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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0405400 |
| Transcript ID | LotjaGi3g1v0405400.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Calcium-binding endonuclease/exonuclease/phosphatase family; TAIR: AT5G54130.2 Calcium-binding endonuclease/exonuclease/phosphatase family; Swiss-Prot: sp|O81916|YC22_ARATH Uncharacterized calcium-binding protein At1g02270; TrEMBL-Plants: tr|I1KHL9|I1KHL9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0405400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:80884063..80888692) extracted from Lotus japonicus Gifu genome v1.2.
ACAGCATATCACATGAAGTGTTAACGCTTCAAGTTGTACTGTCTTGTCTCCTTTTGTTTCTTCTCGACTGCACCACTCAC CAAACTCAAACCCTTTCTCTCTATATAATCTATATGAATCACTCATTTACCCACCACAACGACAGCGATAGCAGCAAAGG GCGGTGCCAAAAACACATAAAAAGAATCTACATTTTCTTCAATCCACTCACATAACACTGCTTACCCTTTTGTACTCTGG CAAGGATCTTCAGAATGGTGAGTGTTTTTCTCTCTCAAAACTCAAAAAGTTTTGTTCTTTATGATTTTTGTTTTGTGGGG GTGTTGTTGGATTTTTGGTCTTGTTACTCATTGAGGATGTTGGTATGAATGGAATCCACTCAATCCAGGTTGTAGCTGCA GGTTCTAAGCTGAGAAGAGGGAACTGTTCTTCTCATAGTGTTGTTATCAATGATTATAATAACAGTGATGGTGAAATTTC TAGAGTTAAGAAGAGTGGGAGTTTTTCAGCACTGGGAGAGGTGAATAGAGACCATTCATGTGTTTCATTTACCACTTTCA ACATCCTAGCTCCTATTTACAAACGGATTGATCCACAGGTATGTCATGGATTTTTTTGATGCAATTCCTGTTATGTGGAG ATTTATGTCTCAATTTCTGATTTTTGTTGTGTTTTGCACTTTTGATTTAAACAGAACCAGGGCCTCCGAGAGAGTGACAC GAGATCATTCTGGTTGGCCAGGAACCAGAGGATTCTAGATGGCTTGCTTGCTGAATCATCTTCCATTATGTGCCTTCAGG TAGCAATTTCTCTCCTTTCTCTTTGGTGGTGGACAGAGGGTATTTCTCTAGTGAGCATATGATAGTATCTTTGGTTGTGT GATAGTTCAATCTACATTGATCACTGTTTTCCTCATCCAGTTATCAGTATCACTCATCCATGTTATGCTGTTTGTTTCTC GTGTAGGAATTTTGGGTCGGAAATGAAGAACTTGTTCACATGTATGAGGAGAGACTTGGAAATGCTGGCTACCATCTCTT CAAGCTCGCCCGAACCAACAACCGTGGAGATGGTAAGAGTGTGAAAATAACATTTGACTTCATATCCTTTTAAATATTTT AGTATATGTTAGGAAACCCTTCTACAACTGATTCTAAAGTCAGAATCAATTCTAAGGAGAAGCTTCTGTGAGTAGCTTCT AGTTTTTAGAATTGATTCTGAAGAAAGAGAACTTGATCCAAACATTCCATTAGATTGCTAGCTGCAATAATTGGTTACTA GTGGTTAGTTCTAGTGCTCCATCATTTTCTGGGGGATTATTTTCATTTTTCTGATTTTTTCTCATAATTTATGCAGGTCT