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Field | Value |
---|---|
Gene ID | LotjaGi3g1v0426600 |
Transcript ID | LotjaGi3g1v0426600.1 |
Lotus japonicus genome version | Gifu v1.2 |
Description | Inorganic pyrophosphatase 2; TAIR: AT1G17710.1 Pyridoxal phosphate phosphatase-related protein; Swiss-Prot: sp|Q9FZ62|PPSP2_ARATH Inorganic pyrophosphatase 2; TrEMBL-Plants: tr|I3S8Y2|I3S8Y2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0426600 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:83674454..83676490) extracted from Lotus japonicus Gifu genome v1.2.
CACCTTTAGAACAAAGAGCTTTGGATTTTGCCGCACTGACAATAAGGCCAGAAGCTGAACCAAAATCAGCCAAGATACTA GCAACCACCTCCACTTGGGACGATTTCGCCTTGCAAAAGAGGAGGACATCATCTGCAAAAAGAATATGAGAAAGAGGAGG GCCCCCTCTAGACATAGTAATCGGATGCCAAAGCCCCGCACTCACAGCATTCTGAATACGCACAGAAAGCTTCTCCATAC ACATAACAAAGAGGTAGAGAATTTAATTGCACGATTTCCATAACAGATCATTTTGTCCGAATGCAGCACAATTCCGAGAA TATTCTTTTGGGCTGCTTCCGGTGGTTGAGGATCCACAAAACAAGTGCATTTCACACTCACAATGGCATTCAATTCTTTC TCTTCTCAAAAGGTGGCTCAAACCTTTCACACCCTTCGATCCTCGTACCAACTTAAATTTCACCATATCCAACGGCTGAG ATAGAATTTGAAATGCCATATGCATAAAAGTTTTGATAAGTTATTCTACAGAATAAAATCATTAAAAAAACTTGTTCATG CTAAGTATGTAACGTAATGTAATATTCCTTTGGAATCAAATATTCTCTCTTGTTTTTTTGGGTTCTGGCTTCACCCAATG TTAACTATAAATACCCGTTTTTCCATTTGGTGAAAAATCCAAGCCAACAAACGATTTTGAGAGCATTGCAAGATACCCAA ATAGAGCCTAATTCTTGTGAAGGAGATTTGCCACCCAACAAATGTCTGGAGTTGTGGTTGTTTTCGACTTTGACAAGACC ATTGTTGATTGCGATAGTGATAACTGGGTCGTCGACGAGTTGGGTTTCACTGATTTGTTTAATCAACTCCATCCCACCAT GCCTTGGAACTCCCTCATGGTAAGCTTTTGATTTTCTTCTAATTTGTTTTTCTGATTCTTGGGATCATGTGCTCTGTTTT TATTGATACTCTGTTGTTTTATTGATTAATTTGGTTTTGGATTTACAGGACAGGATGATGATGGAGCTTCATTCAAAAGG TGTAACTATTAAGGAGATTGAAGAGGTTCTACATAGGATTCCTATTCACCCCAGAGTGATACCTGCTATTAAAGCAGCTC ATGCTTTAGGGTATGTATCAATTTCCCCTTAAACTAAGTTTTGTTTTGATTTCATTCTTTGATTTTAAGTGGATATGAAG TTGATGGTTGCATTTGTTTTTTCAGGTGTGATTTAAGGATTGTGAGTGATGCAAACATGTTTTTCATTGAGACAATTCTG GAGCATTTGGGAATAAGGGAATACTTCTCAGAGATTAACACTAATCCAGGTTATGTTAATAAAGAAGGAAGGTTAAGAAT TTTTCCTTACCATGATTTCAACAAGGCCCCCCATGGCTGCAGCTTGTGCCCACCAAACATGTGTAAGGTATAAATCTTCC TTTGAATTGAATATTTTTAAACCTTTTTTTTAATTTGTGGCCTAATATAATTCTAAACTAATTAATTATTATTAAATACA TTTCAGGGTTTAATCATAGACAGAATACAAGGTTTATTTTCTCAAGAGGATGACAAGAGAATCATCTATCTTGGTGATGG GAGTGGTGACTATTGCCCAAGCTTAAGGCTTAAACAGAGAGATTTCATGATGCCAAGGAAGAATTTTCCTGTGTGGGATT