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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0422800 |
| Transcript ID | LotjaGi3g1v0422800.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Disease resistance protein (TIR-NBS-LRR class), putative; TAIR: AT1G72890.1 Disease resistance protein (TIR-NBS class); Swiss-Prot: sp|Q40392|TMVRN_NICGU TMV resistance protein N; TrEMBL-Plants: tr|G7LI64|G7LI64_MEDTR Disease resistance protein (TIR-NBS-LRR class); Found in the gene: LotjaGi3g1v0422800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:83151722..83161894) extracted from Lotus japonicus Gifu genome v1.2.
CGACTTACGAGCTATCGATCTCATCTAATGATGAAACCTAGAATGAGTCAACGAGATTAAGCAACAAAATCATCTACACC AAAATATTTTACAAACAAAATTGTCCTTTATATACAGCCATACTTCATGCGTTCCAGTCATTGTGCGTATGAAGGTATTA ATTAAAGAAAGCCCTGTTATTTTTTTGTTTCATCCTTTCTTTGCATCAGTTTACACGGACAATGGCTATGTCTTCTTCTT CTTCCCGTGTCTTTCTGAAAAAATACGATGTTTTTATTAGTTTTAGGGGTGAAGACACCAGAAATAACTTCACCCATGAT CTGTATTCTGCTCTGAGAAAGGAGAATATCATAGCCTACATAGATAATCAGCTAGAAAGAGGAGATGATATTTGGCCAGC ACTTGTCAAAGCAATCAAGGACTCCGTGATAGCTGTTGTGGTGTTCTCAGAAAGATACGCTACTTCAAGGTGGTGTCTGC AAGAACTCGCCCAAATAATGGAATGCAGAAGACTAGGGGGTCTGGCTGTTATACCAGTGTTCTACAAAACAAATCCAACA GACGTAAGGAAGCAGACTGGGAGTTACCAGAAACCATTTGATGACCATGACAAAAGAGAAGAGCAAGACAAAGTGGAAAG TTGGAGAGATGCTCTTACTCAAGCAGCCAATATTTCTGGATGGGAATCAAGAACCCAAGGGTAAGTATTTTTTTTACATA TATATTTATCCCGATAGACTTCGATCACTAACTAATCAAGGTTGGCTTGATCCAAGTAGATAAGAGGGATATTTCCATGT TGTCAAAAGTAGAAAATTAAAAGGATTAGAATTAAACTATGCAACAAAGTTGACTTTGGTAATTACATCAAAGTTGAAAG TTTGATTTTAGATCTGGATTTCATGGAGGCAATCTCCATCGGCCGTCCCCACCCCAAGGGTACAAACAAATTAAAAAAAA AAACAACTTTGCTGACAATAATTATTTGTTTGGTCAGAAGAGTCCTCCAAATATTCTGATGTTGTCTTGATTATTATTTT CGATATTTTTTTTTGAAATAGAGGATTGGCTCATTACATAAAAAAGTCCTTCTGTGTCACAAGGATTGTTGTTTTAGCCC CTCTTTATATTTTTTAAAAATGTTTGTTGTTTATAAAATTAATTTTTTCTCTTTTTTTTCATATATATCTTAATTTTTTC GAACTCTAGACTGTTTTGTCTTAAAAATTATGATACCAGGATAAATAATTAATTATCTCAAAAGTGTAAGTTGTTGGATA AGAGTCATAAAAATAGTTTTATATTATTGTTTGAACCCAAAATGGTGTGTGTTCAAATTAAAATTTTCACTTGTGATGTT TGATGGGGTTGTTCAAGGGGGGAGTTTCATAGGGTGGTGGCTTTGGGATTCTTTTTCTCCTGGTATGCCTTGGTGATGTG CTGTGGCTGTAGGTAGTGGGGTGGGAGAAGAGGATCGAGTTTCGGTGGGTGTAAGCTCTTTGTTTAATTTGGTCCTGTTC GGAAAAATTGTTAGAAGTCTCACATTGTCCAGAGATGTGGTCAACCAAGTGTTTATAAAGGGTAGAGCAACCCTCAACTC