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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0420100 |
| Transcript ID | LotjaGi3g1v0420100.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Lipoxygenase; TAIR: AT1G55020.1 lipoxygenase 1; Swiss-Prot: sp|P24095|LOXX_SOYBN Seed linoleate 9S-lipoxygenase; TrEMBL-Plants: tr|G7LIZ7|G7LIZ7_MEDTR Lipoxygenase; Found in the gene: LotjaGi3g1v0420100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:82793748..82799532) extracted from Lotus japonicus Gifu genome v1.2.
ATAAATACCACTAGCTTGTTCTTCATAGGCCATAAGCCTCTCCTTCATCTTTCAAAAGAGTAGTGTTTAGTTAACAACAT TATTAAGAGTTAGTTAGCAAAGATGTTTGGCATCTTTGACAAGAGCAAAAAGATCAAGGGCACTTTGGTGTTGATGCCCA AAAATGTGTTAGACTTGAACGCCATTGTGTCCGCCCGTCGAGGTGGTGTTCTCGGGCTTCCTAGGAGCGCACTCGGCCTC GTTATTGACGTTGCCGGCCAAGTGGTTGATGGCGCCACCGCCATCCTCAGCCGTAACATCCATGTCCAATTGATCAGTGC TACCAAAACTAATGGTCTGGTTCTCTCTTCACCCTGACTCTACTCCTACGACTTTCTTAATTATTTCTAAGTTCCTGACA AAAAAAAACATACATGCTGAGTAGGATAAGGTGCAAATGGCTATTGACTTGGACCCATAAAATATTATCTGAGGAATTTT GTTGCAATTTACATGATTCAGTGACTAATGTGAAAATTCTGTATGACATTGTATTAATTTGACTATATCATAATTCAAAA ATAATAATTAAAAATCTAATGAAAGTATACCCTCCGTTTTAAAATAACTTTCAACTTAGAGTAAAAACTTATTTCATATT AACTGTTCACTTACAATTTTAATGTAGCATTAATTAATATTTTTCCATATAATACTCTTATAAAAAGAATATATAAATGT GGAGTGATAAAAGTATACTTCAAAATAATAGTAAATTAGTAAAACATATATATATTTTATAAATTAATAATGTTAATAAT ATCTTTTAATATGTGTTTTTCTTCTCTTTCTTTCTGGATAGATTTGGAAACAGGGGTAGTGTATTTTAATAAATTACTAA ACACAATTTATGTACATTTTTTTCTCTATGTCTCACTTTTATTACTTTAAATCAGATCTCTCATTTCTATTTATTTTATT TCTTTTCTCACTCTACTAAATTTACCTGTCCACACTTTATATGAATGAATGTCTATTCACCATTATACTCTCTCTGTTTT ACAAAGGCGGTAGTTTTAGCATCTCTTCATATTTTCTAAAATATTTGTTGAATTATAATATCATGACATTTTTCTAATTT TTTTCACCCACCCCTTTACTTAATAATTTTTCTATCACATATTACATTTCATATCAACTAACCACATCTTTTTTTTATCA AACACATTATTTTTTTATTGAAAGTAGAATTTTATAGTTGCATATAATTGTCAATCTCTAGAAATATCTCTTAAGATTAC GATATCAGGTACAAAAAACGAGATCAGCAGAGATTTTTTTTCCACATCTCGAGTGATCTCTAGAAATATCTTTTAATCGC GAGATTACGTATTAGCTTACTTGGTCCGAAATGTTAAAAAATAATTATTACAAGGGCATTTCAGACATTTGACCCACAAA