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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0405600 |
| Transcript ID | LotjaGi3g1v0405600.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Chlorophyll a-b binding protein, chloroplastic; TAIR: AT3G61470.1 photosystem I light harvesting complex protein; Swiss-Prot: sp|P13869|CB12_PETHY Chlorophyll a-b binding protein, chloroplastic; TrEMBL-Plants: tr|I3T043|I3T043_LOTJA Chlorophyll a-b binding protein, chloroplastic; Found in the gene: LotjaGi3g1v0405600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:80909791..80916203) extracted from Lotus japonicus Gifu genome v1.2.
CCCACAAAATGGCTCATTGCATTGTTGTGGTTGTGGCAATTATGAATTAACACACAAGAATCTTTTTTACTATTTGTGGT GCCACTAGGGCGAAGGATGGAAGCCACAAACACTTGGTGTCTATGTGAACCACCAGATTCTGATTTTTTCAGGCAAACCT ATCCTCTAAGATTCTGCATGCCACATGGCAACTCTCCATCAAACATCTAATTCACACTCCTATCCTTTAAGATAAGAACC TTGTATACATTAACAAAATCGCATTCTCTTTCCCATTCATCATTCGATCACAAACACACATCAGCAAAAAAACTCACTAA GCCACACCGTATTACTGTCTCTCGAGGTGAAGGCCTTTCATGGCTTCAGCGTGTGCTTCCTCTGCCATTGCAACTCTTGC AATCTCTACCCCAAGGCAAGTTTCTATGTGCACACCATGTGCTTGTATTTACGTACCATTGATGTAAACAATGTCAAAGT TTCATGTATTGGCCTAGTTAAAATGGTGTGAAGTGTGAACCTTGAGTTAATGTATACTTATGTGAACCTTGATTTAATCA TTCATTGAAATACAAGCCAGTACTAAGCAAAATTTTAACAAAATAAACAATGAACTTGCATCATGCAGCTCCCAGAAGAA TGGATCACCCTTGGGAACTACAAAAGCTTTCCTTAGTGGAAGGAAGCTGAAGGTGAACACCTTTACAGCACCAGTTGGGG CAAGATCCACCACTACAGTGTGTGCAGCAGCTGAACCTGATAGGCCTCTGTGGTTCCCAGGAAGCACCCCTCCTCCATGG CTTGATGGCAGTCTCCCAGGAGATTTTGGGTTTGATCCTCTTGGTCTTTGTAAGTAACTAAGCTATCAGTATTCAAATTT GTTGCCACTGAATCACTTCTAGTATAGTAATTTTTTTTATAGGCAAATGTTAGTTGTAAGTAATGTTAGTAAATTAGTCC TCCTCAGGGTCAAACCCTGGATCTTTCACCCTTCATCCCACCCATCCGTTGTGTCTCTAACTCTTACCACTTGAGCTATC TTTCGGGGACAACAGTATAGTACTTACGTTAGCAGAACTAATTATGGACAAAATTGATTCTAGTAAAATTGCGTATGGTA CTATAGTAGGGAGTTAAAATGAAGTGATCTATGTTTGGAATCATTTATAAAAAAAATGGTTTTTGTAGAGTAATGTTGTG AAATCTAATTGTAAAATCTCAGAATTGGGTATTTTCGACGCAGAAGCTACTCTTTCTAGCTTCTAGCCTCAAAATCAACT CTCCCAAACATCTTTTTTGTCATCCAGAGTTGATTTTACACTATTCAGAATTGATTCTGAAGTTTCCTTAGTGAGAGTTC AATTAATTAACCATAAAAGTGGTGTTTTGATTCAACAGCATCTGATCCGGAGAGCCTGAGATGGAATGTCCAAGCAGAGC TTGTCCACTGCAGATGGGCAATGTTGGGTGCTGCTGGCATTTTCATCCCAGAATTTCTAACAAAGATTGGTATCCTGAAC