAAATCACATATCATATCACACA TTTTTCTCCCCTCCCTTCAAATATCATCAAGGAGGGTGGATTTGAATGGTGAACACAAAAGTATTCAATGTTACATGCCA TGAGATTCAATTGACTTCCCCATCCATGAAAATGGGGGAAACAATATAATATACTTGGTGGTTTTTGTTCCCAAAAAAAC TATATACATGATAAGTCTTTGTTTGCCAATACTTTTCCTATATCAATCATCTTTCAAATTCTAACATTTTTACATCCACC CCTAAAAACATCCCAAACAAATCACTCCTAAAGTACCAATATGAACAACATTACATGGAGGTATCCAATCCAACCAATAA ATAAATGCAATATCTAATTTGTTTGTTTATGAACAAAACAAAAACCCTCCCTAAACCTGCCAAAAAGTTTCAAAACCAAC AACATTGACATATCATCATCATCATCATCTTTCATGGACCAAGTTATTACTAGACGAGCGAGATTTCCTAGAGTTCCTTA ATCTAAACAAACCGTACAACTTCCGCAAATCCTTAACCGCAGAGAACCCCTCACCACCACACAACAACCCTTCAGGCACC GCTTCATCATCATCCCCTCCCTGCCGTCCGATCACATCCCCACACCCCCTCCCATCACCGTCCGTTTGCAGCGCCCCGAT TACCGATTTTATAGCCCGACTCGGCGAGTTCCGATTCGCGATCATCAACTCACTGATCTCCGCCGGACTCAAACTCGCTC CTTGCCGGAAAATCTCCTCCACCTGAGGAAACAGCTTGTGCTCCTTCACCCCTAGGTAGCTACTCGCTAGCGTCTTGAAC GCCGAGAAATCGCAAACCGGGAAATGGATATGCACGTCGACCCGACCCGGACGTAGCAAATTCGGGTCGATACCATCTTT GCTATTCATCGTGAAAACCATCACTCTTTCTTCACCGCAGCACGAGCTCAGAATCCCGTCCATGAAATTCTGAATCCCCG ACGCCGTCACCGCCGCTGGTTCCGATCCCACCGTCAGAAACCGGTCGAGATCCTCCACGACGATGATCGACTTCGCCGTC GTTTCGAGAAGGAGCACTTTCAGATCCGAATCGCCGCGAACCTTGGAGAGATCCACGTCGTACACATCGTAACACATGAA ATTCGCCATCGCCGCAACAAAGCTCGATTTCCCGGTGCCGGAAGGGCCATACAGCAGGAAGCTCCGTTTCCACGCGCGGC CGAGTCTCCGGTAGTATTGCTTCCCTTTCAGAAACGATTCCAGATCCGATTTGATTTTCTCCTTGAGATCTTCCTCCATC GACATGGTTTCAAACGTCGCCGGATGATTGAACGGGACCGATCTCCACCGCGTTCCGCCGCCGCCGTTGACGAACACGCG CAAATCGCGTTTCCCTTGGCTGTCAATCTCGTCGGCGACGGCGTTGATGTGGCTGAGATAAGGGCGGAGGATGCGGCGTT TATCAGCCTTTCTGATTTTCAACACAAACCCTCCGGTCCGGTCCGGTTCAGTTTTCTGGTTGAACCAGAAAATCGTGGCA CCGAGAAATTGGTCCTCTATGGTTTGATTCTGGTCGAGGCATAAAACGATGTCGTTTTGGGTGTTCCCGGTGATGAGGTT GGTGAAATCAGAGTCTTCAATCGAAGGAAGAGAATGCAAATAGAGAGAAACCTTACGATGAAGGTGGTTTCGCTGCATGC TTTCGTTGAATTCAGGAACCTTGAGGAACTGGTACACGTGGAACCAATCTTGGAACGTTCTGTGAAGTTTGTTCACGGTG TGGAACAATCCAGTTTTGAATAGGATCAAACGAATCACGAAACAAAGGAGACCAGTGATGAGGATAACGAGGAATATGGG TCTCCAAGGAACCATGGCAATTATGAAGAAACTGGGTGTATATGTGAGTGTTGTTAATCACATAGTTGGATGGTGGTGGT GGAAGAAGAAGAATCGTTGTTTGGTTTTGAGGAACAATCTACAATGGATGGAGTCTTTTATTGGTTGCAGCTATACGTGT TGTATTCTTCTATTCTATGTAGTGTTGACGTGTTTAATGTTTTGTTATCCTCCTTCAACTAATTTTCAGATTTCCATTTT CAAATTGGGAATATACCTATTTTATTATGTACACTGTGTTACGTAATCATATCTGCTATCTTAATTTTCCTTTTCAACAC GGAATTAAGAAAAAAGAGCCATGCCAATTTCTTAATTTCAATGTAATTTTTAATTTTTTTTGTGTTAGACTGATGGCCAA CTTTTTTGGTGCAA
