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Field | Value |
---|---|
Gene ID | LotjaGi3g1v0426700 |
Transcript ID | LotjaGi3g1v0426700.1 |
Lotus japonicus genome version | Gifu v1.2 |
Description | Inorganic pyrophosphatase 2; TAIR: AT1G17710.1 Pyridoxal phosphate phosphatase-related protein; Swiss-Prot: sp|Q9FZ62|PPSP2_ARATH Inorganic pyrophosphatase 2; TrEMBL-Plants: tr|I3S8Y2|I3S8Y2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0426700 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:83692142..83693870) extracted from Lotus japonicus Gifu genome v1.2.
CCTTCCACACCCTCCGATCCTCTTATCAACTTCAATTTCATCATATCCAACGGCTGAGATAAAACTTAAAATGCCAAAAA AAGCATAAGAGTTCTGATAAGTTTATTCTAAGAATAAAATCTAATAAAGGCAGTTTCATATTTTAATGGCCTCTTCTTTT ACGAGAAACTACTAGCCATATGCTATGTAACGCAACGTAATATTCCTTGGGAATCAAATATTCTCTCTTGGTTTTTTGGG TGCTGACTTCACCAATGTTCACTATAAATACCCTTTTCTCCATGGTTGAAAAATCCAAGCCTATAACCGATTTTGAGAGC ACTGCAAGATAGATTACTTCTTCTGTGTCATTGAAGTTTTTGCCATTCTCTTTTTCATCCCCAACAAAAATATGTCTGGA ATTGTGGTGGTTTTTGACTTTGACAAGACCATTGTCGATTGTGACAGTGATAACTGGGTTGTTGACGAGTTGGGTTTCAC CGATTTGTTTAATCAGCTCCTTCCCACCATGCCTTGGAACTCCCTTATGGTAAGCTTTTGATTTTCTTCTAATTTGTTAT TCTGATTTTTGGGATCATGTGCTTTGTTTTTATTGATACTGTTTTGTTGATAAATTTGGTTTTGAATTTACAGGACAGGA TGATGATGGAGCTTCATTCAAAGGGTGTAACTATTAAGGAGATTGAAGAGGTTCTGCATAGGATTCCTATTCACCCCAGA GTAATACCTGCTATTAAAGCAGCTCATGCTTTAGGGTATGTATTACTTTTCCCAACAAATTTCTTTTTTTATTTTAAGTG GAGATGAAATTAATGATGGCATTTGTTTTTCAGGTGCGATTTGAGGATTGTGAGTGATGCAAACGTGTTTTTCATTGAGA CAATTTTGAAGCACTTAGGAATAAGGGAATATTTCTCAGAGATTAACACTAATCCTGGTTATCTTGATGGAGAAGGAAGG TTAAGAATTTTGCCTTACCATGACTTCAACAAGGCTCCTCATGGCTGCAGTTTGTGCCCACCAAACATGTGCAAGGTATA AATCTTCCCATCCATCATGATTTTCTTTGTCAAATAGAAAAGAAAATTATCTTAAAACATGTTGTGAACCTGCCTTTGAA TTGAATCTTTTTGAGCCTATTGATAAGTTTAATTTTTTTTTTTGAATTTATGACCAATATAATTCTAAACTAATTCATTC TTATTTTTGAAAATTTTCAGGGTTTAATCATGGATAGAATCCAAAATTCATTTTCTCAAGAGGATGACAAGAGAATCATC TATCTTGGTGATGGGGCTGGGGACTATTGCCCAAGCTTAAGGCTTAAACAGAGAGATTTCATGATGCCAAGGAAGAATTT TCCTGTGTGGGATTTAATATGCAAAGACCCTTCACTTCTTAAAGCTGAAATCCATGGCTGGAATGATGGAGAAGAGTTGG AGTTTGTTCTCTTGCAGTTGATCAACAAAATTTCTATGGAAAAAGGCGCTCAGTTCATATCATCTGATTGCAAAATACAG TCTCTCCCTATCTCTCCTTATGAGCCTTTGCCTAAAGTTGTTCATGTTCGACTATAATTTCTTACTTTAGAATAGCTTCA AATGTATAAGAACTTTAGTTTTTTTTGGTTGCTTATGTTGAATCATTGGTTCCTAAAGTTACTAATCTTGGAATTGGTCC AAGATGGAGGAAATGTGTACTTTCCATCCAACATAAATATGAGTTTTCC
CDS sequence (LotjaGi3g1v0426700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCTGGAATTGTGGTGGTTTTTGACTTTGACAAGACCATTGTCGATTGTGACAGTGATAACTGGGTTGTTGACGAGTT GGGTTTCACCGATTTGTTTAATCAGCTCCTTCCCACCATGCCTTGGAACTCCCTTATGGACAGGATGATGATGGAGCTTC ATTCAAAGGGTGTAACTATTAAGGAGATTGAAGAGGTTCTGCATAGGATTCCTATTCACCCCAGAGTAATACCTGCTATT AAAGCAGCTCATGCTTTAGGGTGCGATTTGAGGATTGTGAGTGATGCAAACGTGTTTTTCATTGAGACAATTTTGAAGCA CTTAGGAATAAGGGAATATTTCTCAGAGATTAACACTAATCCTGGTTATCTTGATGGAGAAGGAAGGTTAAGAATTTTGC CTTACCATGACTTCAACAAGGCTCCTCATGGCTGCAGTTTGTGCCCACCAAACATGTGCAAGGGTTTAATCATGGATAGA ATCCAAAATTCATTTTCTCAAGAGGATGACAAGAGAATCATCTATCTTGGTGATGGGGCTGGGGACTATTGCCCAAGCTT AAGGCTTAAACAGAGAGATTTCATGATGCCAAGGAAGAATTTTCCTGTGTGGGATTTAATATGCAAAGACCCTTCACTTC TTAAAGCTGAAATCCATGGCTGGAATGATGGAGAAGAGTTGGAGTTTGTTCTCTTGCAGTTGATCAACAAAATTTCTATG GAAAAAGGCGCTCAGTTCATATCATCTGATTGCAAAATACAGTCTCTCCCTATCTCTCCTTATGAGCCTTTGCCTAAAGT TGTTCATGTTCGACTATAA
Protein sequence (LotjaGi3g1v0426700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSGIVVVFDFDKTIVDCDSDNWVVDELGFTDLFNQLLPTMPWNSLMDRMMMELHSKGVTIKEIEEVLHRIPIHPRVIPAI KAAHALGCDLRIVSDANVFFIETILKHLGIREYFSEINTNPGYLDGEGRLRILPYHDFNKAPHGCSLCPPNMCKGLIMDR IQNSFSQEDDKRIIYLGDGAGDYCPSLRLKQRDFMMPRKNFPVWDLICKDPSLLKAEIHGWNDGEELEFVLLQLINKISM EKGAQFISSDCKIQSLPISPYEPLPKVVHVRL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
PANTHER | 1 | 270 | 270 | 3.5E-157 | – | |
PANTHER | 1 | 270 | 270 | 3.5E-157 | ||
PIRSF | 1 | 239 | 239 | 3.3E-95 | ||
Gene3D | 3 | 188 | 186 | 2.5E-26 | ||
TIGRFAM | 4 | 199 | 196 | 4.5E-57 | ||
Pfam | 4 | 235 | 232 | 2.0E-98 | ||
SUPERFAMILY | 4 | 190 | 187 | 6.24E-27 | ||
TIGRFAM | 5 | 187 | 183 | 6.4E-31 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Phosphatase activity | Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate. |
Expression pattern of LotjaGi3g1v0426700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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