CTTAGGGTTTTTGGTAAAATCAATCGTCGTTCTCGCATTCACGACCATTGTTTGTTTCACTCACATAGCTTTTAGCGACT TAATTATTCTTTTTTATGCTTATCATAATTTATGTTTATGTTTTGTCAATTTGTTATGACTTACGTACCTTAGATTTAAA TATTGGTATTTTATGCATAGTTTTAATTGTCATTGTTGATTTATATAAATAATTTTTAGTAGTATTAGTATGACTTCATC ATTATTATAGTTTTAAAATATGTTTTATACAAGATAATGTCTTACGAGATTATGTTATGAGATCATGTTACGAGATTACC TCCCTCCACGACATTAGGTAATCTCTAAAGATTGACAACCTTAATTGCACCTAATACGAGTAAAACTAAATAAGGGTATT TTAGTAATATTATATTATTAATAATTTTTATCTTACTCTTTTTCTTTTTGTGTCACAACTTTAAACAATAATTTTTGTGG AATTGAGGAAGTAGATTTTTAATTATTAATATCTTGAATAAAAATAATGTTAGGTTCATCATAATTTTTACATTAATTAC TGTGACAGTGTAAAAAGTTTTACACATATATCTAATCATATCTTTCAATTTTTTATTTTAAATATTCTTAAACTCAAATT TAATTATGGCAAACAAAATTAATAAATTCTAATTTGGTGAATATGTAAAACTTTAAATTTACTCCATTTCTTACTCCCAA TTCTTTCCCTGTGAGAGTTAGCTTTGTTTCTCTTCTTCCACGTGAACCATTAACACAACCACAAACTTATACTGACCAAC ACCGGCCACCACGAAGCCAACGGCGACCACCGCGAAGCCACCTGCGTTCATTATCCTCCACGTACGATTTGGCTTGTCAT AACTTAGTATTGGTTTCCTAACATCATCTGTTTGTGTCAAGGAATTGGACAGAATAAAATAGCACAACAAGTGTTTGATA AAATGCTTAAGTCACCTAGTAAAACACTATGCTTCTTGATTCATCTTTTTTGTTTTGTAAAAAAAAATTCCTGTATCTTT TTGCAGCAAGTGGAGTTGGGTTACTTGGAGAGGAAACCTTTCTGCAGAAACATATTCCCTCATTACCAACCTTGGGAGCG AGGCAGGAGGCATACAGCGTCGAATTTGATTACGATGCCAATTTCGGAATTCCTGGAGCATTTTACATCAAAAACTATAT GCAATGCGAGTTCTTCCTTGTCAGCTTGACCCTCGAAGACATTCCCAATCACGGAACCATTCGCTTTGATTGCAACTCAT GGGTTTACAACTTTAAATTATACAATAACAGGCATCGCATTTTCTTTACCAATGATGTAAGCTCTGTGCCTAGCAGCGAG TTCTTATTCAATTCTAGTAGTAGTAATTTTCTTGAACTAACTTTCTTTTTTTGAAATATATTGAAGACATATCTCCCAGG TCAAACACCAGCAGGACTTGTTAAATACAGAAAAGAAGAATTGGAGAATTTGAGAGGAGATGGATCAGGGGAGCGCAAAG AGCATGAAAGGATTTATGACTATGATGTTTACAATGATTTGGGAAATCCAGATGGTGGTGCACCTCGCCCAACCCTTGGA GGGTCTGCCGAACTTCCCTATCCTCGCAGGGTCAGAACCGGTAGAAAATCTACCAGGACAAGTAAGATTTCTCTGTTTAT TTTTTATTTTTAATTCAATTTTGTATTTTTCAATTATGCTTTCAGTAATGTGTTACCATACTAATTTTCTTATTTGATTC TCAACAGATCGTGCAGCTGAGAAGCCAGCTGTGGACATCTATGTCCCAAGAGATGAAAATTTTGGTCACTTGAAGTCATC AGATTTTCTTACATATGGAATAAAATCTTTATCTCAGAGCGTGTTGCCTTTGTTCAAATCTGTGATTTTCGATTTGAACT