CDS sequence (LotjaGi3g1v0399700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAGCCAGGGAATGAATGGGGTTGAGGCTAAGAAGAGGCAAGACAAAACAGATTATGATGTGGAGGAGAAAATAGATTA TGTGTTCAAGGTGGTGGTGATAGGGGACTCAGCCGTGGGCAAGACTCAAATACTCTCAAGGTTTGCAAAGAATGAGTTCT GCTTTGACTCTAAGTCCACCATTGGAGTTGAATTCCAGACTAGGACTGTCACTATCAATGGCAAAGTCATCAAAGCCCAG ATCTGGGATACTGCTGGCCAAGAAAGGTACAGGGCTGTAACTAGTGCATATTACAGAGGTGCATTAGGGGCCATGCTGGT GTATGACATAACTAAGAGGCAATCCTTTGATCATATTGCGAGGTGGGTTGAGGAACTCCGAGCACACACAGATAGCTCCA TTGTGATCATGCTAGTTGGGAACAAAGGTGATCTTGTGGACCTGAGAGTGGTCCCAACTGAAGATGCAGTGGAGTATGCA GAGGAGCAGGGCCTGTTCTTCTCAGAGACTTCAGCTCTCAGTGGTGAGAATGTGGAGAGTGCATTTCTCAAATTGCTAGA AGAGATCAACAGGGTGGTCTGTAAAAAGACATTGGAATGTGGTGTTGGGAAAGGGAATGGTGACAATGATGCTGCCACAC TCAAAGGATCAAAGATAGCAATAATCTCAGGTCCTGAATTGGAAATTAGTGAGATGAAGAAGTTGTCTTCATGCTCTTGT TAA
Protein sequence (LotjaGi3g1v0399700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSQGMNGVEAKKRQDKTDYDVEEKIDYVFKVVVIGDSAVGKTQILSRFAKNEFCFDSKSTIGVEFQTRTVTINGKVIKAQ IWDTAGQERYRAVTSAYYRGALGAMLVYDITKRQSFDHIARWVEELRAHTDSSIVIMLVGNKGDLVDLRVVPTEDAVEYA EEQGLFFSETSALSGENVESAFLKLLEEINRVVCKKTLECGVGKGNGDNDAATLKGSKIAIISGPELEISEMKKLSSCSC
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 3 | 193 | 191 | 4.4E-64 | – | |
| PANTHER | 18 | 238 | 221 | 5.5E-117 | – | |
| PANTHER | 18 | 238 | 221 | 5.5E-117 | – | |
| ProSiteProfiles | 24 | 230 | 207 | 34.481 | – | |
| SUPERFAMILY | 24 | 192 | 169 | 1.34E-57 | ||
| SMART | 26 | 192 | 167 | 1.6E-27 | – | |
| CDD | 26 | 189 | 164 | 6.50459E-117 | – | |
| TIGRFAM | 28 | 182 | 155 | 1.1E-34 | ||
| SMART | 29 | 192 | 164 | 2.5E-99 | – | |
| PRINTS | 29 | 50 | 22 | 8.4E-39 | – | |
| Pfam | 30 | 190 | 161 | 1.0E-58 | ||
| SMART | 31 | 188 | 158 | 6.4E-11 | – | |
| SMART | 34 | 232 | 199 | 1.1E-5 | – | |
| PRINTS | 52 | 68 | 17 | 8.4E-39 | – | |
| PRINTS | 70 | 92 | 23 | 8.4E-39 | – | |
| PRINTS | 132 | 145 | 14 | 8.4E-39 | – | |
| PRINTS | 167 | 189 | 23 | 8.4E-39 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | GTPase activity | Catalysis of the reaction: GTP + H2O = GDP + phosphate. | ||
| Molecular function | GTP binding | Interacting selectively and non-covalently with GTP, guanosine triphosphate. |
Expression pattern of LotjaGi3g1v0399700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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