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Field | Value |
---|---|
Gene ID | LotjaGi3g1v0426300 |
Transcript ID | LotjaGi3g1v0426300.4 |
Related isoforms 4 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | Receptor-like kinase; TAIR: AT3G13690.1 kinase with adenine nucleotide alpha hydrolases-like domain-containing protein; Swiss-Prot: sp|Q9CAL8|PEK13_ARATH Proline-rich receptor-like protein kinase PERK13; TrEMBL-Plants: tr|A0A0L9TJA9|A0A0L9TJA9_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0426300 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:83622605..83624915) extracted from Lotus japonicus Gifu genome v1.2.
TGGTTCAGCTATGCTGAGTTAGAACTTGCCACTGGTGGATTTTCACAAGCCAACTTCTTGGCAGAAGGAGGGTTTGGATC TGTTCACAGAGGGGTTCTACCTGAAGGACAGGTCATTGCTGTTAAACAACACAAATTGGCTAGTTCTCAAGGTGATATTG AGTTTTGCTCTGAGGTAGAAGTCTTGAGCTGTGCTCAACACCGGAATGTTGTTATGCTGATTGGGTTCTGTATAGAGGAT AAAAGAAGGCTTCTAGTTTACGAGTACATTTGCAATGGGTCATTGGATGTACATTTATATGGTGATTTCTCTTGCCCCAT ACCAAACTATCTCATGATAGAAGTATATTTTGGAATTCACTTGAGCTTAATTAAGACATTCAGCATGTAATATTGACAAA CAGCCAAGTTCTTACATGTTTTTCATATTTCTTAGTGTCATCAAACAATTGGAAAATGGGATTAGATAATTTACAATAAT TTTGTAAAATAGGACCTAGTTTTATTTGTTCTTTGGTGGTATTTGCTTTATGAACCCATATGCTAACTAACATGATATTT TTTGACTTAAAGGTTACATTCATGCAGGCTAGAGTTTGGTAATATCATGCATGATATATTCATCATGTTTCATTGAGTTA TTGAAATATGGTATAGGGTGCATTACACTAATACTGACTTGATTTTCAGTTGATCTAATACTTCAAATTGTTTCAGGGAG ACAAAGGGATCCACTAGAATGGTCTGCTCGGCAAAAAATTGCTGTTGGAGCTGCTCGTGGTTTAAGGTATCTTCATGAAG AGTGCAGAGTGGGTTGCATTATCCACCGTGACATGAGACCAAACAACATTCTCATAACTCATGATTTTGAACCTCTGGTA GGGTAGTTCTTTGCCTCCCTTGTCAATGCATTGCAGTCCCATATAGTTTACACTTTACATGATTAAAGGCACCATTACTT CATTGTTGCAGATTCATCTGTCTATATTTCTGTTTGCACTCTAGATATTGTATTGAAATGCCTCAGATGTGTGCTTGATT TTCTAACAGTATTGTATTGTGTTGAATTATGCAAGGTTGGTGACTTTGGACTGGCTAGGTGGCAGCCTGATGGAGATACA GGTGTGGAAACTAGAGTGATTGGAACATTCGGGTACGTGTTGTATTGATTGTGAATTTCTTTCGTCGTTAAACTTGTCTG TGCAATGTTGGATGCAGCTAAGTTATGCTGTTATCATAATATCATGTAGGTATTTGGCTCCTGAATATGCTCAAAGTGGC CAAATCACTGAAAAAGCTGATGTATATTCCTTTGGGGTGGTATTAGTCGAACTTGTTACAGGGAGAAAAGCTGTGGATCT CACTCGGCCCAAGGGACAGCAGTGCCTTACTGAGTGGGTAAGTTCAGATTGTGGTAGTATATAACATTTGATATTTTATT GTCTGATGTTAGCATTATTTCAGGAGTCAATTAGCATTCATGATAACTTTTTTTGTCCATCAATGACTAATTGTGAAAAC ACTTGGAAATTATACAGGCACGACCGCTCTTGGAAGAATATGCCATTGATGAACTGATTGATCCGAGGCTAGGTAGTCAC TATGCAGAGCAAGAAGTATATTGCATGCTGCATGCTGCAGCATTATGCATACGGCGAGATCCTCATTCCAGACCACGCAT GTCACAGGTAAAAAAATTGTTTTCTACACATTTTATTTTTTTTCTGGTAAACTTTGCTTCCTTTAAAGAATCAACAACTA