ACCCCTTCATGGTACACTGCTGGAGAGCAGGAGTATTTCACAGACACCACCACCCTCTTCATAGTTGAGCTCATTTTCAT TGGCTGGGCTGAGGGTAGAAGGTGGGCTGACATCCTCAAGCCAGGCTCTGTCAACACTGACCCTATCTTCCCCAACAACA AGCTCACAGGAACAGATGTTGGGTACCCAGGTGGGCTTTGGTTTGACCCACTTGGTTGGGGAAGTGGTTCTCCTCAGAAG CTCAAGGAGTTGAGAACAAAGGAGATCAAGAATGGGAGACTAGCCATGTTGGCTGTGATGGGTGCTTGGTTCCAGCACAT TTACACTGGCACTGGTCCTATTGACAACCTCTTTGCCCACCTTGCTGATCCTGGCCATGCCACTGTTTTTGCTGTAAGTT CTATTAAACTGCAAGTGCTAGTTCATGATTGCATACTTTGACTTCTGTTTATTATTATGGAGCTATTTGTGCTGACTTTT CCAATTGCAACTTCAGGCTTTCACTCCCAAGTGAGAAGGGTTGGAACAACTCTAAGATTGCAAGCCTTGGAGAAACAATG TTGAACCTGTTTTACTATGTTGTAAGGGTTTGATGTTTTTAGGGAGGAGTGTTTATGTTGATGAAAAGTTGTAAACTGGC TTCTTCTATGTCATGCACAGATGGATTGTTCAATGTACAAATACCTATTTAAGTTTAGATGGTTTGGAAAATGTAAATCC AGGGAGAAATCACATTTTTGCATGGATGATAGGAATGCTATAATTATCTGATGGTAACTAGCGCAGGGGATACTAGATGC CTTGTTATATAACCTGTTAAATTTTCATTTTGCTCGGTGTTCTCCTCTTTGTCCATGATGTCCAACTCATAATTTTACGA AGAAAATTCAGGGGAAAATATATGAGTACTCTTAATAGTATCACCACATTAGTTCCTTGAAAAAAAAAAATTATCCCAAA GTATGACCATATTAGTCATTTAAATAACTTCTGACAATATTTGGGTCTCAAATATAAACAATTACCACCTAATTCATTCC CAACTCAAAAGCATGTACTTGTTTGAATAATGGCAATTGCACAGCATGCCATCACTTTGACTTCAACTGTTAATGAACTT TCATTTCCTTCTTTTTACTCTTTTACAAGCTACCTTCTATTGCAGTATCAAATTACATAATATGTGTATCAAAGAATATC TGATACCATGAATAAAAATTTACTGTAAACCAACTCATTTCAAGTTCCAAAATAAATAACCTTCATGGGGATACCAGTGT TTGCAGTACTTTCAATTTGTCAAGTGCGAAGGTTACTTCGTTATTTGCCAGGGTTTGCTGTCATCAAAACCAAAATAAAC AATGAATCCAAGGAGTTAACATGAAATAGAAAAAGAAGAATTATGTAACAAGATGCAATTGCTAGTGTCTGACATATGTA AAATAAATAAGAGCTGACATAAAACATTCAAATAACATTGAACGTTGAGGCATTCCCATAGATAGGGAAGAAGTGGGAGA TGTTATTTAGGACTAATGTTGGATCTTTGAGCAGGCGAACTCTAATACAAACCAAATTGGAGGTCAGTTCTATTCTTTTG TGTATTATCTGTAAGTTTCCTCAGAATATAAAAAGTTCCATGGAAGATTTCCTTAAAAGAAATTCCAATCCTATATAGCA ATTGCTCAGTTATTATCCTACATTTGGCATAATCTTTCTTTCCCAACATGTCCTATTTAATTCATGAACTTTCACTCTTG AAACCACACTTGTGATTTTGCTCTTGTGTGCAAATCGGTTATTTAGTTCTTCTCTTCCCTCTCTGCACCACCAGGGCCTT CAAATTTAAATATTTCAGAATCCAAAAAGGAAGAGATACAATACAAATGCAACATATCTTCTTACATTCAACTTGATCCA AGTATAGTTTGCTCTACCTCACTAACATGCTTTTAACTTAAGATTATACTTTTAATATTGTTTTCCGAATTTCCACCAAA GCTTTTATTTTACAACAGAATATTCTTCTATGTCTTTTCATCCCGTAAAACATTATGATTTTCGTTATCATCATGCTTAG