TCACGCCGAATGAGTTTGATAGCTTCGATGAAGTGCGTGGACTCTATGAAGGTGGAATTAAACTTCCTACAAATATAATC AGCCAAATCAGCCCTTTGCCTGTTCTTAAGGAAATCTTTCGCACTGATGGTGAAAATGTCCTTCAATTTCCACCACCTCA TGTAATCCGAGGTACATTGTTCATCTTAATAGAATTTCATGTAGTTAACATGTCCACTGAAATAACTCATTTTATATTCA GTGTCAACAGAAAACTAGCTAGTGCATTTGTTGAATTAATCCTGTTTTAACAATTGTTTCTTTTTTTATTTTGAGAAGTT AGCAAGTCTGCATGGATGACTGATGTTGAATTTGGAAGAGAGATGATTGCTGGTGTTAATCCTAATGTGATTCGTTTGCT ACAAGTAAGTTCAAATGTTTGATTGCTAAGAATATTAATTAAACAGGAATTTATGTTGTTAATGCTAAATTCTTGTTGTT GATTCTAACATAGTGGCACTATTTGTCATCTTTCCTGACATTCTTCTTTGATGTGGCAGGAGTTCCCACCAAAAAGCACG CTAGATGTCAATGGTTTTGGTGATCAAAATAGTACACTAACAAAAGAACACTTGGAGATTAACCTTGGTGGGCTCACAGT AGATGAGGTAAGGATATAAACATCTTCAATTCTTTTGTGGCTCAAACCTATGGAATAAAGGGATTGAAATTAAATTTGTG GAACAGGCGCTTGGCGCTAAGAGATTGTTCATACTAGATTACCATGATGCTTTCATGCCTTATTTGGAGAAGATAAACAA ACTTCCATCCTCAAAGGCTTATGCCACCAGAACAATCCTGTTCTTGAAAGATGATGGGGCTTTAACCCCACTTGCCATTG AGTTGAGTCTACCACATCCAAATGGAGTTAAATATGGTGCTGAAAGCAAAGTCGTCTTACCCGCTAAAGAAGGTGCTGAA GGAACAATTTGGCTACTGGCCAAGGCTCATGTTATTGTGAATGACTCAGGCTATCATCAACTCATTACCCACTGGTATAT GAACTACACTAGCTAGATCTTCAAATAAGCTTAGTCTTTGTATGTATGATAATGGCATTATTAGTATTAATTTTTTTTTC TGATGGGGTCACAGGTTAAATACTCATGCAACGATTGAGCCGTTCGCCATAGCAACAAACAGACATCTCAGTGCCCTTCA CCCTATTAACAAGCTCTTATATCCTCACTACCGTGACACAATAAATATCAACGCACTTGCTAGAGCATCCCTGATTAATG CAGAAGGCATTATCGAGCAATCATTTTTGCCTGGAGAGTACTCTTTGGAGATTTCTTCTGTAGTTTACAAGAATTGGGTT TTCCCTGACCAAGCATTACCAGCTGATTTAATTAAGAGGTAACATTTTTAAATATAAATCACAATCTTAAGTTTTTTGTT TTAACTAACAAACATTTTGCTTGATTCAGAGGAATGGCAGTTGAGGATCCCTCTGCCCCCCATGGTGTTCGCCTTGTGTT AGAGGACTACCCTTATGCTGTTGACGGACTTGAGATATGGGATGCTATTAAGAAGTGGGTTCAAGACTACGTCTCCTTAT ATTACCCAAGTGATGATGCAGTCCAGAAAGACACTGAACTACAAGCTTGGTGGAAGGAAGTTGTGCAAAGGGCTCATGCT GACTTGAGCGACAAGCCATGGTGGCCAAAGATGCAAACTCTTGAAGAATTGATTCAATCTTGCTCTATCATCATATGGAT CGCTTCGGCTCTTCATGCAGCTGTTAATTTCGGACAATATCCTTATGGAGGTTATATCCTGAACCGGCCTACACTGAGCA GAAGATGGATCCCGGAAAATGGAACTCCGGAATATGATGAGATGGTGAAAAATCCTCAGAAGGCTTACTTGAGAACCATC ACACCGAAGTACCAGACTCTTGTTGATCTTTCTGTGATAGAGATATTGTCTAGGCATGCTTCTGATGAGATCTATCTTGG