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IPR022796 is a Chlorophyll A-B binding protein.
<p>The light-harvesting complex (LHC) consists of chlorophylls A and B and the chlorophyll A-B binding protein. LHC functions as a light receptor that captures and delivers excitation energy to photosystems I and II with which it is closely associated. Under changing light conditions, the reversible phosphorylation of light harvesting chlorophyll a/b binding proteins (LHCII) represents a system for balancing the excitation energy between the two photosystems [[cite:PUB00015383]].</p> <p>The N terminus of the chlorophyll A-B binding protein extends into the stroma where it is involved with adhesion of granal membranes and photo-regulated by reversible phosphorylation of its threonine residues [[cite:PUB00015384]]. Both these processes are believed to mediate the distribution of excitation energy between photosystems I and II.</p> <p>This family also includes the photosystem II protein PsbS, which plays a role in energy-dependent quenching that increases thermal dissipation of excess absorbed light energy in the photosystem [[cite:PUB00015385]].</p>
This description is obtained from EB-eye REST.
| Transcript | Name | Description | Predicted domains | Domain count |
|---|---|---|---|---|
| – | PREDICTED: LOW QUALITY PROTEIN: chlorophyll a-b binding protein CP29.1, chloroplastic-like [Cicer arietinum] gi|502147415|ref|XP_004506774.1| | 12 | ||
| – | PREDICTED: chlorophyll a-b binding protein 13, chloroplastic-like [Cicer arietinum] gi|502084262|ref|XP_004487657.1| | 11 | ||
| – | PREDICTED: chlorophyll a-b binding protein 13, chloroplastic-like [Vitis vinifera] gi|225461315|ref|XP_002284493.1| | 14 | ||
| – | 8 | |||
| – | 8 | |||
| – | PREDICTED: chlorophyll a-b binding protein 7, chloroplastic-like isoform X2 [Cicer arietinum] gi|502086073|ref|XP_004488100.1| | 12 | ||
| – | PREDICTED: chlorophyll a-b binding protein P4, chloroplastic-like [Glycine max] gi|356516812|ref|XP_003527087.1| | 8 | ||
| – | Photosystem II 22 kDa protein [Medicago truncatula] gi|357463499|ref|XP_003602031.1| | 10 | ||
| – | Photosystem II 22 kDa protein [Medicago truncatula] gi|357463499|ref|XP_003602031.1| | 11 | ||
| – | PREDICTED: chlorophyll a-b binding protein 3, chloroplastic-like [Glycine max] gi|356501755|ref|XP_003519689.1| | 15 | ||
| – | Chlorophyll a-b binding protein [Medicago truncatula] gi|357465507|ref|XP_003603038.1| | 11 | ||
| – | PREDICTED: chlorophyll a-b binding protein CP26, chloroplastic-like [Cicer arietinum] gi|502162710|ref|XP_004512591.1| | 8 | ||
| – | Chlorophyll a/b binding protein [Medicago truncatula] gi|357495319|ref|XP_003617948.1| | 8 | ||
| – | PREDICTED: chlorophyll a-b binding protein 13, chloroplastic-like [Vitis vinifera] gi|225461315|ref|XP_002284493.1| | 14 | ||
| – | PREDICTED: chlorophyll a-b binding protein 7, chloroplastic-like isoform 1 [Glycine max] gi|356559462|ref|XP_003548018.1| | 14 | ||