TTGAGCTAGCTTTTGGGTTGAGTTAGGTCTCCCTAATTCTAATATGGTATTAGAGCCTATCCTAGATACATTTGTTGTGT GGAGACCTCCCGTATTTGGGTCACCCTTTGATGTTAGTTCACGCTCCAGATGTCTAACCCTGGACGTGAGAGGGTATGTT AGAAGTCCCACATTGGTTAGAGATGTGGCCAACCAAGTGCTTATAAAGGGTAGAACAACCCTCAACTCTTGAGCTAGCTT TTGGGTTGAGTTAGGCCTCCCTAATTCTAATAAAAATAGTTTTGTGGAATGCTTTAGTTTTTGGGTACTGGTCGAAGATG ATTGGGGTTTGAGGTCTGATATATATGGTGTGTTGGGGTAGCTCTTTGATGTTGGTGGAGGAGTTTGTTATGCTCTGTTG TGGTGTTTGGAGGTTGTTGGAGGAGAGTTTTCTATGCATTTTATTTGCAGCTATATGGTGATATGGTGTAGCATGATAAA GCTCGGTGGGTTTTGGTGGTTATGATTGGATTGAAGGTAGGGGTGGAATGAGAATTTTGAGGTGAAATGTTTTTATGGTT AATTGTTTGAATATGTTAAATGAGGATGAAATGGAATGAAAGATGATGCAATTCATTCTATCTCATTCCATTTCTCATTA TCAACTTTTTGAAACCTCCAATTTGGATTGAATGAGATGGAATAAAGACACTCATAATAATTAAAATCATAAAATTATTT TCTTACCTCTACTGATTATCTATTCAATGTTAGTGATTTAAAAGTAAGGGTGATATAGGAATAAAAAAATCATAATTCAT ACTATTTTGTTGATTACTCAAATAACTGACCAAAAAATTTGTTTCGGTCCATTGTAAAATATCAAACAATAAAAGAAAGA TTTTTATTTTGATCCATCTCATTCTATTTCATTATGTTGAAAAGTCTCATATTGAATAAAAATATATCCAAGATAATACT TATATATAAGAAAACAATCATCAACTCTTAAGTTAGTTTTTAAGTTAAGTTAGGTCTCCCAATATTTATTCTTATCCATC TCATTTCATTTTGTTGCACTATATTTTCTATGGGTTAAGGCTGATATTTCAGTTTCTGTAATTCTGTATGTGGGTATTGG TTTTTAGATCCCTTGCTCTCTTGAGAGTTTTGAACTGGTATTGTATTGGTAGGTGTTTTAATTTCAACTAGATTGGTGGG AATTATGACTATCTAAATTATATTTAAGAGATGATGTTCTCATAAACTTTTGGGGTGAGTAGTCTCTTTAGCCTTATTAA TTCCTTTATTTGGCAGGGACAACTCTCAAGTCATAGAAAACCTTGTTAAGAATGTTTGGGGAAAGCTGCGCTCAATGGAA AATGATTATCAAGAAGGCCTTGTTTTAATTGACGAACAGTGTGAAGCCATTGAAGGTTCCTCAGGAAAACTTGGAAGAAT TGGACTTTGGGGCATGGGGGGAACAGGTAAGACCACCATTGCTAAAGCCTTGTTTGCCAACCACTCCCCCGAATATGACA GCGTATGCTTCTTGAAGGACATAAGAGAAGAATCACAAATTCACGGACTAGCACATATTCGTGATAAGCTTCTCTTTGAT CTGCTAAAGGACTAAAAGGAGCAAGTTACAACATCCAACTTTTCTGAATCCTCACTCAGAAGGAGAAAAGTTCTGATTGT GCTTGATGATGTGGATAGTTCTAAGCAATTAGAGTCTTTGTGTGTTGGACTGGGTGAGTTGGGAGAAGGCAGCAGTCTCA TTGTAACAACAAGAGATAAACATTTGCTTCATGGAATAGTTGATGAGATACATGAGCTCAAGCCTTGGAACTTTGAAAAA TCGTTTGTCCTCTTCAGCTTAGCAGCCTTCAAGAAAAGTGAGCCCGACGATGCTTATGAGGACCTCTCACGAAGGGCAGT TGAATATGCAGCATGCCTTCCTTTAGCTTTAAATTTTTTGGGTTCACATTTTTGGGTTCATTTAGTTACTGTACACAAAG AAATACTTGTGTAAAGTTAAACAAACCTAACTTGACCTATTATATCAGGTTACAACAAGTTAAATCATTTTTTTAAACAA AATTAGTATAGTAAAAAAAATCCCATTAATCTCTAACCTTTATTATCATCACCTACATCCTCTAACAATTTTAAATGTAT TCATCATCAACACTCATTTTTATTTGAAATAGAAATTGACGATGATAAACGAACGTACAAACAAGGAGGTGATTCCAATG