CAAATATCCACCCCAAATGTTTCTTTCTTCAAAATTTATTCTTCAATTATTTTTTTAACTTACCATTATCTTGTCAGATT TTGTTTGTGACCAACATGCATCTCTTATATTCTACAGATTCTTTTGTTTTCAGTGTACAACAAAATTTAAGAACAAGCAA AAGAGTATTGTAAGTATTAAACTATTACTACAGGATATATTACCTCCAAAGCTCTTGCTCCATAGGACTTCACCATCAAT TCCAGTAAGATGTTGATCATCGAGGCGTTTCCACGATTTTATTGAGTTGACATCTCCCCAGGTGCCTTTGTCTGTCTTCT CCAAGCTAGCCACCACCACTCTAGCTCTCCTAGGCCATCCAGCTTTTCCATAAGCATGGTATCCGAACCCCCCGGCATAA CAAAGTTGTATACCCATTAGCTTCCCGCAGAAGTCATTGAGGTGATCATGGCCAGTGAAAACTGCCTTCACATCTCCTGC TGCAACCAAGGTTGTGAAGAAGCCAGAGTTCACAGAAGCAGAGCTAATTCCATCGCCATCTGGTTCCAGTTTCTGACCTG TGAAGTTTGATGAGTCAAAACTAGCATATTCCGGTAGTGGGATGTGGAAGTATGCAAGACCAGGTGCAGGTTTTTTCTGA TGAACTGGTCCATTTATGTATGCTTTCTGCAGAATTAAAAATAGTCAATCGGTCAATCCAAGTATTAAAAATGGAAAGAA CTGAAAAATAAGCCACAAGTTTAGTGAGGATCCACAGAAACTTCCATTCATAAGAAGATGTCAAATAATAAAGAGAAATA GGGGAGCGTTAGAATCAAATCTCATTGACTAGAATCACTTGTAGACAATCGATTTAAAGAATTGATTTTAATCTTAAAAT CAATTTTTGCAAAGAAGCTAGAAAGATTAGCTTATGTGGTAGACATAATCAATTTTGAGATTTTATAATTAGATTTCACA ATATTATTCTATAGAAATCAGTTTTCACATAAATGTATCCAAACATAAATCACCTCACTTTCTACTCTTTTACCAAAATC AATTATGACAACGCTGATCTAAACACGTATTTAGCTGATATTAGGAATCAAATTTATTGTAAGTGCAAGACAGCTACATT AGAGAATGGAACAGATGAGACAGTACCTGAAGCTTTGCAGAAGTTCTCTCGAACCAAAGTTGCTGGGATGGCTTGATCCA ATCATAACCAGGAATTGAAGGAACTTTGGAATAATCTCCACTATCTAGAAAGTACAGATTGAGCACCGATTTATTTTCAA AATCAGTGCCTTTAACTCCTCCAACCTCCAAGTTATAGTTCCCAAAACCATCAATGACGTGTGCTTCTGCAGGATTGAGT TTAGCTAAAGTGTTTTTCATCCCAACAATATGTTTCATCACACCTTCCCTAGAGAGGGATCCTTCCTGGTCATGGTTGCC TAGAACAGCTACCCAAGGAATGTTTGATGCAATTGCAGGAGCAAATGCAGCATCCATTGATTTAGCCGAATTCGAGGAAT CAAACCCAAAGATATTATCCCCTGTCACACCACAAAATAAATATGCACAAAATGTTATCTCATATATCAAGAATCTAAGA AACTTGTAATGGTAACCAGGCTTGTTAATAGCGCACCATAGCGCTATAGCGTAGCGCCCTGGGGTTTCACTACTACTCCA CTACTCACTGCTATTTGTCACTATAGCGCCGCAATAGCACTCAAAATAGTGTTTTTTGGGCTTACCGCTACGCTACTACG CTATCCACCATTAACAACCCTGATGGTAACTTGCATAGATGTGCAAAATTGCAAATAATACAGTTAAATGAAATTACAGG CTCCAAAATAGTATAGTGCTAACACAAATTCATTTCATTTCCATCCAGTAACAAGTATTTGGAACAACAACATGCCCTTT ATTATTGATTGTTAAGAGATGTTTTAGTTTCCCTAGTAACAAAACATGTTGACATATTCTTCACAGTGACTATAATATCA AATTACTGGGGTGTCAAATATCAAATATTGTTACCAAAAAAGGAGAAACATTTACACATGAAAGAATGAAGGGAAAAAGT TCATTTTTTTTCCTAAAGGCAGTAAACAAAAAGTTGCAATCAGAAAGAAATGAAAACAAGGAGCTAAAAAGAGGACAAGT