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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0447200 |
| Transcript ID | LotjaGi3g1v0447200.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Two-component response regulator-like protein; TAIR: AT2G20570.1 GBF's pro-rich region-interacting factor 1; Swiss-Prot: sp|Q9SIV3|GLK1_ARATH Transcription activator GLK1; TrEMBL-Plants: tr|V7BXL1|V7BXL1_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0447200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:86027775..86033847) extracted from Lotus japonicus Gifu genome v1.2.
TGAATGAAAATCATTGGAGTGGGTAATTGTTGAGAGAGTGTTGAATTGGATAGAGAAGATGATGTGGAGTGTTGGCAAGA AAAAAAGTGGTGTTGAGAGTGTGTAATTTAAACAAACCATTGTAAATGGTCTTATATATGAAAAGACAATTCTCAACTCT TAAGCTAGCTTTTGAATTAAGTTAGTCTCCCAAATTCTTATATGGTACCAAAGCATATTCTAAGATCCGTTAAGTGGAAA CCACATGTGCATAAGGCACTCGTAGATATGATGTTCATTCTTGCATATCTCCTACTCCATATGTCATACCCTGGACGCGA GAGGTGCATTGAGAAGTCTCACGTTGACTAAGATAGTCATTTTATACGGAAGATAATCATCAACTTTTAAACTAGTTTTT AAGTTGAGTTATGTCTTCCAAATTTTAATTGAGACTACCAAATTATCATGGTCCTAATATGTTAGGAGAATGAAAAGCTC CGGTAGGTGGCCTTTTGCTCTAATGTATTTGCGGATGCCCTAACCCTGTAAGATTAATTCTGCTGTAATTGAGACTTCAC GTCTCTTGTTTTTTTTTTTTTTTGAAATTCACGTCTCTTGTTTAAATTGAAATTCTGTTTGTTTGGAGAAAAAAAAAAAG TACAGGAATTTTAGAAATTACACATTATAATATTTTCTCATAAATGATTGAGCCTTTTCATCATAGAACCAAACACCACA TAGAACAACAGTCAATTAGCTGGATCAATTAACCAAACCCAAGTATTTTGGCTAGCCATGACCCAATTAGCTAGACATAG TCCAATATTTTTTTCTTGACGCTAACAAAAGTGTAAAAGAAATTATCATTAGTATTTATGCTCTTTTGAGTGTTGACGAA GAGTTTTCCTTCAAGACATTTATTTGAGGAATATTCATCAATGATCCGTCAAAGTAACAGTAGAAGTACAATGTGCTAGC TAACAAGTATTGAGAAACCATGTAATTAATAAACTTGGTTTCCAATTTTTTGATTATCATGGAAACAAGATATACATTAT CCATTAAGCAGCAGGAACGCAAATTAATACATCGGTCAATTTGTCCACCAACACATCAATCAACATGGCTAATAACACAA CACATCCCTTTCATTTTCCACTGTTTTTTTGCAACTTCCAGCAGAGTGACAAATAATCTCTCTCTCTCTCTCTTCATACA TATCCATTTCACCTTCGAAAAATTTCATTATTTAAATCACAAAAAATTCACGAACACACACACCTGAATTTTCAAAAACC ATTCTAGATCCAAAAAAAGGCCATCCACAAAACCAAAATGTATAATATATAATAGATGCAGACCAACACTGCAAGTAGCA TAGGCGCAAACAAAAAAACATATAAAACAATTTCTCTTTTGATACTAGACCTAAGTTGTGGTTGTGAGAAATCCAAGCTA CCTCTTCATCACACATACTCTCTCCTTCCAAAAAAAGCCATTTTCATATTCCATTAATTGCAGTTCTCTCTCATTCCCTG CACAAGCATATTCATCTTCCAAAAAAAGTAAACCGAATTTGTTGCATATAGTTGAAATTCCCCATCTTCTTTTAGCATTC