AAAAATTGGAATTATTTAGCTTTTTTTTTGTGCCTTGGAAGCTTATCCTCGCAATGAATATCACTAGAAACCAAATCACT GGTTAAGGAAGTCACAGTCATAAGAAGAAAGAGTAAATCCAGCATCTCCGATGACACAACCACCGCGTAACCCAGTTACC GGTGAGTTTTCCGGCGACCACCAATCTCCATTTTTCTTCTATTTTCTATAACCTTACTACTTCCTTTAGCCATTTCAACT TCTAGATCGTACACGCAGGGAATGTCAGAGATAAAGTTTTCATTTTTAACAAAGAGCAAGAGGTTGCAGATGTAAATCTG TCTTCTTGAATTAGATAAAAGATGGTGGCCAGATCTGTGCAGTGGGGTGAGATTTGAAATGCAACAAATTAGTTGCATAT TCTAGGAATTGGATATATAGAAAGGATGAAGAAGATGACCTCGTGATAGTAAAATTGGCCACCGATAGGAGTGAAGGTGG AGAAGCAATAAATTAATTGTGATGAGAGTTTGGGAATGTTAATGAGATCTTGAAAATTAAATGTGATAATGAGATTTTAG TTGTCATATTATTGTGTTTGTGTTCCAGGTGGTGGTTGCAGTAGTGAGTTTGACGGTGATGGAGATTGGAGAGGATAGAG AGAGGAAGATGAAGGGCTTTACTGTAAAAGATCTTCAGATCTTCAGAATCCATATCACTGTCTGTCAGATCTTCTTCTTT TCTGGGTCTGAATGAGAAGATGAATTGGGTGATGGTGATGGAGGAGATCTGGAGAAAAAGACATAAACTTGATGGTGGTT GAGGTGGTGGTGCGGTGTTGGTGTGGTCTGGGTTTTTGGGTTCCAAAATCTGAAAAATGTTGACTTAGAAGATGAAGAAT GAAGATTTCTGGGTTAAGATGAAAGAAGAATATTAAGGATGTTTTTTTATAGGCATTAAGGATGGTGATGATAGATTAAG ACTTTTTTTCTTTAATCCCTTTTTAAATTAAAAAAGGCGACCTGTTTGTAAACTTGTGATAACAGGTCAAACTAGGTTTG TGTAACTTTGCACAAACATTTCTTTATGTATGGTAAATGAACCCCACATTTTTATTCCAAAAATATTAAATTCTGGCAAT CTGAATTGAGAAACTTGGAGCTCAGGAGAAAATCCTTCAAGGAAATTCAAGACGTGTTTAAAGTGAGTTATCATGGATTA TCAAGGCAAGAGCAGGCAATATTTCTGGACATTGCTATCTTTTTCAAAGACCGGAATCAAGATTCTGTCATAAGTATACT AGATGCCTGTGGTTTCAATGCTGCTAGTGGAATAGAAAAACTTAAAGATAAAGCTCTTATAACTATATCAAAGACCAATA CTATACAAATGCTTGACTTTCTACAAGACATGGCTTTTGATATAGTTAGAAATGATGTAACAGACCCTAGAAGAGGCACC ATATTGATGAATGATGATTGTCTTCAGCTCTGCAGCTCCGAGGTAACAGAAAGTTAAGCTTTTTTCTTACTTTCTTTTTG ATAGAAAAGTTGTGGTGAATTTGCAACCAAAATTTACTTATTTCTTGTCTTTCCATCCAGGGAACTCCACAAGTCGTTGA AGGAGCATTGTTAAATTTGTCTCGGAGTAGTCATAGATATAAATTCAATGATGAAATGTTCAGCTTACCTAAATTAAGAA TTCTTAAGTTTTATGTCGGCTCTGTCATGTCAACCCATATCTCTTTCAGCAAATCAGAAAACGAATATGACTCTTACAGG GACTATTACCATTATGACTATCAGCTACCTGGTTCTGCTGAATTGAAGTATTTTGAGTGGGCTGGATACCCTTCCAAGTC TCTTCCTATAACTTTTTGTGTCAAGTTTCTTGTTGAGTTTCGGATGCCGTACAGTCATGTTGAAGAACTTTGGGATGGGA CACAGGTAAAGACATACAATATATTTTCCTATAGCCCTGTACGTAGTGTAGTGTATGCTAACATTTTTTATACTGAAGCA TGAAATGACATTATTTATTCCTTTTGAATTTTTCCAGAACCTTGTGAATTTGGAGACAATTGACCTTAGTGAATGCAAAA AGTTAAGGAAGCTCCCTGACTTGTACAAAGCCTCAAAACTCAAATGGGTAAATCTCACGGGATGTGAAAGTTTGCAGGTC CTTCATCCATCGCTTTTATCTGTGGACACACTAGTTACTTTGACACTGGATAGATGCAAAAAACTAGAGAGTGTTATGAG