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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0407500 |
| Transcript ID | LotjaGi3g1v0407500.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Pectinesterase; TAIR: AT3G14310.1 pectin methylesterase 3; Swiss-Prot: sp|Q43143|PMEU1_SOLLC Pectinesterase/pectinesterase inhibitor U1; TrEMBL-Plants: tr|G7L9V7|G7L9V7_MEDTR Pectinesterase; Found in the gene: LotjaGi3g1v0407500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:81094445..81103684) extracted from Lotus japonicus Gifu genome v1.2.
CGGGCTTGGGTATACTGCACAGAGTGATTAGTATTATTAAGAAACTAAGAATCCTAAGTTAAACCCACCTCACCTTTCTT TTTTGCCTTTCCACGATTCTTATCTCTCAGTTCGCGATTTCTCTTTTTTTTTCCTAAGTTGAACCTCCTTCAAGTTAAAC CCAACTATATAGTTCTCACGATTTCTCTTATTGGAGAAACTCAATCATGGATTGAAACCTCATCTTGCAATTCCCTTTCT TCCCCACCAAATTTGAATCGATTCACTGCTTTTCAGCCATGGAAATTGAGACCTCCTTTTCATCTCGCGATTTGCCTCTT CTCCACCAAATTTGGATTGAAAAACTCCATTCTCTCTTAGAAGAAAAAAAAATCCCACCGCACACTCAGGTATGGATTGA AGCTCACTTAATCATAGATCGAAGCTCACTCAATCATGGATTGAAGGTAAGCACCTCGTTCTCATCTCTCGATTTGAGTT TCTTCTCAGATTTGGATCGAAGGCAACCGCTAATATTGTTATTTAAAGGACTTACCAATTAAAATGTAAAAAAAAACAAA AATATACTCCCTCCGTTTCATAATAATTGTTTACTTAGAGAGAAAAAATTTGTTTCACAATAACTGTCCACTTAGAATTC CAATGGAACATTAATTGATGTTTTTACATATAATGTCTCAATGAGAAGAATAAATTATGAGAGATAAAAGTACATTGTAA AAGGTAAAATAGAGAAACAAATGATATGTTTTAAAAAGTTACTAAAATTAATTGCACTTCTTAATATGTGTGCATCTTCT ATAAGTGAACAATTATATTGATACGGAAGGAGTATTAAATTAGCCGTACTTGAGAGAAGCTTAAACAAAAAATTACTTAA TAAATCTAAGCTTGAGAATTTTAATAAACAACTAGATTGTCATATCATAACGGTTACTAGAACTAGAAAAAAACAGAGAA TCCTAATGGAATGTGAAAAGACAACTAGGGAAATTACATTAGGCAATTTTTACATTACAGCTACTGTTCTACAAGATAAA GATATTCTACATGACACTTGAACATAGATTTTACGACAAAGAGAAATGCCACAGGCACACACCAATTCAGCTTTGGATCA AATTATCAGAGGGACATTGCACTTTGATACTGTAAATCCAGGAAAAGCAGTTACTAACGCCGGCCTTCAAAGAAGTAGGA TGCAAATTTAGTAGCCAACATAAGTCTTACTAGGGGTTGCTATTGGACGAGGGGATAAGCAAATTGGAAGCAGGGGAAGA CATAAAGAGAGTAGATTATAATTAATTTTTCAATTTTATCAGTTGTCTATGTTATTAGATTTCGGAAAAGAGACCCAAAT GAAACCAACACTTGGTTGTTTCTAAAATCAAACCACCACTACTTTCTAACTCACAATTTTTTTTGACAGCAACTTTCTAA