GGAGAGGGAGAATCCAAATTGGACATCTGATACAAGGGCAATACAAGCCTTCAAACAGTTTGGAACCAAGCTGCAAGAAA TTGAAGGGAATATCAATGCGAGGAACAAGGATTCTTGTTTGCTAAACCGAACTGGGCCTATTGAGCTACCCTACAGTTTG CTCCTTCGTTCTAGTGAGGAAGGGTTGACATGTAGAGGAATTCCCAACAGTATCTCTATTTGAAAGTCTATTTGGTTTCA TTATCTATTGTACTAATTCCAATAACTGAGAGACAGCGCCTCTCTGTGTATTAGTTATTGTGTGTGTGTTTGTACTAATG TATTTCAGAACTTTCGATTGCATGTAATAAAATGCATTTTCACTATGTCAGTTCTTGCTCATGCCTCTCTGCGTAGAAAT TACACAATTTTTTGTTGAATAGCGA
CDS sequence (LotjaGi3g1v0420100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTTGGCATCTTTGACAAGAGCAAAAAGATCAAGGGCACTTTGGTGTTGATGCCCAAAAATGTGTTAGACTTGAACGC CATTGTGTCCGCCCGTCGAGGTGGTGTTCTCGGGCTTCCTAGGAGCGCACTCGGCCTCGTTATTGACGTTGCCGGCCAAG TGGTTGATGGCGCCACCGCCATCCTCAGCCGTAACATCCATGTCCAATTGATCAGTGCTACCAAAACTAATGCAAGTGGA GTTGGGTTACTTGGAGAGGAAACCTTTCTGCAGAAACATATTCCCTCATTACCAACCTTGGGAGCGAGGCAGGAGGCATA CAGCGTCGAATTTGATTACGATGCCAATTTCGGAATTCCTGGAGCATTTTACATCAAAAACTATATGCAATGCGAGTTCT TCCTTGTCAGCTTGACCCTCGAAGACATTCCCAATCACGGAACCATTCGCTTTGATTGCAACTCATGGGTTTACAACTTT AAATTATACAATAACAGGCATCGCATTTTCTTTACCAATGATACATATCTCCCAGGTCAAACACCAGCAGGACTTGTTAA ATACAGAAAAGAAGAATTGGAGAATTTGAGAGGAGATGGATCAGGGGAGCGCAAAGAGCATGAAAGGATTTATGACTATG ATGTTTACAATGATTTGGGAAATCCAGATGGTGGTGCACCTCGCCCAACCCTTGGAGGGTCTGCCGAACTTCCCTATCCT CGCAGGGTCAGAACCGGTAGAAAATCTACCAGGACAAATCGTGCAGCTGAGAAGCCAGCTGTGGACATCTATGTCCCAAG AGATGAAAATTTTGGTCACTTGAAGTCATCAGATTTTCTTACATATGGAATAAAATCTTTATCTCAGAGCGTGTTGCCTT TGTTCAAATCTGTGATTTTCGATTTGAACTTCACGCCGAATGAGTTTGATAGCTTCGATGAAGTGCGTGGACTCTATGAA GGTGGAATTAAACTTCCTACAAATATAATCAGCCAAATCAGCCCTTTGCCTGTTCTTAAGGAAATCTTTCGCACTGATGG TGAAAATGTCCTTCAATTTCCACCACCTCATGTAATCCGAGTTAGCAAGTCTGCATGGATGACTGATGTTGAATTTGGAA GAGAGATGATTGCTGGTGTTAATCCTAATGTGATTCGTTTGCTACAAGAGTTCCCACCAAAAAGCACGCTAGATGTCAAT GGTTTTGGTGATCAAAATAGTACACTAACAAAAGAACACTTGGAGATTAACCTTGGTGGGCTCACAGTAGATGAGGCGCT TGGCGCTAAGAGATTGTTCATACTAGATTACCATGATGCTTTCATGCCTTATTTGGAGAAGATAAACAAACTTCCATCCT CAAAGGCTTATGCCACCAGAACAATCCTGTTCTTGAAAGATGATGGGGCTTTAACCCCACTTGCCATTGAGTTGAGTCTA