TGAACAACATTTGAGCAAGCTGCAGAACCTCAACTTGAATGACTGTCAAAATCTCAAGGAATTTTCAGTGTCGTCAGATT CAATTAAGTTGTTGGATTTAAGCAAGACAAGAGTCAGACAATTGTATCCATCAATCGGTCGACTTAGCGATCTTTTATGG CTTAGTCTAGAAGATTTGGATTTGGAGAATCTTCCTGATGAGTTATCATGCCTGACATCTCTTGAGGAGCTAAGGATTTC TGACTGTGGAGTAATTGATAAAGAGAAGCTACATGTCATATTTGCTGGCTTAGGATCCTTAAAAGTGCTACATCTAAAGG ATTGTTATCGTAAGTTTGAACTCCCAGACAACATCAGTGCCTTGTCATCATTACAAGAATTAAGGCTGGATGGAAGCTGA AGAAGTTGCCTACAAGCATCAAGCTTCTTGAAAATCTCGAGATTCTCTCGTTAGCGAGATGTAGGGAGCTTGAGTCTCTA CCTGAGCTTCCGTTGTTGATCAAGGAGCTTAACGCCGACGATTGTACATCATTAGAGACAGTATGCACTTTAAAGACTTT TTCAGTGAAGATGAAAGGAATAGAGAAACACATATCATTCATGAATTCAATTGGACTGAGTATATCTTCAATCCACCAGA TTATGGAGGATGCCATGTTTACAATGAAGAGGGCTGAATTGTGCAATGTATTTGTAAGAAGCAGTTTTGCGGTTTGCTTT CCAGGAGGCGGTGTTCCCTCAGTGCCAGAGTCATCATTCATCACATATCAAAGCACAGGGTCATCAATTACCATTAATGA ACCTCATGACCAAAGTTTGTCGCACCGCTGTCTGGGCACCATTTATTGTGTGCTTCTTTTTTCATCCTCTGGAAGTACAG TCTGGGATACTAAAATCCAATGCCAAATCTACGGGAAAGATGGAGAATGCAAGATGACTACATGGTTTCCCGAATACATC GGGCTACCTAGAGTTGAGCATGTTTTTCTATGGCATGGTCCTAGTGTTGATGATGCACAAGTTTTTGAGTTCCTTGTTAC ACCTGATACTGGGCTCAGAATAGAAGAGTGTGGGATTTACCATATGTGTTACTTGAATTCTGAGCTTGAGAGACTTATAG GGGAAGCAGAAATGGAACCGGAATTCAAGTCAGAGTTGGGAGACGGAGTGGATGCAATCGCCGCTGGACTTGCGAGAGAA CTATAATCACTAATTTGTCCTAGAGCAATGGGGGAATCTTCAGGTATGGAACTAACTAGCTACTCTCTATCCTCGTATAA TTTGTCTTCTGCGTTGCATGAATTCTTTTTAAAGGAAAGGAAAAGAATTCATCCAACGTTTACTATATAGAATCCATTAA GACTCATTGACACCTAAATTCAAACTTAGCATTAGAGAGATAAAGAAATAAAACGAGTAGTTATGATTCATTCGTACCCT CATTTCATTTTTATCTCAAAGTATGAATGAGATTATATGAGTAGCGTGTGATATGAAAAAAAAGAGAAAAAAAAAGTGGA AATGAGATAGAAAAGAAAGCAAGTGTGACATGTTCACATTTTGGGTGTATACCACTAGAGAAAGATAAGAAATGAGAATA AGTAATAGATGTCATATATAACATGATGCGACTAGAAATAAAAAAATGTTTTGTTCATACTTGATTTTGAGGTGGAAAAG GTGGAGAGATGAGAGTTATAGAAAAAAAAAAATATAAGATTTGATATGTAATGTGATAGGAAATGAGGAGAGATAGAAAT AAAATTAGATGAAAATGAAGTAGAAAGTATTTCGAGTGTGACTAAATCAAGGTTGATATATACACTATAGAATAGAAAAG CATTTAGATGATGTTTGATTGCCCTTTTTGAAAATTGTATTTAAAAACTGTCTTTAGAAACTATTTTTGAAACTATTTTA AAAAATTGTTTGAATGGGATGTTTTTTAACACTAAAATGTTTTTTAGCATTAAAAAACTGTAATTTGAAAACAAAAATAT CTTTTAACTGTTTTGGTATTTTAGTTCTTAAAGCTGAAAATTAGAACTGTTTTTAAAAACTATTTTTGAAAATATGTTGT AACAAACCTTCAAAAACTGTAATCAAACATGTCATTATACTATACCTGAAAAGAAGAAACACACTACTAAGAAACAACAC ACTCAATATTTTTTTTATAGAAACGTAGTTTAAAATTTAGGGGCAGCAAATAGTCTTGATTTATAGACCACTGAACAATA