ACATATTTCTAACATCTTGATCCAAAAGTTATAGAAAAAATCCTACATAAGTCAATGGGAAAAGGTTAACAGCACATCTT TTTCAGAAGGATCAGAAGCGGTCCACTTTCACTTTAATAATGCATGAAATTTAAAAAATTTGTTGCATTACCATTAAATG CTAATTGGAAAACACTTTTTAGTGACAATAATTCTTCTAATATGTCGATTGCTGGATACTAGAAGTTTAGTTGTTTGGAC ATGTTTGTGTATTTGCACGTTGCCCCAGCTTTTGGTTAACCCGCGGCTAACCGCTTTGGCATACTTGTGGCTGTTTATTA GGTTCTCCGAATACTAGAGGGAGACATGGTCATGGACACAAATTACATATCAACTCCAGGTTATGATGTGGGAAACAGGA GTGGTCGAATTTGGTCAGAGCCTCTACAGAGGCAGCACCCTTACAGTGGTCCCCTCTTAGAAGAATCATTCAGTGGGAAG CTATCTCTTGACAAATACAAACCTGCCTACTGGGATAGGGATAGGCACTAGCCTTCATGTGAAGATGATGA
CDS sequence (LotjaGi3g1v0426300.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCTGATTGGGTTCTGTATAGAGGATAAAAGAAGGCTTCTAGTTTACGAGTACATTTGCAATGGGTCATTGGATGTACA TTTATATGGGAGACAAAGGGATCCACTAGAATGGTCTGCTCGGCAAAAAATTGCTGTTGGAGCTGCTCGTGGTTTAAGGT ATCTTCATGAAGAGTGCAGAGTGGGTTGCATTATCCACCGTGACATGAGACCAAACAACATTCTCATAACTCATGATTTT GAACCTCTGTATTGTATTGTGTTGAATTATGCAAGGTTGGTGACTTTGGACTGGCTAGGTGGCAGCCTGATGGAGATACA GGTGTGGAAACTAGAGTATTTGGCTCCTGAATATGCTCAAAGTGGCCAAATCACTGAAAAAGCTGATGTATATTCCTTTG GGGTGGTATTAGTCGAACTTGTTACAGGGAGAAAAGCTGTGGATCTCACTCGGCCCAAGGGACAGCAGTGCCTTACTGAG TGGGCACGACCGCTCTTGGAAGAATATGCCATTGATGAACTGATTGATCCGAGGCTAGGTAGTCACTATGCAGAGCAAGA AGTATATTGCATGCTGCATGCTGCAGCATTATGCATACGGCGAGATCCTCATTCCAGACCACGCATGTCACAGGTTCTCC GAATACTAGAGGGAGACATGGTCATGGACACAAATTACATATCAACTCCAGGTTATGATGTGGGAAACAGGAGTGGTCGA ATTTGGTCAGAGCCTCTACAGAGGCAGCACCCTTACAGTGGTCCCCTCTTAGAAGAATCATTCAGTGGGAAGCTATCTCT TGACAAATACAAACCTGCCTACTGGGATAGGGATAGGCACTAG
Protein sequence (LotjaGi3g1v0426300.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLIGFCIEDKRRLLVYEYICNGSLDVHLYGRQRDPLEWSARQKIAVGAARGLRYLHEECRVGCIIHRDMRPNNILITHDF EPLYCIVLNYARLVTLDWLGGSLMEIQVWKLEYLAPEYAQSGQITEKADVYSFGVVLVELVTGRKAVDLTRPKGQQCLTE WARPLLEEYAIDELIDPRLGSHYAEQEVYCMLHAAALCIRRDPHSRPRMSQVLRILEGDMVMDTNYISTPGYDVGNRSGR IWSEPLQRQHPYSGPLLEESFSGKLSLDKYKPAYWDRDRH
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
PANTHER | 1 | 232 | 232 | 2.9E-117 | – | |
PANTHER | 1 | 232 | 232 | 2.9E-117 | – | |
ProSiteProfiles | 1 | 222 | 222 | 21.432 | ||
Pfam | 2 | 215 | 214 | 9.0E-23 | ||
SUPERFAMILY | 2 | 226 | 225 | 1.89E-45 | ||
Gene3D | 19 | 228 | 210 | 1.8E-46 | – | |
ProSitePatterns | 64 | 76 | 13 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi3g1v0426300.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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