CTCACAATAGCCAAACCAACAAAATCATAACAAATATATTATCAAAATCACAATTTAGCAACAACGTATACTAGAAAAAA TCACAGCACATACATATATCAAAACTACCAACACACCCCAAGGTTGAATCTTGTTTGAGTGCTTCCGAGGTAGAACTAAA TATTTCTTTTTGTTTTTTTAATGTATTTTTACAGATAAGAGTCATAAGACTAATTCTTTCGAAAAACCTGAAAATCATAT TTGATGAGTATGATTCAATTATATTTAAAAAAATCCCATTTCAGAAAAAATTTATGACAGATCAAATCAAAAAAAGTATG GAGCTATTCCATTTTTAAATGGGTACATGAGAAATCATCGTTTATTTTTGGTTTAAACCAAAACTTTGAAAGTGAGGGGA AATCAGACAGCAGGCTCTGCAATTTCATCGTTTTCAGGACTAAACCCGTGTTACCATGTTTGCATTTACCTCGTGGATGG CTTTCCAACAAATATTCTTAATTTCTTATCGTATGTTTGGGCCTCTTCCTCTTACTCATTTATATATACACCACTTGACC CAAAAAAACAATATATATGTACTCCTCCCTCTATTTATCTAATCAAAATTCGATTCCCTTCCATCTTTGCAAAAACATCA ACATAATTAATTAAACCTGATGCAAAAAGTGTTCATATCAATGGCAGAATTGCAAAGTTGCTGAGCAAGATTCGTCCAAC TTGACATTCATTAATAAAAATGCACGAGAAGATGTTAAATTGTTTGGATTTACGTTGAAGAAAGCAATTTTATTTGAGCA CGTTTTGCTAGCATTTTCCTGTTTCAAAAGCTCTGATAATAGTACAGACAATGATTATTCGTTCCTGCATAACATGCAAA AGATAAAGATTAAAATATTGCAACTTGTTTTATTTGTAGACTTTACAGATAACAGAGATATAAAAACAAAATAATAATCA TATAAAGAATGCATATGGTAAAAAATAAAAATACTACTAACTTTTTTTTTGTTTTCTATAGATTAGATTAATAATTTTCT TAAAATTTCCGAATAATAACTCAAGTGGTAAGAGTTAGAGCACATGTAGGTTGGTTGGGGAGGACCAGGAATCAATTTCT GGTGGGTGCAATTTATCTTTCCGATATAAAAAAAATAATGTACTTAAAACCCATTAAGTGCCAAATTTGAGTGATTAGAA ATAATTGTTTGAAAATTCAAGACGTACTTTTGGAAAAACTCTGTGTCTATCACACCATGGTCAAATAAAATTGACTATAT TCGGAGTGTGGTTGATTACAGTTTGTATTTTGAGTTTAATGATTGTGCACCGTCAGTGTAAAAATGTTTTACACATATAT CTAATAATTAAGTGTCACGTATTTAAAAGCATTTATGTTTCTTTTTATGTTAATTAAATTAAAAGCTTATTTTCTGATTT GACAATGAATCATTGGATGTTGTATAAAAAATGTTTATACTGACAGTGTATTACCATTAAATTATTGTTTTTTTTAGTTC AAAAACTAGTTTTTAAAAAAGAACACAAAAAATTTAATTAAGCATATGTTTTGTAAAACTGAAAAAAACCCTTGATTTAA AAATTTAAAATGAAAACAGGAAACATCTTTTTTTTTTTGCTCAAAGGAAACATCTCTAAATTATCCACCTTAAAGGAAAT AATGATAAAGGCCTGCTGCTCGGCCCATGACTCCAGCTAACTATTTTCCTTATGAAAAAAAAAAGGACCATGAAATACGA GACCATATACCAAATAATCTTAATAAGGGGTATCTATTCTAATTCTGGGCTTCACCATATCTTAAATGAATATTACTCAT CAAAATTTGAAAATATTAACACTTTGCTTGGTTAGAAAAGATTTAGGGTAAAGAAAGAAAGAAAAAAAGGAAGGAAAAAA