| – | PREDICTED: chlorophyll a-b binding protein CP24 10A, chloroplastic-like [Solanum lycopersicum] gi|460369476|ref|XP_004230588.1| | 7 | ||
| – | Uncharacterized protein isoform 1 [Theobroma cacao] gi|508784362|gb|EOY31618.1| | 7 | ||
| – | Stress enhanced protein 2 [Populus trichocarpa] gi|224081248|ref|XP_002306351.1| | 10 | ||
| – | PREDICTED: chlorophyll a-b binding protein type 1 member F3, chloroplastic-like isoform X2 [Cicer arietinum] gi|502126497|ref|XP_004499329.1| | 8 | ||
| – | PREDICTED: chlorophyll a-b binding protein type 1 member F3, chloroplastic-like isoform X2 [Cicer arietinum] gi|502126497|ref|XP_004499329.1| | 8 | ||
| – | PREDICTED: chlorophyll a-b binding protein type 1 member F3, chloroplastic-like isoform X2 [Cicer arietinum] gi|502126497|ref|XP_004499329.1| | 11 | ||
| – | PREDICTED: chlorophyll a-b binding protein CP29.3, chloroplastic-like [Fragaria vesca subsp]. vesca] gi|470143965|ref|XP_004307637.1| | 12 | ||
| – | PREDICTED: chlorophyll a-b binding protein CP29.3, chloroplastic-like [Glycine max] gi|356568441|ref|XP_003552419.1| | 12 | ||
| – | PREDICTED: chlorophyll a-b binding protein 7, chloroplastic-like isoform X2 [Cicer arietinum] gi|502086073|ref|XP_004488100.1| | 8 | ||
| – | Chlorophyll a-b binding protein, chloroplastic; TAIR: AT2G05100.1 photosystem II light harvesting complex protein 2.1; Swiss-Prot: sp|P27520|CB215_PEA Chlorophyll a-b binding protein 215, chloroplastic; TrEMBL-Plants: tr|I3T0E0|I3T0E0_LOTJA Chlorophyll a-b binding protein, chloroplastic; Found in the gene: LotjaGi1g1v0009300 | 8 | ||
| – | Chlorophyll a-b binding protein, chloroplastic; TAIR: AT3G27690.2 photosystem II light harvesting complex protein 2.3; Swiss-Prot: sp|P27520|CB215_PEA Chlorophyll a-b binding protein 215, chloroplastic; TrEMBL-Plants: tr|I3T0E0|I3T0E0_LOTJA Chlorophyll a-b binding protein, chloroplastic; Found in the gene: LotjaGi1g1v0009300 | 8 | ||
| – | Chlorophyll a-b binding protein, chloroplastic; TAIR: AT3G27690.2 photosystem II light harvesting complex protein 2.3; Swiss-Prot: sp|P27520|CB215_PEA Chlorophyll a-b binding protein 215, chloroplastic; TrEMBL-Plants: tr|I3T0E0|I3T0E0_LOTJA Chlorophyll a-b binding protein, chloroplastic; Found in the gene: LotjaGi1g1v0009300 | 8 | ||
| – | Chlorophyll a-b binding protein, chloroplastic; TAIR: AT1G61520.1 PSI type III chlorophyll a/b-binding protein; Swiss-Prot: sp|Q32904|CB23_PEA Chlorophyll a-b binding protein 3, chloroplastic; TrEMBL-Plants: tr|I1JJU8|I1JJU8_SOYBN Chlorophyll a-b binding protein, chloroplastic; Found in the gene: LotjaGi1g1v0172100 | 15 | ||
| – | Chlorophyll a-b binding protein, chloroplastic; TAIR: AT3G47470.1 light-harvesting chlorophyll-protein complex I subunit A4; Swiss-Prot: sp|Q9SQL2|CB24_PEA Chlorophyll a-b binding protein P4, chloroplastic; TrEMBL-Plants: tr|I3S9Y6|I3S9Y6_LOTJA Chlorophyll a-b binding protein, chloroplastic; Found in the gene: LotjaGi1g1v0220700 | 11 | ||