TCTGACTGCTATACACAAAGAATATTTGAGTGTTGTAAACTATCGGGAGTTGCTTTTTAATGATTTCGGTGATCGTGTCG CACAGTTGTTACATGTTCAATCGGCTGCTCCGTTATTACCAAACCAAAAGGGCAGTCTTCACCAAGAGTTTCTGATTGTG AACACCCACTTGTTATTTCCTCATGATTCGAGCCTGTCTATAGTTAGATTGCAGCAGGTATTTGAATCCTCGGTGTATAA ACTTGTTTCTTCTTATTCATTAATGAGTTTTGTAGCCATCGTGCTTTCTATCCTAAAACTCGTCTCTCTTTTGTTTGCTT GTAGGTTTACCAAATATTACAGCATGTGGAAGCATATCAGAAAGAAAACAGGCTCAAATCCATGCCTATTATACTCTGTG GGTGAGTTTAGGGTTGGAATTTCTTGTGCTATTGGGATTTCTATAAAATGCTCAATATGTCCTTATAGTTTGAACTCCAT GTTTCTATATAATGCAGTGACTGGAATGGAAGCAAGCGTGGGCATGTTTACAAGTTCCTTAGGTCTCAGGGGTTTGTATC ATCCTATGACATTGCTAATAAATACACTGACAGTTATGCAGATGCTCACAAGGTGAAAAATCTCACTATTAGATTAAATT GTACATATGCTTCACTTTCCCATTATTAAAGAGCATAGGGTTAACAGATTTTGTTTTCATGGATTTTTATTTCAGTGGGT TAGTCACCGAAATCATAGAGGAAATATATGTGGTGTTGACTTCATTTGGCTTTTCAATCCTAACCAAGCAAGAAAGCCCT TGAAGACAAGTTGGGCTGAAGCTGTTTTTAGTATAATAAAGGTGAGTGTTAATCACCGATTGTAACATAATTTGGTTGTC TTTGTATTTCTGTCTATTTTACTTTTAAAAATAGGCATGTGAGAAGTGATAGGTTTAAGAAATAGTTCATATGAATGACT TTTACATCAGTCATACTTGTTATCAAAATTTTGTTTTTGAAAATGGTCTTGTAAATTTGGTATGCATGGATAACCTCTGT TGTTGATTCGAGGTTTTAGTGACAAAATATTTTTCCTCAGCGTTTAATTTCTGCTTTGGTTGAAGCTTGGTGAAAATTGC TGATGGACTTATCAGGGCTTTAATTCCAACTTATCTGGAACACCTAGTAACAATAATTGCATATCTATTTTTTAGTCATT CATAATCACAAGACTCCTTTTTTGCAGTGAAGAAGTAATGGGAATGTGTGCATGAACATTTTAGCTCTGCATCTAATGTT ATTTTTATTTCTCTTGTTTTGATTTTCCCCTTTTCTTTCGGATTTCAGTTCCAGTTACGAAAAGCTTCATTGTCCGAAGA TGATGCATTTGCATTTCTGAAGGGTGACAACTGTGCTGATGCTATAACATATTTTAGCTTTTCTGAAGCACTCCGTCAGG TACATAAATCTGTTGATATGTGATGAATTATAATTCGAGAACCTTGTAGCTCAATTGAAGGTTTGATCTTTTATGAGATC ACCTTTTTTTCTCCCTTACCTATATGCTGGCATCTCACATATAAACACCGGAAATGAAAAGAAGAGAAAGAAAAGGTAGC AACAAAGTACTTACTACATTATAACTTTTGCAGGTAAATTTAATTGGTGTGCCTTATGGACTATGCTTTCAACAGTTGCA AGATCTATGGAATCAAGCGGATGATGATGGAAATGGTCTCATTGACTATGAAGAATTCAAGGTAATACATGGAATGATCT TCACTTTTCAACAATGTCTGCTCACATTGTATTCAAGTTTTTTCTTGTTAAAATCTATCAGCATGGATACACTTTCCCGC CTAACTGATGGGGCTTAAGGGTTAAACTTCTGGGATTAGTGCATGTTTGGTAGCACATTTAACCTCAAAGTCACATTAAT ATATAAACTACAATATGGAGTGTCTCTACCAACGTGTTTGGGCGTGTGTCTTGGGCACATCCAAACATGGTATAAGATCA