CCCACCTTTTTTACTACACTTTCATGCACTGTTAGGTCAATAGCTTGCGTGTTGGGATTTGTGTTGAACTCTTCAGAATC AATTCTGTCACACAGACTCACCACTTTACTCAGAATTGATTTTGCCTTCAACGTGAAAATCCAACTAGTTTCCTCACATG TTATTGTAATTGTCTCATCTTAAGAGACATGTTGTAAAGACTTTGTCATCTCAACCTAATATTCCTACAAAATTTAGTGA TTTCATAGGCAAATTCAGGTTGCTTTAAATAGAGTGAGGAATTTAAGAACTAGAATTCATGCTCACTGTGTCGCCTTTGA AGAGCACAATGGAGATCATGGAGAATTTTTCAATCGGAGAAGGTCATCATCATGTTGACTTTGCTGACCTTTCAGATGGG AACTTGTTGGAATGCATTGACTTCGACGACCTCTTCGCCGGCATCGATGTCTTACCGGATCTGGAGGTGAACATGGAAAT GCTTGCTGAGTTCTCAGTCAGCAGTGGCAGCGATATTGAGTTATCGGTTTCGGGTGCAAATAGCAAATCTGATTGTGATA GGAATGATTGTTTAGTTACTGAGAAGGAAAAACAAGATGAAGAATATAAAGGGGCTTCTTCAGATTCTTCTGGTAGCAAT TCAGGGTCTGAGGAGATAGTGAGCAAAAGAGACCAATCAGCCGAGGCGAATCCATCTCCTAAGGAAGGTGACAAAGGAAG AAAATCATCATCATCAGCTCAATCAAAGAATCCTCAAGGGAAGAGAAAGGTGAAAGTAAGTAGCTATAATTATTACTATT GGTATTTGCTAGCTAGCCTTCTTATTTTGCTCGCGCATATGTTTAGATCTTTTTCTTTTCCTTATAATCAATTCTGAAAT TCAGAAGTTGCTATCTACTGATAAAAGGCTTTACTTAGAATTTATTATGACTCTGGAATCCACTGGAGAAGAAATTCCAA ACATATATTCAGCGAGTTTAGTAGCTGTCGCTGCATTCTTAATTAGGTTTTAGACAAGTTTATGTATTTCTGTAAGGTTC TGTCTCTATCTCTATTATGAGTGTTGCCAGATTGAAAGTGCATGTGAAAAGAACTCACGGGGTATTGTAAGTTTTTGAAA GAGAGAGATGCACCAGGCAAAAAAGTGTGTGAGAATTGACACCTGATTCATTATTTTGCCGGATTTTGATTTGTAGTAAC TAACAGCTTTGTGTTTTCTTGGGTTGTGTGAAGGTGGATTGGACACCAGAATTGCACAGGCGATTCGTGCAAGCAGTGGA ACAGCTTGGAGTAGATAAGGCTGTGCCTTCAAGGATTTTGGAGATTATGGGAATTGACTGCCTCACTCGCCATAACATTG CTAGCCACCTTCAAGTATATATCCTTCAACTTCTTCTTCCTCCCCTTCTATATTGATTTTCAATTCTCTTCTACCAATTT CAAGCAACAAGACTCAAAATGAGTACTTTCCTTTTTATTTTTGTAGCTAGAATTGCTTTAGCTATTGAATAGCTTGTTGC TTAATTTGCTTTAAGATAGAAATTTGCATGTAACGCCAAAAAAATATGAACTCTAAATAATGCTTGGACGTGTTTAGGAC TAAGAGTAGCCTCAACTCAAATTTGCAATATATACTTACAACATGTTTGTTTTGATTCACTCATAATCTTATCATAATTA TTTTTTCCTTCATATACAGAAGTTGCTCCTGTAACAGAATTAATTCTCTTTCATAAAAATCAATTCTAAAATGCAGAAGT TATTTATAGAAGTCTATTTCTAGAATTGATTTCATTTTCAAAGTCAATTGTAGAAGATTTTCAAACATGCTATAATTTAG CAATTTCCGCGAAAATCATTTTCCTCAAATTAAAAAACCATCAAAGTTTTCAAACACTCACTTAATCTAAGTCTTAAAAA GAGTAAAATGTTTTGATGCATTAACATATCTCATTTTCTTTTACGATTATGTGTAGCGTGAACATAAGAGTTGAGTGAGA TAAAGAGTGAAGAGACACTCATACTATCTCTTTTTTCTTTTTCAACTATATCACTCATCGTATTACTTATTTCTCTCTTT TATATCACTATCTCTGACTATGTGTGGATTGATTTAGGTTCTTAACATGTTTTTTTTTCCAGTTTTAAACTATATAGTTG CATGTGGATGCAGAAATATCGATCGCATAGGAAGCATTTACTAGCGCGTGACGCTGAAGCAGCAAGATGGAGTCAACGGA