| – | Chlorophyll a-b binding protein, chloroplastic; TAIR: AT1G44575.1 Chlorophyll A-B binding family protein; Swiss-Prot: sp|Q02060|PSBS_SPIOL Photosystem II 22 kDa protein, chloroplastic; TrEMBL-Plants: tr|I3SSA4|I3SSA4_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0260800 | 10 | ||
| – | Chlorophyll a-b binding protein, chloroplastic; TAIR: AT1G45474.1 photosystem I light harvesting complex protein 5; Swiss-Prot: sp|Q9C639|LHCA5_ARATH Photosystem I chlorophyll a/b-binding protein 5, chloroplastic; TrEMBL-Plants: tr|I3T4S4|I3T4S4_LOTJA Chlorophyll a-b binding protein, chloroplastic; Found in the gene: LotjaGi1g1v0354800 | 11 | ||
| – | Chlorophyll a-b binding protein, chloroplastic; TAIR: AT3G54890.1 chlorophyll a-b binding protein 6; Swiss-Prot: sp|P12360|CB11_SOLLC Chlorophyll a-b binding protein 6A, chloroplastic; TrEMBL-Plants: tr|I3S050|I3S050_LOTJA Chlorophyll a-b binding protein, chloroplastic; Found in the gene: LotjaGi2g1v0103000 | 14 | ||
| – | Chlorophyll a-b binding protein, chloroplastic; TAIR: AT3G47470.1 light-harvesting chlorophyll-protein complex I subunit A4; Swiss-Prot: sp|Q9SQL2|CB24_PEA Chlorophyll a-b binding protein P4, chloroplastic; TrEMBL-Plants: tr|I3S9Y6|I3S9Y6_LOTJA Chlorophyll a-b binding protein, chloroplastic; Found in the gene: LotjaGi2g1v0118900_LC | 8 | ||
| – | Chlorophyll a-b binding protein, chloroplastic; TAIR: AT1G29930.1 chlorophyll A/B binding protein 1; Swiss-Prot: sp|P27495|CB24_TOBAC Chlorophyll a-b binding protein 40, chloroplastic; TrEMBL-Plants: tr|A0A089WZX0|A0A089WZX0_KALFE Chlorophyll a-b binding protein, chloroplastic; Found in the gene: LotjaGi2g1v0128900 | 14 | ||
| – | Chlorophyll a-b binding protein, chloroplastic; TAIR: AT1G29930.1 chlorophyll A/B binding protein 1; Swiss-Prot: sp|P27492|CB21_TOBAC Chlorophyll a-b binding protein 16, chloroplastic; TrEMBL-Plants: tr|A0A089WZX0|A0A089WZX0_KALFE Chlorophyll a-b binding protein, chloroplastic; Found in the gene: LotjaGi2g1v0128900 | 12 | ||
| – | Chlorophyll a-b binding protein, chloroplastic; TAIR: AT1G29930.1 chlorophyll A/B binding protein 1; Swiss-Prot: sp|P07369|CB2G_SOLLC Chlorophyll a-b binding protein 3C, chloroplastic; TrEMBL-Plants: tr|Q1KLZ3|Q1KLZ3_9ROSI Chlorophyll a-b binding protein, chloroplastic; Found in the gene: LotjaGi2g1v0129100 | 8 | ||
| – | Chlorophyll a-b binding protein, chloroplastic; TAIR: AT1G29910.1 chlorophyll A/B binding protein 3; Swiss-Prot: sp|P04782|CB24_PETSP Chlorophyll a-b binding protein 25, chloroplastic; TrEMBL-Plants: tr|M1B1H4|M1B1H4_SOLTU Chlorophyll a-b binding protein, chloroplastic; Found in the gene: LotjaGi2g1v0129100 | 12 | ||
| – | Chlorophyll a-b binding protein, chloroplastic; TAIR: AT4G10340.1 light harvesting complex of photosystem II 5; Swiss-Prot: sp|Q9XF89|CB5_ARATH Chlorophyll a-b binding protein CP26, chloroplastic; TrEMBL-Plants: tr|A0A067L139|A0A067L139_JATCU Chlorophyll a-b binding protein, chloroplastic; Found in the gene: LotjaGi2g1v0162400 | 8 | ||