CCACATCCAAATGGAGTTAAATATGGTGCTGAAAGCAAAGTCGTCTTACCCGCTAAAGAAGGTGCTGAAGGAACAATTTG GCTACTGGCCAAGGCTCATGTTATTGTGAATGACTCAGGCTATCATCAACTCATTACCCACTGGTTAAATACTCATGCAA CGATTGAGCCGTTCGCCATAGCAACAAACAGACATCTCAGTGCCCTTCACCCTATTAACAAGCTCTTATATCCTCACTAC CGTGACACAATAAATATCAACGCACTTGCTAGAGCATCCCTGATTAATGCAGAAGGCATTATCGAGCAATCATTTTTGCC TGGAGAGTACTCTTTGGAGATTTCTTCTGTAGTTTACAAGAATTGGGTTTTCCCTGACCAAGCATTACCAGCTGATTTAA TTAAGAGAGGAATGGCAGTTGAGGATCCCTCTGCCCCCCATGGTGTTCGCCTTGTGTTAGAGGACTACCCTTATGCTGTT GACGGACTTGAGATATGGGATGCTATTAAGAAGTGGGTTCAAGACTACGTCTCCTTATATTACCCAAGTGATGATGCAGT CCAGAAAGACACTGAACTACAAGCTTGGTGGAAGGAAGTTGTGCAAAGGGCTCATGCTGACTTGAGCGACAAGCCATGGT GGCCAAAGATGCAAACTCTTGAAGAATTGATTCAATCTTGCTCTATCATCATATGGATCGCTTCGGCTCTTCATGCAGCT GTTAATTTCGGACAATATCCTTATGGAGGTTATATCCTGAACCGGCCTACACTGAGCAGAAGATGGATCCCGGAAAATGG AACTCCGGAATATGATGAGATGGTGAAAAATCCTCAGAAGGCTTACTTGAGAACCATCACACCGAAGTACCAGACTCTTG TTGATCTTTCTGTGATAGAGATATTGTCTAGGCATGCTTCTGATGAGATCTATCTTGGGGAGAGGGAGAATCCAAATTGG ACATCTGATACAAGGGCAATACAAGCCTTCAAACAGTTTGGAACCAAGCTGCAAGAAATTGAAGGGAATATCAATGCGAG GAACAAGGATTCTTGTTTGCTAAACCGAACTGGGCCTATTGAGCTACCCTACAGTTTGCTCCTTCGTTCTAGTGAGGAAG GGTTGACATGTAGAGGAATTCCCAACAGTATCTCTATTTGA
Protein sequence (LotjaGi3g1v0420100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MFGIFDKSKKIKGTLVLMPKNVLDLNAIVSARRGGVLGLPRSALGLVIDVAGQVVDGATAILSRNIHVQLISATKTNASG VGLLGEETFLQKHIPSLPTLGARQEAYSVEFDYDANFGIPGAFYIKNYMQCEFFLVSLTLEDIPNHGTIRFDCNSWVYNF KLYNNRHRIFFTNDTYLPGQTPAGLVKYRKEELENLRGDGSGERKEHERIYDYDVYNDLGNPDGGAPRPTLGGSAELPYP RRVRTGRKSTRTNRAAEKPAVDIYVPRDENFGHLKSSDFLTYGIKSLSQSVLPLFKSVIFDLNFTPNEFDSFDEVRGLYE GGIKLPTNIISQISPLPVLKEIFRTDGENVLQFPPPHVIRVSKSAWMTDVEFGREMIAGVNPNVIRLLQEFPPKSTLDVN GFGDQNSTLTKEHLEINLGGLTVDEALGAKRLFILDYHDAFMPYLEKINKLPSSKAYATRTILFLKDDGALTPLAIELSL PHPNGVKYGAESKVVLPAKEGAEGTIWLLAKAHVIVNDSGYHQLITHWLNTHATIEPFAIATNRHLSALHPINKLLYPHY RDTININALARASLINAEGIIEQSFLPGEYSLEISSVVYKNWVFPDQALPADLIKRGMAVEDPSAPHGVRLVLEDYPYAV DGLEIWDAIKKWVQDYVSLYYPSDDAVQKDTELQAWWKEVVQRAHADLSDKPWWPKMQTLEELIQSCSIIIWIASALHAA VNFGQYPYGGYILNRPTLSRRWIPENGTPEYDEMVKNPQKAYLRTITPKYQTLVDLSVIEILSRHASDEIYLGERENPNW TSDTRAIQAFKQFGTKLQEIEGNINARNKDSCLLNRTGPIELPYSLLLRSSEEGLTCRGIPNSISI