TTAACAACCACCAATCACATTGTATATCACATCTGTCGACACCATTTAGGTTTTCACAAAAACAATTCTGATAGGAAAAT GTGTCTTGACTTGTATTCTTTGGGGAGTTGAGTTGGGTATTTTCATATAAGAACCTACTTTTAATCAAAACTTTCAACTC ATTTAATTGATGGGCCAAAGTAGACCGAAGTGAGCCAACCCACCGGATCGAACAATAAATTATTTAAAATTATATTTTTA TTAATATTGTAAATATTGTAAGGAAAATGCCACACTCAAGATGAGAAAAATAAGAGAAAATAGAAGTATGATAAAAGTGA GAGATATGAAAAAATAGCATGTATTATATGTATTGTTTGGGGGCTTATCCATCATAACTCTTTTAAAACAAATGTAATAT GCATGACTGAAGTTAGACTTAGGAATTCAATTTTTCAAACTTTCACATTCATCCACAAAAGACTTCCTTGCTTTGATATG TGCTCGGAATTGGTAGAATGTTTAGATTGTGAAAGTAATTTATTCCTTCTAAGTGTAATTATTTGTTACTTTATTATTTG TATATGGCTTGCGGCTAGCTTGGGATAGAGGTTGTCGGAAAGTGGCGTGTGAAGTGGATTCCATGGAGCTGTTGCAGCTG CTTCAGAGGCGTGAGAATGGGAATGTCTTTCTTATTGCTATGGAGATTTGGAGCTATGTAGACCGGGAGGGGGAGCTGTC CTTGTGTCGTATCTCGCGGGAGTGCAATTCAGTGGCGGATCACATTGCGAGGTAATGTGCCAAACTGCAAGTGTACAGTT TTGTCCGGGGTTTTAATTATCGAACACAAGAATTGTGTGTGTTTACTTCTAAATTTATCAATTTAGTTGTAAGGACGAAA AAACAAAGATAAAAATAGAGAATTGATTGATTGTGATTATTGCGAAAAGAAATCAAGAAAAACAAAGAAATGGTTGTCAA TTTGTAAACTTATGGGAAAAAAGCTGCACTAGGGAATTGAATCTGTTACCCTCGTTATGCATGTACCCGCTCCAGGTACA TATGAATTCGACTAAACCCGTTCAAGGCGTTATGTCTATGTGATTACTTACTATTTCCTTAGTCAAGTTCTCCTTCTAGT TAATTAGTGATAGCTAATCCCTTAGTACCTAAATAACTGAAGTAAATCCTAATAAAATATAAATCAAAATCAAAAAAATT ATAGAAAATACTAAAAACACATAAAAATAATAAAATGCATAGAATAATCTTAAAGTAACCTAAAATGACTAAAATATCCT AAATAATATATCAAAATGCATGAAAATTATATAGAAAAGTAGCATTTAATCCCGGGTCATCACGAGGGTTGTTGCTAGAA CCTTGAATAAGGAGTTTTGGGTAATTGATGTTCCTTCCTTTGAGTTGGAAACCCATTTGCTTCGTGATGCTCTTTCTATA GTGTAGTGTTCTTGTTTTGTTAGTTTTCCAATGGAGAAAAAAAAAGAATTTTATTATTTTGTTCCTCAATTGTAATATGT AGATGATAATGATGATTCAAATCAAAAAGATGATGGTGGTGGTGAGCGGCAAGTGGATGTATCTTTTTCTAAGATAACAT TTATCATTTTGAATTTAGAAGATGATGATTGAATCACTAGAGAGATTTGGTTCAATTATCTTTGATGTATAAGAATATGT CATTTGTATTTTACTTAATTGTATTGTGGTTTAAGATAATTAAACAAAAACAAATTTGTGGTTTTGTTGTTAAAGACATA TAAGTCATGTGGTGTTATTTGTGTAAAATTGTGATTGTGTAACTTGTACTATTGTGAGATTGTTGTTTTATAGAGTGTGG ATATAATTGACTA
CDS sequence (LotjaGi3g1v0422800.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTATGTCTTCTTCTTCTTCCCGTGTCTTTCTGAAAAAATACGATGTTTTTATTAGTTTTAGGGGTGAAGACACCAG AAATAACTTCACCCATGATCTGTATTCTGCTCTGAGAAAGGAGAATATCATAGCCTACATAGATAATCAGCTAGAAAGAG GAGATGATATTTGGCCAGCACTTGTCAAAGCAATCAAGGACTCCGTGATAGCTGTTGTGGTGTTCTCAGAAAGATACGCT ACTTCAAGGTGGTGTCTGCAAGAACTCGCCCAAATAATGGAATGCAGAAGACTAGGGGGTCTGGCTGTTATACCAGTGTT