AAGTAGAAAATAAGATGATTTTATTGTAAGTTGTTTGGAAAAGAAGAAAATAAAAAGAAAAGTGGAAGAGAAGATAAAAA TATATTTATGAAATGACATAAATATTAGTATAGGAGTATGAATAAATCATTACTTAAAGAGAAGCTACAATTCAGGAACC TTTGATTTACTTTTTCCATTTTCAGGGTATAATTTTTTAAAAACTCAACTAGTAGGTTGCCTGAACAGAAAAATCACATC TCTTGTTGTTTTTTCCCAACATAAACTAATCTCTTAGACTTTGAGATCACGTTAAGTTGGTAGAACTCTTTCAATAAATT AAATTATTTTTGATACACATCGCCTAAAGATTGAACTCTGAACTAAATGCTTAAATAGTTCAGTTATATATCTACCAACT ATTCTAGATTATGTTAGATGTGGTTGGTACCTCACTTATTCTTATATCTCATTTCCCATTTCTTTGATAAAGGTTATAAC ACTTTAAACTGAAAGCAAGCGTGTAGTCAACTTAATTTGGGAGAGAAAATTTCACTCCCACATTATTCACATTGATCCTG TTCTTATTTTCCAATATACGATGAGAGTAAACTTTAAAGTTTCAACTAAAAATATTAATTAATATCAATTAACAGTCACT CTAAACCCAACTATATAAGTAACTGTCTTTCTCCTTTCTTTGAGCACCACCACACTTCAATTTCCCCCCTCACTCTGTCT TAATTTGCTCTCAGGCCAGAGCCATGAGCAAGCTAAGACAAGCCTACGCCGGAATCTCAGATTCCGGCAACCACATTTCC CTTTCTAAGTCCAAGAAGAAGCTCATCTTAGCCCTCTTCTCCGCCCTTCTACTGGCCGCCTCCGTGGCGGCCATAGTCGC CGGAGTAAACTCCCACAAGAAAAACACCACCTCCTCCTCCAGCATCACCGCCTCCTCCCTCACCCTCTCCCACCACTCCC ACACCATAATCAAAACCGCCTGCAGCTCCACATTCTACCCTGAGCTCTGCTTCTCCGCCGTCGCCTCCGAGCCCGGCGTG ACCCACAAAGTCACCTCCCACAAAGACGTCATAAGCCTCGTCCTCAACATCACCTTCAGAGCCGTGGAGCAAAACTTCTT CACTGTGGAGAAGCTCCTCGCCAGAAGAAAAGGCCTCACCGAGAGAGAGAAGACCGCACTCCATGATTGCTTAGAAACCA TTGATGAAACCCTCGACGAGCTCAAAGAAGCGCAGAGCGATCTCAAGCTTTACCCGAACAAGAAGACTCTCTACCAGCAC GCTGATGACCTCAAAACTCTCATCTCCTCCGCCATAACCAACCAGGTAACCTGCTTAGACGGATTCTCCCACGACGGCGC CGACAAGCAGGTGAGGAAGGCTCTGGAGAAAGGGCAGATTCACGTGGAGCATATGTGCAGCAATGCTTTAGCCATGGCGA AGAACATGACTGATTCTGATATTGCAGATTTTGAGAAGAACAGTGTTGCAGGGGAGAAAACAGGGAGCAGGAAATTGATG GAGGCAGGGGAGGTTTGGCCGGAGTGGATTTCTGCGGCGGATAGGAGGCTGCTGCAGGCGGGGACAGTGAAGGCGGATGT GGTGGTGGCGGCGGATGGGAGTGGGAACTTTAAAACGGTGTCGGCTGCGGTGGCGGCGGCGCCGGAGAAGAGTAAGACGA GGTATGTGATTAAGATAAAAGCAGGGGTTTACAGAGAGAATGTGGAGGTTCCAAAGAAGAAGACGAATATCATGTTCTTG GGTGATGGTAGAACTACCACCATCATCACCGGTAGCAGAAATGTTGTTGATGGAAGCACCACTTTCCACTCTGCCACCGT TGGTAAGTTCATCTTCACCCTCTCTTTCATTTCAAATTTTAGTATCTATTTGATTTTCAGTTCAAAATAACGCGTAGTAT TTTATAAATTGAGATCACGATTTTCAGTACATATTTTTCGTCTGAAAAAACACTTTCCAGCGCTCTTATGTAAAAGTGAA