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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0418900 |
| Transcript ID | LotjaGi3g1v0418900.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Kinase, putative; TAIR: AT1G72760.2 Protein kinase superfamily protein; Swiss-Prot: sp|Q9SW11|PUB35_ARATH U-box domain-containing protein 35; TrEMBL-Plants: tr|K7KZG0|K7KZG0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0418900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:82620054..82621126) extracted from Lotus japonicus Gifu genome v1.2.
GTATACGACAAGTGAAAAACACATCTGCAATTTTGAAAACAACGATTATAAAGTCAAAATCAATTCCAAAAAGAAACTTA TTTGAGTAGCTTCTAAGTATCATAATTGATTATAGTGAAAGAGAAGTCGAAGAGTCTCATTTCTCTTCTATAATGCTAAC TATGGTTCCAATCAAATGCAGGTTCTTGTGTTGAGCACCATAAGACATCCAAGCATGGTTCTCCTCCTCGGCGCGTGCCC GGAGTTCGGGTGCCTGGTGTACGAGTACATGGAAAACGGGAGCTTAGAAGATCGTCTGTTCCAGAAAGACAACACTCCAC CAATTCCAAGTAAAACTCGTTTCAAGATAGCAACAGAGATCGCTGCAGGCCTTCTCTTCCTCCACCAGAGAAAGCCAGAG CCACTAGTTCACCGTGACCTGAAACCCGCAAACATTCTCCTAGACAGAAACTACGTGAGCAAGATTAGCGACGTGGGCTT AGCAAGACTCGTCCCGCCTTCCGTCGCCAACAAAACCACCCAGTATCGCATGACCGGTGCCGCCGGAACGTTTTGCTACA TCGACCCGGAGTATCAGAAAACGGGGTTGTTGGGTGTGAAATCAGATATATATTCGTTTGGTGTGGTGCTGTTGCAGATT ATCACAGCGAAGGCTCCAATGGGTTTGTCGCATTTGGTGGAGGAAGCGATTGAGGATGGGAGTTTCAGAGAGATTCTTGA TCCGACGGTGGATTGGCCAGTGGAAGAGGCTATGGAGTTTGCTAAGTTGGGGTTGAAGTGTTGTGAGTTGAGACGACGTG ACAGGCCTGATCTTAGGACTGTTGTTCTGCCGGAGCTGAGTCGAATATCACGGATGTGGGACTCGGAGTAAAGCTCTCTA TGTATTTTTGAAACAAGTAATTTACAAATGGCGACGACAATAATGAAACTAATCTTACCAAGACTCAAATATCACATTAA GGACAGGTAAATCAGTGAATCCTCCCACATGCACATTATCGAAAATTGAATTCTAGACTATGTTCAAGAAACTCAATTAT CTATTTATGATGACCTTTTAGGTTGTGTGTAAT
CDS sequence (LotjaGi3g1v0418900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCAGGTTCTTGTGTTGAGCACCATAAGACATCCAAGCATGGTTCTCCTCCTCGGCGCGTGCCCGGAGTTCGGGTGCCT GGTGTACGAGTACATGGAAAACGGGAGCTTAGAAGATCGTCTGTTCCAGAAAGACAACACTCCACCAATTCCAAGTAAAA CTCGTTTCAAGATAGCAACAGAGATCGCTGCAGGCCTTCTCTTCCTCCACCAGAGAAAGCCAGAGCCACTAGTTCACCGT GACCTGAAACCCGCAAACATTCTCCTAGACAGAAACTACGTGAGCAAGATTAGCGACGTGGGCTTAGCAAGACTCGTCCC GCCTTCCGTCGCCAACAAAACCACCCAGTATCGCATGACCGGTGCCGCCGGAACGTTTTGCTACATCGACCCGGAGTATC AGAAAACGGGGTTGTTGGGTGTGAAATCAGATATATATTCGTTTGGTGTGGTGCTGTTGCAGATTATCACAGCGAAGGCT CCAATGGGTTTGTCGCATTTGGTGGAGGAAGCGATTGAGGATGGGAGTTTCAGAGAGATTCTTGATCCGACGGTGGATTG GCCAGTGGAAGAGGCTATGGAGTTTGCTAAGTTGGGGTTGAAGTGTTGTGAGTTGAGACGACGTGACAGGCCTGATCTTA GGACTGTTGTTCTGCCGGAGCTGAGTCGAATATCACGGATGTGGGACTCGGAGTAA
Protein sequence (LotjaGi3g1v0418900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MQVLVLSTIRHPSMVLLLGACPEFGCLVYEYMENGSLEDRLFQKDNTPPIPSKTRFKIATEIAAGLLFLHQRKPEPLVHR DLKPANILLDRNYVSKISDVGLARLVPPSVANKTTQYRMTGAAGTFCYIDPEYQKTGLLGVKSDIYSFGVVLLQIITAKA PMGLSHLVEEAIEDGSFREILDPTVDWPVEEAMEFAKLGLKCCELRRRDRPDLRTVVLPELSRISRMWDSE
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| ProSiteProfiles | 1 | 221 | 221 | 28.146 | ||
| Gene3D | 1 | 35 | 35 | 1.5E-5 | – | |
| PIRSF | 2 | 231 | 230 | 1.7E-30 | – | |
| PANTHER | 3 | 229 | 227 | 1.4E-155 | – | |
| PANTHER | 3 | 229 | 227 | 1.4E-155 | – | |
| SMART | 3 | 222 | 220 | 1.8E-9 | ||
| SUPERFAMILY | 3 | 217 | 215 | 7.15E-51 | ||
| Pfam | 4 | 217 | 214 | 1.1E-31 | ||
| Gene3D | 36 | 229 | 194 | 2.4E-50 | – | |
| ProSitePatterns | 77 | 89 | 13 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi3g1v0418900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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