TGATATGCAAAGACCCTTTGCTTCTGAAAGCTGAAATCCATGGTTGGACTAATGGAGAAGAGTTGGAGCATGTTCTCTTG CATTTAATCAACATGATTTCTTTGGACAAAGGCACTCAGTTTATATCATCTGACTGCAAAACACAGACTCTTTGTATATC TGCTCATGAGCCTTTGCCTAAAGTTCTTCATGTTCGACCATAATTTCTTACTTTAGGATCGCTCTTAATGTATTATAGCT ATAGTTTTTTTAAATTAACCTACATGAACACCACCTAATGTCACTAATCTTGGAATTGGTCCAAGAAGGAAACGTAGAAT TTCTATCTAATGCAATTATGAGTTTGCTCTATAGTTT
CDS sequence (LotjaGi3g1v0426600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCTGGAGTTGTGGTTGTTTTCGACTTTGACAAGACCATTGTTGATTGCGATAGTGATAACTGGGTCGTCGACGAGTT GGGTTTCACTGATTTGTTTAATCAACTCCATCCCACCATGCCTTGGAACTCCCTCATGGACAGGATGATGATGGAGCTTC ATTCAAAAGGTGTAACTATTAAGGAGATTGAAGAGGTTCTACATAGGATTCCTATTCACCCCAGAGTGATACCTGCTATT AAAGCAGCTCATGCTTTAGGGTGTGATTTAAGGATTGTGAGTGATGCAAACATGTTTTTCATTGAGACAATTCTGGAGCA TTTGGGAATAAGGGAATACTTCTCAGAGATTAACACTAATCCAGGTTATGTTAATAAAGAAGGAAGGTTAAGAATTTTTC CTTACCATGATTTCAACAAGGCCCCCCATGGCTGCAGCTTGTGCCCACCAAACATGTGTAAGGGTTTAATCATAGACAGA ATACAAGGTTTATTTTCTCAAGAGGATGACAAGAGAATCATCTATCTTGGTGATGGGAGTGGTGACTATTGCCCAAGCTT AAGGCTTAAACAGAGAGATTTCATGATGCCAAGGAAGAATTTTCCTGTGTGGGATTTGATATGCAAAGACCCTTTGCTTC TGAAAGCTGAAATCCATGGTTGGACTAATGGAGAAGAGTTGGAGCATGTTCTCTTGCATTTAATCAACATGATTTCTTTG GACAAAGGCACTCAGTTTATATCATCTGACTGCAAAACACAGACTCTTTGTATATCTGCTCATGAGCCTTTGCCTAAAGT TCTTCATGTTCGACCATAA
Protein sequence (LotjaGi3g1v0426600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSGVVVVFDFDKTIVDCDSDNWVVDELGFTDLFNQLHPTMPWNSLMDRMMMELHSKGVTIKEIEEVLHRIPIHPRVIPAI KAAHALGCDLRIVSDANMFFIETILEHLGIREYFSEINTNPGYVNKEGRLRIFPYHDFNKAPHGCSLCPPNMCKGLIIDR IQGLFSQEDDKRIIYLGDGSGDYCPSLRLKQRDFMMPRKNFPVWDLICKDPLLLKAEIHGWTNGEELEHVLLHLINMISL DKGTQFISSDCKTQTLCISAHEPLPKVLHVRP
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
PANTHER | 1 | 270 | 270 | 1.7E-153 | – | |
PANTHER | 1 | 270 | 270 | 1.7E-153 | ||
PIRSF | 1 | 239 | 239 | 1.7E-94 | ||
Gene3D | 3 | 188 | 186 | 8.2E-25 | ||
TIGRFAM | 4 | 199 | 196 | 8.5E-58 | ||
TIGRFAM | 5 | 187 | 183 | 8.9E-32 | – | |
Pfam | 5 | 235 | 231 | 5.8E-97 | ||
SUPERFAMILY | 5 | 190 | 186 | 5.7E-27 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Phosphatase activity | Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate. |
Expression pattern of LotjaGi3g1v0426600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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