CCTCTGCTAATTTGGTCTGTTGTATACTGTGTAGCGATGTTTTCTTTCTGTTCCACCATTTTTATTAAAAATAAAAAGTT TATAATGAGGTAACCGGCACATGAATATTTAAATGTCCCCACTCCCCACATAATGCATGTACAGAAGATAATGTAATGTA ATGTACATGTGTTGTGTTGTCATCCGAAAATGCTTTTCATCTTGCTTGATAAAACAAGGACAGAGTCTTAATTTCAATAA AAATAGCCAGTAGATCTGCAAAAGATAATGTCCTTTTACTGGTACCTCATTTTTTTTATGTCCAACGGTACTTCATCTTC TGTTCACATCATTTTTTTTATAACTCATAGTCTCATCATATCATATGTTATCAAGTTTCTTTATCCTGAGGGTCATATAT CTACTTTAGAAAAATTAACCCAACAACAAATTAGGATTAAACAGGTTTAAGACAAGAAGAACCAACCTATTGATATTGAG GGCCCAAATATGGTTAGAGCAATATAATGGGTAAAGGCAACAACCCGTGTTTGCTGTTAAATATCTATAATATCGGGAAA TCAAGGTTCCAGCTGTAAGATAACTGGGAACAACAATCCTGGGTCAGATAGCACCTTAATCCTATTGTTTTTCATCATAA TTGTGATTTAAGAAATCTATTTTTAGTATTTTTTTCAAACCAAACTACCATTTTCAATAAAACTAGTCAGCATGCACATG TGCTGTTCTGTATTCTGAGAATTATTTTTGGTCAAATATGGTGTCTTTTTGTCCTAATGTTTTTCTATAATTGTGTTAAG TTTAATCGAAGGGTTGTTTAAATGACTTACGATAAAATTTGGGTTAAATAATTCATCATCCAATCACATTAGAGATAAGT GAGTTGGAATTTTTATATTTTATTTATTAATTTTTTTTCAACTCATTTATCTCCAATGTGATTGGATGATAAGTTATTTA ACCCAAACTTTATCATGAGTTATTTAGACAACCCTTAATTGAAAAATTAAATTAATTTCCATATCCAGTTTTTCTTTCTC GATTTTTTCTCTGTTCAAAATATAGTACAGATCGAGCTTTCACTTTCATCAAACATGAGGTCACCCTTTTGTCAATTTTG TCTGATTTTCTGAAAAAAAGTATTTTTATCTCTTATTATAATTAATTAATTATATGTTTTTTGACGTCATAGGTAGACTG TGGTTACGTTATAATACTTGAAAAGAAACAACATAAAAATCACCTGTGTCCTTTTACTTTTTCCTATTTTATTTAATTCT TTGAGGTTCATCTAAAGTTGCACGTACTCTCTTTTAATTTTCCCCAAATTTAATCTTCATGTTAAACTTTTCCTAAGTAA ATTACTTTTATATATAATAAAACTATAAAAGTATCAGCATCCTTAATAAAGGATGTTCTTTCTGGTGGAGAAAGGGGTTG GGATACAGCTAGAAAATCTTTTCATTAATTTGGCTTTTATAATATTCCTGTTCTCTGTCTTTTTCACCATTTCCACTCCA CTATTTGAAACCGCGAACATTCCGTGATGTTTCTTTTGACCTATTTGCCTTCAATCATGCATGACTTTCTTCTAATAACT ATGATTTTTAATCATTACTAAAAAAAATCTTTAATTGTCATCCACTCTACTTTTATATTTTTCTATCACATGGAATCATT TATCAAATATTTTTCCATATCCAATTTAATCATATATTTGCTTGACTTGTCCAGAACCTCCATTTCGCTTTCACTCCAAA TCTTTTTCTTCACCTGTCATTATCTTCGATCTGTTCAAATTAAAGTCTTTCAACCTTCAATTATAACTAAAGTCCAACTT GTATGTAATTTCGTTTCATGTCACACCGCAACCTAAGCTATGCATATAGCAAAATCTCACTCACTTGTCCCCTAGTATAC