GGCAAGTGTTTGGTGGTGGAGGAGGAGCAGGGAAGAGAGATATAAACCCTTGGGTTGCACCCACCATGGGTTTCCCTCCC AATCACATGACACCACCACCAATGCACCATTTTAGACCTTTACATGTTTGGGGCCATCATATGGACCACCACTCCTTCAT GCACATGTGGCCTAAACATCCACCGCCACCATATGCACCACCACCACCAGCATGGCACCAAAGGGTTAGTTCTCTTCTCT TTCAAGCACATACATAATTTGAGCGCTATCTAGCTCAATTGCTTGCAAACCCTTGATTCATTGTATTTGGACACCAAATG CAATAGCTAATTCTCAGGACTTAAAAACTTTCTCAAAACAACCAATACCATATAGTTTATGCTTTGTAATTTGTTTGTCT AAATAGAGTTATTATTGTTGATTGATACAGGCTCCAAACGCACCAACACCAGGAACTCCGTGTTTTCCACAACCTCTGAC AACAACGGTGACTATTCGCCCCACTTTTTGGAATCATTCATGTTGTCTTCTCCTTCCAAACTTAGATCCTTTTCTGAACA ATTTAATTAATTTAATTACCGTATAGAATTATTTCATATTTACTCACAAAATTCATATATAGTTTTGGTATTTCACTGCT CACTATATAGAGGAAATAATTCAAATAAACATGCAGAGATTTGGAGCTCCAACTGTTCCGGGCATTCCACCACCACCACC ACCTCGCGCCATTGGCGTCCTCGCCGGGCAAACACCTCCTCCACCACCCCTCTTCGACTTTCATCCGGTAATTTTTTCTT CATATTAGATCCTTAATTATTTTAAATTCTCATCACAAATTTTAGTCCTTTCTCATTTTCATACTTTTTTTAGTATTTCA TTTTTATTTACGAGAAAAAATCATATAATTTTTGTGGATCTTTTACCCTTCTTTTATCTATAAAAGTGGGTGTTTTTAAA AAAAAGGTGTAAAAAATATTTTTTCCTAAAGTAAATATATACAAATAAACAAGACTTGTAACTCATAACTAAACCTAAGA TTTATTGTGAACTACGTAACCTTGATATTGATAGTTAACGCACTTTGCCTCTTTGGCAAGTCAAATCATTTACTTGGAGA CACAAGCAAAAATGTTTCCATGTATGCAAATAAAATTAGGGCAATGTTCTGGTGCCTTGATGAAATTAAAAAGAGGCTTC AGTATCATTTAATCTATTATTTAAAATATTTTAATTAGATTGTAAATTATAAAAAAAATCAAGATAAATGTACAGAATTA ATCCTCCATTTTAAACGGGTCGATAAATCACCATAAATTTATGGTTTTGTTAATTTCCTTCCCTCTTTCTTTAACTCCTT TCCCATCATTTTCTTACTTATCTTCACAACGCATCATTGTTCGTCCACGTCTATAAAAACAAAGTTTCGTTTGTTGGATT CACATTGCTCTCACGGGCAGTCTAATTTCATCATTTGTATCGTTAGCAAAAACAAAAGAAAATGCAAAATATACTAGTTA TTTGTTTTCTCTAAAATAAATGCTTGAGCATTATCAATATTATTTCATGGTTAATATAATAATTGTTTTGTGTTTGACAG TCAAAGGAAAGCATTGATGCAGCCCTTGGTGATGTTTTATCTAAACCATGGTTGCCACTGCCTCTTGGCCTTAAAGCTCC AGCACTTGATGGTGTCATTGGTGAATTGCAGAGACAAGGAGTTCCCAGACTTCCACCCTCTTGTGCTTGAAATTAAAGCC AATCCCATACGGGGAGATTTTTTTCTCAATGCGCGGTGGGAAGGACACAAAACCCTAATTCGACGAATTTTCAACTCTAG CTCTTCTATTGCACTTGCATGTTAAATGCGTGTGCTTGTTTCTCATCTTTCTTCATTTTGCTTGTTTTAGCAGAAAGAGT GGAAGAAATAACCTGTAAAAACCTTTTTAGTTGCTATATCAAGCACGAATAGCTTCAACTGAAGTCTTTGTTGTAGCCAT TTGGTGTAATGTGTACAATTATGAGGCTGTGAGTTTTGTATTGGACGCATGATGATCATATTAGACTAATAAGGTGAGGA ATCTCAATAAAGTGCTTTAGTGATCAAACATTTCTTTTGGATTTGTTTAGTGTATGTGTGGGTATTTAGTCATCATATTA TGTCACTACAGGAAATGGTTGACTAGCGTAAAAAATTAGCATTAGCCTCGACACAAACATTATAAGTTTAGGC