TTAGTAATACTAATATCTGTCTTTATCACACTCTTTGTGAGCTATTGAATAAAATGGTGATAATTGACTTTGCAGGAGAA GATCTGGAATTCTTCATGTCCAGAGCTTGCATTTGAAAATTTCTTGGGTTGTATGGAAGAGGCTAAAACAGAGGAGGATC AAGAAGCCATTGGTTTTAAGGTGAAAAATGCAATGTTGTTCCCACGTGAAGTGGAGAAAGGACTGTGGCCAGAAGACTAC TCTCTTTCTGATCATGCTAGGTTAACTGTTGTCTTCTCACCAGTAAGATGCCATGTTCAAGGCCACAAATTGTAGCAAGC TACTTCATGGTAGTATAAGGTATAGCTCATAGAAAATATTCACATTTAGGATAAATTTGATATGGGGGTAAAAATGGGAA TGGGAAATTTGTGGATGGACTTTTAATACAAATTTCTAAAATTTGATAAATTTCCACTTTCATTTTTAACCCCATATTAA ACATGCCACTAGTCCTTGTATATTCTGGTGTGGACCAAAAAAAAGTGGTGTATCTGTAATCAGTTATAAGCCCTGGCCAT GTGTTTTTTTCTGGCCCTGAGAAAACAGTGTGAAGATATTTTTGCAATGTGAGAAATAGATGTATCTTTTTTTTTGTCAA TCATTATTTGATTAAAACAACCTAACGACACTTACACTAATCAATTGAGATAACAAGCTCTTAATACAACTGTTCTAAAA TATAGGACATTACAATACATAGGACTCACTCAATATCCAGAAAACAAAAGAGAAAAACGTAGAAAAAAACAATAAAGCAA ACAAGCCACTGATGATGATGGGATTTAGATTTCCTGCAGTTGATTTTTTCTACGTTTGCTGCAGTCGGAGAATCACAATT GTTGGATGATATGATTGGACCACTCATATTTAAAGAAACCAACTTTATATGTGACAACTGAATTTAATCTAAGCCATAAA ATCTTCATCAGAGGCTATTAATTAGCTCTGAATGCAGTGGATTTAGGAAAATTCAACAGCAAGGAAGCTAGGTCCGATGA TGATGATGTGATGAGTGTGGGCTTGGCGTCTTCACCTCACAAATTTCCAAAATGTAAAATGCTAGTAATTCTCATTTTAG TATTTTTTTCCAACACTCTCATTAATTGTAAGTGTGTTTGGTTTGGCGTTAGAACCAACGCAAACGTGATTTCACGTATC TTAAAGCATCAACAAATAAGTTAGAATTTGACAATTCGGTTTAACATGAATTGAAGAAGCATGATTTTGA
CDS sequence (LotjaGi3g1v0405400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTTGTAGCTGCAGGTTCTAAGCTGAGAAGAGGGAACTGTTCTTCTCATAGTGTTGTTATCAATGATTATAATAACAG TGATGGTGAAATTTCTAGAGTTAAGAAGAGTGGGAGTTTTTCAGCACTGGGAGAGGTGAATAGAGACCATTCATGTGTTT CATTTACCACTTTCAACATCCTAGCTCCTATTTACAAACGGATTGATCCACAGAACCAGGGCCTCCGAGAGAGTGACACG AGATCATTCTGGTTGGCCAGGAACCAGAGGATTCTAGATGGCTTGCTTGCTGAATCATCTTCCATTATGTGCCTTCAGGA ATTTTGGGTCGGAAATGAAGAACTTGTTCACATGTATGAGGAGAGACTTGGAAATGCTGGCTACCATCTCTTCAAGCTCG CCCGAACCAACAACCGTGGAGATGGTCTTCTGACTGCTATACACAAAGAATATTTGAGTGTTGTAAACTATCGGGAGTTG CTTTTTAATGATTTCGGTGATCGTGTCGCACAGTTGTTACATGTTCAATCGGCTGCTCCGTTATTACCAAACCAAAAGGG CAGTCTTCACCAAGAGTTTCTGATTGTGAACACCCACTTGTTATTTCCTCATGATTCGAGCCTGTCTATAGTTAGATTGC