ATGGCTTTGTTAAGCTAGACCACTTGGCCTAATTTGTCAATAAATGTAGTTGCCCTGAGAAAAGTCTAGCTTAAATTATG AGCAATCAATGCATGGTTGTCCGTTGTGAGCTCCTACCATCTAACCCTATCTCCTCTCAACTTTGCTCCAATAGAAGTCC ATTAAATTGTCATGAAGTAAAGTGATCTGAATCCCATCTAGTAACACTTGGACCACTTAATTTCTTTGAACCATTCAATC ACGCTAATCCTACTTATAGAACCTCTAGTTCAATTTCATTTAACCACCATAGTTAATAGCTTAGCATAGATACCATTCAG GTAATTCCACTTAATGTCATTTTGCTAGGATGAGTACGAACTCAAAGATGTACACCTCAATCTAATACACAACTTTAAAC CCACGAGTAGTTGTTTCGAGTGACATACTTAATTTCTCTTAAGTAAAGTTTTAAATTTAAATTTTGTTAAAAAAAAATCT CATTAAAAATGTTAGTCATATCATCATGATATGAATGTTGTTCACGATTCTAACAAAATTGTCATCCACATGAGCTAAGA AAACAAAAATACACAACTAGCATGCACTATCCATTGCCCCACATGATCGCTCCATCACTTTTTCCCTTGATTCATGCGCT AATGTGAACTCAGCTCTCAACTTTCAATATTCTTCATGTGAAACAAAAGTGCAGCGTTCCAAATGATGTACCTTATATAA AGTATTGTTTAGCTACACATTTAAAAGATGTGGGACTTCCTAACACCATTTCTGATATTGATTTGCACATTGCAGCCGTA GTGGGTGGAAATTTCTTGGCACGAGACATAACTTTCGAGAACACAGCAGGGTCCTCAAAGCACCAAGCAGTGGCCCTACG AGTGGGCGGGGACCTCTCCGCCTTCTACAATTGCGACATCCTGGCCTACCAAGACACACTCTACGTCCACAACAACCGCC AATTCTTCGTGAACTGCCTCATAGCAGGGACAGTCGACTTCATCTTCGGCAACTCCGCGGTGGTGTTCCAGAACTGTGAC ATCCACGCGCGGCGACCGGGCTCAGGCCAGAAGAACATGGTCACAGCCCAGGGCCGCGTGGACCCGAACCAGAACACCGG CATTGTGATCCAAAAGTGCAGGATTGGTGCCACTAAGGACTTGGAACCTGTGAAGAATAGCTTCCCTACTTATCTTGGGA GGCCATGGAAGGAGTATTCAAGGACTGTGTTCATGCAGAGTAGTATCAGTGATGTGATTGACCCTGCTGGATGGCATGAG TGGAGTGGGAACTTTGCATTAAACACTTTGGTTTACAGGGAGTATCAGAACACTGGGCCTGGTGCTGGAACCTCTAAGAG GGTTGCTTGGAAAGGGGTTAAGGTTATTACAAGTGCTTCTGAGGCCCAGGCTTTTACTCCTGGGAGTTTTATTGCTGGGT CTAATTGGTTGGGCTCTACAGGCTTTCCCTTCTCTCTTGGGTTGTAAATTGTGTGTGGAATTTGAAGTTTCAACTCTTTT TTTTTTAATTGGAGAGAATTGCTTTTTGCACACCTCCTTTTACTATTTGCATATCCCAATCTCTTATAAATTGAAAAAGA AAATATGGGTTGGGTATGTGAATAGTAAGAAAGATGTGAAAAAAGTGATTTTATTTTAATTGGTACCTATCAAGCCGTAG AATGGAACATTAAAGTTGACCTAATAGTAAAATAACAAGAAGAAAAGGGAAGTGAGAGAGGTCATTGCACAAGATGTTTA TCTGTTTGTCTATGACTTGTATTAGTTGGATTTATTGTGATATTCCATTGGTTAAATAATGATAAATGTATGTCAAGGTT TTGGCTCCCTCAAAACTGTTTTTCTTTTAATATGAGGTTATGAGATGAGATGAGAAGCTACTTCCTTCCAAGATCAGGAA AGTTCAAAGTAATAAGTTTCAACAAAGACTAACAGTCTTT