| – | Chlorophyll a-b binding protein, chloroplastic; TAIR: AT5G54270.1 light-harvesting chlorophyll B-binding protein 3; Swiss-Prot: sp|P27489|CB23_SOLLC Chlorophyll a-b binding protein 13, chloroplastic; TrEMBL-Plants: tr|I3T7A0|I3T7A0_LOTJA Chlorophyll a-b binding protein, chloroplastic; Found in the gene: LotjaGi3g1v0078700 | 14 | ||
| – | Chlorophyll a-b binding protein, chloroplastic; TAIR: AT3G08940.2 light harvesting complex photosystem II; Swiss-Prot: sp|Q9XF88|CB4B_ARATH Chlorophyll a-b binding protein CP29.2, chloroplastic; TrEMBL-Plants: tr|Q9XQB2|Q9XQB2_VIGRR Chlorophyll a-b binding protein, chloroplastic; Found in the gene: LotjaGi3g1v0210100 | 12 | ||
| – | Chlorophyll a-b binding protein, chloroplastic; TAIR: AT3G08940.2 light harvesting complex photosystem II; Swiss-Prot: sp|Q9XF88|CB4B_ARATH Chlorophyll a-b binding protein CP29.2, chloroplastic; TrEMBL-Plants: tr|Q9XQB2|Q9XQB2_VIGRR Chlorophyll a-b binding protein, chloroplastic; Found in the gene: LotjaGi3g1v0210100 | 12 | ||
| – | Chlorophyll a-b binding protein, chloroplastic; TAIR: AT3G08940.2 light harvesting complex photosystem II; Swiss-Prot: sp|Q9XF88|CB4B_ARATH Chlorophyll a-b binding protein CP29.2, chloroplastic; TrEMBL-Plants: tr|Q9XQB2|Q9XQB2_VIGRR Chlorophyll a-b binding protein, chloroplastic; Found in the gene: LotjaGi3g1v0210100 | 12 | ||
| – | Chlorophyll a-b binding protein, chloroplastic; TAIR: AT5G54270.1 light-harvesting chlorophyll B-binding protein 3; Swiss-Prot: sp|P27489|CB23_SOLLC Chlorophyll a-b binding protein 13, chloroplastic; TrEMBL-Plants: tr|V7AJY3|V7AJY3_PHAVU Chlorophyll a-b binding protein, chloroplastic; Found in the gene: LotjaGi3g1v0324800 | 14 | ||
| – | Chlorophyll a-b binding protein, chloroplastic; TAIR: AT3G61470.1 photosystem I light harvesting complex protein; Swiss-Prot: sp|P10708|CB12_SOLLC Chlorophyll a-b binding protein 7, chloroplastic; TrEMBL-Plants: tr|I3T043|I3T043_LOTJA Chlorophyll a-b binding protein, chloroplastic; Found in the gene: LotjaGi3g1v0405600 | 14 | ||
| – | Chlorophyll a-b binding protein, chloroplastic; TAIR: AT3G61470.1 photosystem I light harvesting complex protein; Swiss-Prot: sp|P13869|CB12_PETHY Chlorophyll a-b binding protein, chloroplastic; TrEMBL-Plants: tr|I3T043|I3T043_LOTJA Chlorophyll a-b binding protein, chloroplastic; Found in the gene: LotjaGi3g1v0405600 | 8 | ||
| – | Chlorophyll a-b binding protein, chloroplastic; TAIR: AT2G34430.1 light-harvesting chlorophyll-protein complex II subunit B1; Swiss-Prot: sp|P27490|CB28_PEA Chlorophyll a-b binding protein 8, chloroplastic; TrEMBL-Plants: tr|Q9ZP08|Q9ZP08_CICAR Chlorophyll a-b binding protein, chloroplastic; Found in the gene: LotjaGi4g1v0026000 | 13 | ||
| – | Chlorophyll a-b binding protein, chloroplastic; TAIR: AT2G34420.1 photosystem II light harvesting complex protein B1B2; Swiss-Prot: sp|P27490|CB28_PEA Chlorophyll a-b binding protein 8, chloroplastic; TrEMBL-Plants: tr|Q9ZP08|Q9ZP08_CICAR Chlorophyll a-b binding protein, chloroplastic; Found in the gene: LotjaGi4g1v0026000 | 14 | ||