AGCAGGTTTACCAAATATTACAGCATGTGGAAGCATATCAGAAAGAAAACAGGCTCAAATCCATGCCTATTATACTCTGT GGTGACTGGAATGGAAGCAAGCGTGGGCATGTTTACAAGTTCCTTAGGTCTCAGGGGTTTGTATCATCCTATGACATTGC TAATAAATACACTGACAGTTATGCAGATGCTCACAAGTGGGTTAGTCACCGAAATCATAGAGGAAATATATGTGGTGTTG ACTTCATTTGGCTTTTCAATCCTAACCAAGCAAGAAAGCCCTTGAAGACAAGTTGGGCTGAAGCTGTTTTTAGTATAATA AAGTTCCAGTTACGAAAAGCTTCATTGTCCGAAGATGATGCATTTGCATTTCTGAAGGGTGACAACTGTGCTGATGCTAT AACATATTTTAGCTTTTCTGAAGCACTCCGTCAGGTAAATTTAATTGGTGTGCCTTATGGACTATGCTTTCAACAGTTGC AAGATCTATGGAATCAAGCGGATGATGATGGAAATGGTCTCATTGACTATGAAGAATTCAAGGAGAAGATCTGGAATTCT TCATGTCCAGAGCTTGCATTTGAAAATTTCTTGGGTTGTATGGAAGAGGCTAAAACAGAGGAGGATCAAGAAGCCATTGG TTTTAAGGTGAAAAATGCAATGTTGTTCCCACGTGAAGTGGAGAAAGGACTGTGGCCAGAAGACTACTCTCTTTCTGATC ATGCTAGGTTAACTGTTGTCTTCTCACCAGTAAGATGCCATGTTCAAGGCCACAAATTGTAG
Protein sequence (LotjaGi3g1v0405400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVVAAGSKLRRGNCSSHSVVINDYNNSDGEISRVKKSGSFSALGEVNRDHSCVSFTTFNILAPIYKRIDPQNQGLRESDT RSFWLARNQRILDGLLAESSSIMCLQEFWVGNEELVHMYEERLGNAGYHLFKLARTNNRGDGLLTAIHKEYLSVVNYREL LFNDFGDRVAQLLHVQSAAPLLPNQKGSLHQEFLIVNTHLLFPHDSSLSIVRLQQVYQILQHVEAYQKENRLKSMPIILC GDWNGSKRGHVYKFLRSQGFVSSYDIANKYTDSYADAHKWVSHRNHRGNICGVDFIWLFNPNQARKPLKTSWAEAVFSII KFQLRKASLSEDDAFAFLKGDNCADAITYFSFSEALRQVNLIGVPYGLCFQQLQDLWNQADDDGNGLIDYEEFKEKIWNS SCPELAFENFLGCMEEAKTEEDQEAIGFKVKNAMLFPREVEKGLWPEDYSLSDHARLTVVFSPVRCHVQGHKL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 24 | 468 | 445 | 2.1E-220 | – | |
| PANTHER | 24 | 468 | 445 | 2.1E-220 | – | |
| Gene3D | 38 | 465 | 428 | 5.1E-35 | ||
| SUPERFAMILY | 50 | 272 | 223 | 3.4E-25 | ||
| Pfam | 82 | 281 | 200 | 3.4E-8 | ||
| SUPERFAMILY | 336 | 396 | 61 | 1.09E-6 | ||
| ProSiteProfiles | 368 | 403 | 36 | 9.13 | ||
| ProSitePatterns | 381 | 393 | 13 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Calcium ion binding | Interacting selectively and non-covalently with calcium ions (Ca2+). |
Expression pattern of LotjaGi3g1v0405400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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