CDS sequence (LotjaGi3g1v0407500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAGCAAGCTAAGACAAGCCTACGCCGGAATCTCAGATTCCGGCAACCACATTTCCCTTTCTAAGTCCAAGAAGAAGCT CATCTTAGCCCTCTTCTCCGCCCTTCTACTGGCCGCCTCCGTGGCGGCCATAGTCGCCGGAGTAAACTCCCACAAGAAAA ACACCACCTCCTCCTCCAGCATCACCGCCTCCTCCCTCACCCTCTCCCACCACTCCCACACCATAATCAAAACCGCCTGC AGCTCCACATTCTACCCTGAGCTCTGCTTCTCCGCCGTCGCCTCCGAGCCCGGCGTGACCCACAAAGTCACCTCCCACAA AGACGTCATAAGCCTCGTCCTCAACATCACCTTCAGAGCCGTGGAGCAAAACTTCTTCACTGTGGAGAAGCTCCTCGCCA GAAGAAAAGGCCTCACCGAGAGAGAGAAGACCGCACTCCATGATTGCTTAGAAACCATTGATGAAACCCTCGACGAGCTC AAAGAAGCGCAGAGCGATCTCAAGCTTTACCCGAACAAGAAGACTCTCTACCAGCACGCTGATGACCTCAAAACTCTCAT CTCCTCCGCCATAACCAACCAGGTAACCTGCTTAGACGGATTCTCCCACGACGGCGCCGACAAGCAGGTGAGGAAGGCTC TGGAGAAAGGGCAGATTCACGTGGAGCATATGTGCAGCAATGCTTTAGCCATGGCGAAGAACATGACTGATTCTGATATT GCAGATTTTGAGAAGAACAGTGTTGCAGGGGAGAAAACAGGGAGCAGGAAATTGATGGAGGCAGGGGAGGTTTGGCCGGA GTGGATTTCTGCGGCGGATAGGAGGCTGCTGCAGGCGGGGACAGTGAAGGCGGATGTGGTGGTGGCGGCGGATGGGAGTG GGAACTTTAAAACGGTGTCGGCTGCGGTGGCGGCGGCGCCGGAGAAGAGTAAGACGAGGTATGTGATTAAGATAAAAGCA GGGGTTTACAGAGAGAATGTGGAGGTTCCAAAGAAGAAGACGAATATCATGTTCTTGGGTGATGGTAGAACTACCACCAT CATCACCGGTAGCAGAAATGTTGTTGATGGAAGCACCACTTTCCACTCTGCCACCGTTGCCGTAGTGGGTGGAAATTTCT TGGCACGAGACATAACTTTCGAGAACACAGCAGGGTCCTCAAAGCACCAAGCAGTGGCCCTACGAGTGGGCGGGGACCTC TCCGCCTTCTACAATTGCGACATCCTGGCCTACCAAGACACACTCTACGTCCACAACAACCGCCAATTCTTCGTGAACTG CCTCATAGCAGGGACAGTCGACTTCATCTTCGGCAACTCCGCGGTGGTGTTCCAGAACTGTGACATCCACGCGCGGCGAC CGGGCTCAGGCCAGAAGAACATGGTCACAGCCCAGGGCCGCGTGGACCCGAACCAGAACACCGGCATTGTGATCCAAAAG TGCAGGATTGGTGCCACTAAGGACTTGGAACCTGTGAAGAATAGCTTCCCTACTTATCTTGGGAGGCCATGGAAGGAGTA TTCAAGGACTGTGTTCATGCAGAGTAGTATCAGTGATGTGATTGACCCTGCTGGATGGCATGAGTGGAGTGGGAACTTTG CATTAAACACTTTGGTTTACAGGGAGTATCAGAACACTGGGCCTGGTGCTGGAACCTCTAAGAGGGTTGCTTGGAAAGGG GTTAAGGTTATTACAAGTGCTTCTGAGGCCCAGGCTTTTACTCCTGGGAGTTTTATTGCTGGGTCTAATTGGTTGGGCTC TACAGGCTTTCCCTTCTCTCTTGGGTTGTAA
