Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0411600 |
| Transcript ID | LotjaGi3g1v0411600.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Protein FLUORESCENT IN BLUE LIGHT, chloroplastic; TAIR: AT3G14110.1 Tetratricopeptide repeat (TPR)-like superfamily protein; Swiss-Prot: sp|Q940U6|FLU_ARATH Protein FLUORESCENT IN BLUE LIGHT, chloroplastic; TrEMBL-Plants: tr|I3SLI0|I3SLI0_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0411600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:81557018..81557688) extracted from Lotus japonicus Gifu genome v1.2.
ATGACAGGGTTGGTTGCTCGACAAAGGAAAGGAGAGTTACAGCGGGTAAATGAGCAACTGCTCCAGATCAATACAGCTTT AAGGAAGCAAGCCAAAATTGAGTCCTATGCCCCTAGCTTGAGTTATGCTCCAATTGGTGCTAGGATACCTGATAATGAAA TCATTGTTGACCCAAAGAAGCAGGAGCTAATTTCTAAGTTGAAAAGTGGAAAGAACTTTCTAAGGAATCAACAGCTAGAT AAAGCATTCACGGAGTTTAAGATTGCGCTTGAGCTTGCGCAGAATCTGAAGGATCCTATTGAGGAGAAAAAAGCTGCTAG AGGGCTAGGTTTGTCATCTTCCCTATTTTGCTTATTAATATGTGTTTTCTGATAGGCTCCCATACAATTACATTAGCTTT TGTGTGTTATAAATGAGTGAAACTTTTATAAGGAGACCATGAGTACAGTTTAAATATTGCATATACAGGGGCCTCACTAC AAAGACAGGGAAAGTACCGAGATGCTATTAAATACCATTCCATGGTTTTGGCCATCTCTGGAAGGGAAGGAGAGGACTCT GGAAACTCAGAAGCTTTTGGGGCAATTGCTGATTGTTACACTGAGCTTGGAGACCTTGAGAAAGCAGGGGAATACTATGA CAAGTATATTGCAATGCTGGAAAAGGACTAA
CDS sequence (LotjaGi3g1v0411600.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGACAGGGTTGGTTGCTCGACAAAGGAAAGGAGAGTTACAGCGGGTAAATGAGCAACTGCTCCAGATCAATACAGCTTT AAGGAAGCAAGCCAAAATTGAGTCCTATGCCCCTAGCTTGAGTTATGCTCCAATTGGTGCTAGGATACCTGATAATGAAA TCATTGTTGACCCAAAGAAGCAGGAGCTAATTTCTAAGTTGAAAAGTGGAAAGAACTTTCTAAGGAATCAACAGCTAGAT AAAGCATTCACGGAGTTTAAGATTGCGCTTGAGCTTGCGCAGAATCTGAAGGATCCTATTGAGGAGAAAAAAGCTGCTAG AGGGCTAGGGGCCTCACTACAAAGACAGGGAAAGTACCGAGATGCTATTAAATACCATTCCATGGTTTTGGCCATCTCTG GAAGGGAAGGAGAGGACTCTGGAAACTCAGAAGCTTTTGGGGCAATTGCTGATTGTTACACTGAGCTTGGAGACCTTGAG AAAGCAGGGGAATACTATGACAAGTATATTGCAATGCTGGAAAAGGACTAA
Protein sequence (LotjaGi3g1v0411600.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MTGLVARQRKGELQRVNEQLLQINTALRKQAKIESYAPSLSYAPIGARIPDNEIIVDPKKQELISKLKSGKNFLRNQQLD KAFTEFKIALELAQNLKDPIEEKKAARGLGASLQRQGKYRDAIKYHSMVLAISGREGEDSGNSEAFGAIADCYTELGDLE KAGEYYDKYIAMLEKD
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 2 | 176 | 175 | 6.0E-105 | – | |
| PANTHER | 2 | 176 | 175 | 6.0E-105 | – | |
| Gene3D | 58 | 176 | 119 | 4.3E-29 | ||
| ProSiteProfiles | 63 | 176 | 114 | 12.36 | ||
| SUPERFAMILY | 70 | 174 | 105 | 2.8E-17 | ||
| Pfam | 105 | 175 | 71 | 2.6E-11 | – | |
| Coils | 170 | 176 | 7 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi3g1v0411600.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…