| – | Early light-induced protein 2, chloroplastic; TAIR: AT2G21970.1 stress enhanced protein 2; Swiss-Prot: sp|Q9SJ02|STEP2_ARATH Stress enhanced protein 2, chloroplastic; TrEMBL-Plants: tr|I1KT92|I1KT92_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0402500 | 9 | ||
| – | Early light-induced protein 2, chloroplastic; TAIR: AT2G21970.1 stress enhanced protein 2; Swiss-Prot: sp|Q9SJ02|STEP2_ARATH Stress enhanced protein 2, chloroplastic; TrEMBL-Plants: tr|I1KT92|I1KT92_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0402500 | 9 | ||
| – | Chlorophyll a-b binding protein, chloroplastic; TAIR: AT1G76570.1 Chlorophyll A-B binding family protein; Swiss-Prot: sp|P22686|CB2_CHLMO Chlorophyll a-b binding protein of LHCII type I, chloroplastic; TrEMBL-Plants: tr|C6TAC2|C6TAC2_SOYBN Chlorophyll a-b binding protein, chloroplastic; Found in the gene: LotjaGi5g1v0000500 | 11 | ||
| – | Early light-induced protein; TAIR: AT3G22840.1 Chlorophyll A-B binding family protein; Swiss-Prot: sp|P11432|ELI_PEA Early light-induced protein, chloroplastic; TrEMBL-Plants: tr|I3SE35|I3SE35_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0310100 | 9 | ||
| – | Early light-induced protein; TAIR: AT3G22840.1 Chlorophyll A-B binding family protein; Swiss-Prot: sp|P11432|ELI_PEA Early light-induced protein, chloroplastic; TrEMBL-Plants: tr|I3T6Y5|I3T6Y5_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0310100 | 9 | ||
| – | Early light-induced protein; TAIR: AT3G22840.1 Chlorophyll A-B binding family protein; Swiss-Prot: sp|P11432|ELI_PEA Early light-induced protein, chloroplastic; TrEMBL-Plants: tr|I3SMS6|I3SMS6_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0310100 | 9 | ||
| – | Chlorophyll a-b binding protein, chloroplastic; TAIR: AT2G40100.1 light harvesting complex photosystem II; Swiss-Prot: sp|Q9S7W1|CB4C_ARATH Chlorophyll a-b binding protein CP29.3, chloroplastic; TrEMBL-Plants: tr|A0A1J7IJ62|A0A1J7IJ62_LUPAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0073100 | 12 | ||
| – | Chlorophyll a-b binding protein, chloroplastic; TAIR: AT1G19150.1 PSI type II chlorophyll a/b-binding protein (Lhca2-1); Swiss-Prot: sp|Q8LCQ4|LHCA6_ARATH Photosystem I chlorophyll a/b-binding protein 6, chloroplastic; TrEMBL-Plants: tr|I3SQC8|I3SQC8_LOTJA Chlorophyll a-b binding protein, chloroplastic; Found in the gene: LotjaGi6g1v0222800 | 8 | ||
| – | Chlorophyll a-b binding protein, chloroplastic; TAIR: AT1G15820.1 light harvesting complex photosystem II subunit 6; Swiss-Prot: sp|P27524|CB4A_SOLLC Chlorophyll a-b binding protein CP24 10A, chloroplastic; TrEMBL-Plants: tr|I3SMI3|I3SMI3_LOTJA Chlorophyll a-b binding protein, chloroplastic; Found in the gene: LotjaGi6g1v0353900 | 11 |
A list of co-occurring predicted domains within the L. japonicus gene space:
| Predicted domain | Source | Observations | Saturation (%) |
|---|---|---|---|
| TRANSMEMBRANE | Phobius | 1 | 1.79 |