Protein sequence (LotjaGi3g1v0407500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSKLRQAYAGISDSGNHISLSKSKKKLILALFSALLLAASVAAIVAGVNSHKKNTTSSSSITASSLTLSHHSHTIIKTAC SSTFYPELCFSAVASEPGVTHKVTSHKDVISLVLNITFRAVEQNFFTVEKLLARRKGLTEREKTALHDCLETIDETLDEL KEAQSDLKLYPNKKTLYQHADDLKTLISSAITNQVTCLDGFSHDGADKQVRKALEKGQIHVEHMCSNALAMAKNMTDSDI ADFEKNSVAGEKTGSRKLMEAGEVWPEWISAADRRLLQAGTVKADVVVAADGSGNFKTVSAAVAAAPEKSKTRYVIKIKA GVYRENVEVPKKKTNIMFLGDGRTTTIITGSRNVVDGSTTFHSATVAVVGGNFLARDITFENTAGSSKHQAVALRVGGDL SAFYNCDILAYQDTLYVHNNRQFFVNCLIAGTVDFIFGNSAVVFQNCDIHARRPGSGQKNMVTAQGRVDPNQNTGIVIQK CRIGATKDLEPVKNSFPTYLGRPWKEYSRTVFMQSSISDVIDPAGWHEWSGNFALNTLVYREYQNTGPGAGTSKRVAWKG VKVITSASEAQAFTPGSFIAGSNWLGSTGFPFSLGL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 43 | 43 | - | – | |
| Phobius | 1 | 26 | 26 | - | – | |
| PANTHER | 21 | 595 | 575 | 1.5E-283 | – | |
| PANTHER | 21 | 595 | 575 | 1.5E-283 | – | |
| TMHMM | 27 | 49 | 23 | - | – | |
| Phobius | 27 | 38 | 12 | - | – | |
| Phobius | 39 | 43 | 5 | - | – | |
| Phobius | 44 | 596 | 553 | - | – | |
| TIGRFAM | 57 | 235 | 179 | 1.2E-24 | ||
| SMART | 71 | 231 | 161 | 1.6E-36 | ||
| Gene3D | 72 | 237 | 166 | 9.9E-21 | ||
| SUPERFAMILY | 74 | 236 | 163 | 7.46E-33 | ||
| Pfam | 75 | 231 | 157 | 6.2E-29 | ||
| CDD | 78 | 236 | 159 | 3.41676E-35 | – | |
| Coils | 146 | 166 | 21 | - | – | |
| Gene3D | 279 | 596 | 318 | 4.1E-145 | ||
| SUPERFAMILY | 281 | 595 | 315 | 1.6E-122 | ||
| Pfam | 285 | 581 | 297 | 1.8E-148 | ||
| ProSitePatterns | 429 | 438 | 10 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Enzyme inhibitor activity | Binds to and stops, prevents or reduces the activity of an enzyme. | ||
| Molecular function | Pectinesterase activity | Catalysis of the reaction: pectin + n H2O = n methanol + pectate. | ||
| Biological process | Cell wall modification | The series of events leading to chemical and structural alterations of an existing cell wall that can result in loosening, increased extensibility or disassembly. |
Expression pattern of LotjaGi3g1v0407500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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