ATGGAATACCAGTGAAGACAATAAGATCGGGCTTCTCAGCAAGAATCATCCTGTGAATGAAAGCAGTGGTGTTAAGGTCA GAACAAGTAGCATTCTGGGAAGTGAGCACATCCAAGCAAAGTGTGGTCTTGCCATCTGCATAGTGCATGTCTGCAACCTG CAATATCTTGAATTCTCCATTTTCTCCAAACTGAAGCTTCTGGTTCTGTTGCAGTGGTGGGAAAGATTGTTTCTCCCCCA AGACACACATAGGAACCGAACAAAACCATAAGACAAACAACATGAAAACCATGAAATCCAAACCCATTTTCCTCTTGGTG CCAAAATTGTTTCTTTTACTCAGGATTATCACTGTTGTGGGAATTTGGGTGCCAAAGAACAATCAGAATGTGAACTTTAA TAGAAAACGTTCCTCTTGGACGGCTATGGATGCTGAAGCTGAAGAAAGTGGCAAGAAGGTACTCCAAGTTTGAGTGGAGA GACTTGGAAAGCAAAAGTATAGTCTTATCAAAAGTATAGTCTTATCTTTTATCTTGTTGTTGAATGTTGATTAAACCAGT TTCATTGATGTGTTTCTAGGAGAAAGGAAAACGACAAAGTAGGCTATATATATATATATAAATAATTAATTGCATTAGAC TTGCATAGTGATA
CDS sequence (LotjaGi3g1v0405600.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTGGGTGCTGCTGGCATTTTCATCCCAGAATTTCTAACAAAGATTGGTATCCTGAACACCCCTTCATGGTACACTGC TGGAGAGCAGGAGTATTTCACAGACACCACCACCCTCTTCATAGTTGAGCTCATTTTCATTGGCTGGGCTGAGGGTAGAA GGTGGGCTGACATCCTCAAGCCAGGCTCTGTCAACACTGACCCTATCTTCCCCAACAACAAGCTCACAGGAACAGATGTT GGGTACCCAGGTGGGCTTTGGTTTGACCCACTTGGTTGGGGAAGTGGTTCTCCTCAGAAGCTCAAGGAGTTGAGAACAAA GGAGATCAAGAATGGGAGACTAGCCATGTTGGCTGTGATGGGTGCTTGGTTCCAGCACATTTACACTGGCACTGGTCCTA TTGACAACCTCTTTGCCCACCTTGCTGATCCTGGCCATGCCACTGTTTTTGCTGCTTTCACTCCCAAGTGA
Protein sequence (LotjaGi3g1v0405600.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLGAAGIFIPEFLTKIGILNTPSWYTAGEQEYFTDTTTLFIVELIFIGWAEGRRWADILKPGSVNTDPIFPNNKLTGTDV GYPGGLWFDPLGWGSGSPQKLKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFAAFTPK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 152 | 152 | 4.7E-94 | – | |
| SUPERFAMILY | 1 | 154 | 154 | 4.97E-38 | – | |
| PANTHER | 1 | 152 | 152 | 4.7E-94 | ||
| Pfam | 1 | 126 | 126 | 3.7E-31 | ||
| Gene3D | 1 | 146 | 146 | 4.3E-59 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Photosynthesis, light harvesting | Absorption and transfer of the energy absorbed from light photons between photosystem reaction centers. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. |
Expression pattern of LotjaGi3g1v0405600.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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