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 1 | 176 | 176 | 1.8E-62 | – | |
| PANTHER | 1 | 866 | 866 | 0.0 | – | |
| PANTHER | 1 | 866 | 866 | 0.0 | ||
| SUPERFAMILY | 9 | 176 | 168 | 1.94E-48 | ||
| SMART | 9 | 173 | 165 | 4.2E-54 | ||
| ProSiteProfiles | 46 | 171 | 126 | 15.794 | ||
| Pfam | 72 | 171 | 100 | 1.2E-11 | ||
| PRINTS | 141 | 159 | 19 | 6.8E-90 | ||
| PRINTS | 168 | 189 | 22 | 6.8E-90 | ||
| ProSiteProfiles | 175 | 866 | 692 | 309.082 | ||
| Gene3D | 177 | 274 | 98 | 1.5E-40 | – | |
| SUPERFAMILY | 177 | 866 | 690 | 8.63E-276 | ||
| Pfam | 184 | 848 | 665 | 1.8E-303 | ||
| PRINTS | 207 | 223 | 17 | 6.8E-90 | ||
| PRINTS | 238 | 257 | 20 | 6.8E-90 | ||
| Gene3D | 275 | 363 | 89 | 5.7E-37 | ||
| PRINTS | 306 | 327 | 22 | 6.8E-90 | ||
| PRINTS | 351 | 367 | 17 | 6.8E-90 | ||
| Gene3D | 364 | 499 | 136 | 3.4E-57 | – | |
| PRINTS | 390 | 409 | 20 | 6.8E-90 | ||
| PRINTS | 457 | 481 | 25 | 6.8E-90 | ||
| Gene3D | 500 | 865 | 366 | 1.7E-168 | – | |
| PRINTS | 504 | 521 | 18 | 2.3E-23 | ||
| PRINTS | 522 | 539 | 18 | 2.3E-23 | ||
| ProSitePatterns | 522 | 536 | 15 | - | ||
| PRINTS | 542 | 562 | 21 | 2.3E-23 | ||
| ProSitePatterns | 549 | 559 | 11 | - | ||
| PRINTS | 779 | 793 | 15 | 6.8E-90 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Molecular function | Oxidoreductase activity | Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced. | ||
| Molecular function | Oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen | Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor. | ||
| Molecular function | Metal ion binding | Interacting selectively and non-covalently with any metal ion. | ||
| Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of LotjaGi3g1v0420100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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