CTACAAAACAAATCCAACAGACGTAAGGAAGCAGACTGGGAGTTACCAGAAACCATTTGATGACCATGACAAAAGAGAAG AGCAAGACAAAGTGGAAAGTTGGAGAGATGCTCTTACTCAAGCAGCCAATATTTCTGGATGGGAATCAAGAACCCAAGGG GACAACTCTCAAGTCATAGAAAACCTTGTTAAGAATGTTTGGGGAAAGCTGCGCTCAATGGAAAATGATTATCAAGAAGG CCTTGTTTTAATTGACGAACAGTGTGAAGCCATTGAAGGTTCCTCAGGAAAACTTGGAAGAATTGGACTTTGGGGCATGG GGGGAACAGGTAAGACCACCATTGCTAAAGCCTTGTTTGCCAACCACTCCCCCGAATATGACAGCGTATGCTTCTTGAAG GACATAAGAGAAGAATCACAAATTCACGGACTAGCACATATTCGTGATAAGCTTCTCTTTGATCTGCTAAAGGACTAA
Protein sequence (LotjaGi3g1v0422800.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAMSSSSSRVFLKKYDVFISFRGEDTRNNFTHDLYSALRKENIIAYIDNQLERGDDIWPALVKAIKDSVIAVVVFSERYA TSRWCLQELAQIMECRRLGGLAVIPVFYKTNPTDVRKQTGSYQKPFDDHDKREEQDKVESWRDALTQAANISGWESRTQG DNSQVIENLVKNVWGKLRSMENDYQEGLVLIDEQCEAIEGSSGKLGRIGLWGMGGTGKTTIAKALFANHSPEYDSVCFLK DIREESQIHGLAHIRDKLLFDLLKD
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 4 | 264 | 261 | 1.7E-85 | – | |
| PANTHER | 4 | 264 | 261 | 1.7E-85 | – | |
| SUPERFAMILY | 5 | 154 | 150 | 1.05E-40 | ||
| Gene3D | 12 | 185 | 174 | 2.6E-68 | ||
| ProSiteProfiles | 13 | 151 | 139 | 27.853 | ||
| SMART | 14 | 151 | 138 | 5.2E-45 | ||
| Pfam | 14 | 183 | 170 | 1.2E-46 | ||
| Gene3D | 186 | 265 | 80 | 2.0E-9 | – | |
| SUPERFAMILY | 190 | 264 | 75 | 2.12E-11 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Biological process | Signal transduction | The cellular process in which a signal is conveyed to trigger a change in the activity or state of a cell. Signal transduction begins with reception of a signal (e.g. a ligand binding to a receptor or receptor activation by a stimulus such as light), or for signal transduction in the absence of ligand, signal-withdrawal or the activity of a constitutively active receptor. Signal transduction ends with regulation of a downstream cellular process, e.g. regulation of transcription or regulation of a metabolic process. Signal transduction covers signaling from receptors located on the surface of the cell and signaling via molecules located within the cell. For signaling between cells, signal transduction is restricted to events at and within the receiving cell. |
Expression pattern of LotjaGi3g1v0422800.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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