CDS sequence (LotjaGi3g1v0447200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCTCACTGTGTCGCCTTTGAAGAGCACAATGGAGATCATGGAGAATTTTTCAATCGGAGAAGGTCATCATCATGTTGA CTTTGCTGACCTTTCAGATGGGAACTTGTTGGAATGCATTGACTTCGACGACCTCTTCGCCGGCATCGATGTCTTACCGG ATCTGGAGGTGAACATGGAAATGCTTGCTGAGTTCTCAGTCAGCAGTGGCAGCGATATTGAGTTATCGGTTTCGGGTGCA AATAGCAAATCTGATTGTGATAGGAATGATTGTTTAGTTACTGAGAAGGAAAAACAAGATGAAGAATATAAAGGGGCTTC TTCAGATTCTTCTGGTAGCAATTCAGGGTCTGAGGAGATAGTGAGCAAAAGAGACCAATCAGCCGAGGCGAATCCATCTC CTAAGGAAGGTGACAAAGGAAGAAAATCATCATCATCAGCTCAATCAAAGAATCCTCAAGGGAAGAGAAAGGTGAAAGTG GATTGGACACCAGAATTGCACAGGCGATTCGTGCAAGCAGTGGAACAGCTTGGAGTAGATAAGGCTGTGCCTTCAAGGAT TTTGGAGATTATGGGAATTGACTGCCTCACTCGCCATAACATTGCTAGCCACCTTCAAAAATATCGATCGCATAGGAAGC ATTTACTAGCGCGTGACGCTGAAGCAGCAAGATGGAGTCAACGGAGGCAAGTGTTTGGTGGTGGAGGAGGAGCAGGGAAG AGAGATATAAACCCTTGGGTTGCACCCACCATGGGTTTCCCTCCCAATCACATGACACCACCACCAATGCACCATTTTAG ACCTTTACATGTTTGGGGCCATCATATGGACCACCACTCCTTCATGCACATGTGGCCTAAACATCCACCGCCACCATATG CACCACCACCACCAGCATGGCACCAAAGGGCTCCAAACGCACCAACACCAGGAACTCCGTGTTTTCCACAACCTCTGACA ACAACGAGATTTGGAGCTCCAACTGTTCCGGGCATTCCACCACCACCACCACCTCGCGCCATTGGCGTCCTCGCCGGGCA AACACCTCCTCCACCACCCCTCTTCGACTTTCATCCGTCAAAGGAAAGCATTGATGCAGCCCTTGGTGATGTTTTATCTA AACCATGGTTGCCACTGCCTCTTGGCCTTAAAGCTCCAGCACTTGATGGTGTCATTGGTGAATTGCAGAGACAAGGAGTT CCCAGACTTCCACCCTCTTGTGCTTGA
Protein sequence (LotjaGi3g1v0447200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLTVSPLKSTMEIMENFSIGEGHHHVDFADLSDGNLLECIDFDDLFAGIDVLPDLEVNMEMLAEFSVSSGSDIELSVSGA NSKSDCDRNDCLVTEKEKQDEEYKGASSDSSGSNSGSEEIVSKRDQSAEANPSPKEGDKGRKSSSSAQSKNPQGKRKVKV DWTPELHRRFVQAVEQLGVDKAVPSRILEIMGIDCLTRHNIASHLQKYRSHRKHLLARDAEAARWSQRRQVFGGGGGAGK RDINPWVAPTMGFPPNHMTPPPMHHFRPLHVWGHHMDHHSFMHMWPKHPPPPYAPPPPAWHQRAPNAPTPGTPCFPQPLT TTRFGAPTVPGIPPPPPPRAIGVLAGQTPPPPPLFDFHPSKESIDAALGDVLSKPWLPLPLGLKAPALDGVIGELQRQGV PRLPPSCA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 408 | 408 | 2.4E-190 | – | |
| PANTHER | 1 | 408 | 408 | 2.4E-190 | – | |
| MobiDBLite | 95 | 161 | 67 | - | – | |
| MobiDBLite | 106 | 121 | 16 | - | – | |
| MobiDBLite | 122 | 143 | 22 | - | – | |
| Gene3D | 154 | 215 | 62 | 1.5E-26 | – | |
| ProSiteProfiles | 154 | 213 | 60 | 18.042 | ||
| SUPERFAMILY | 155 | 214 | 60 | 4.48E-18 | ||
| TIGRFAM | 157 | 211 | 55 | 1.3E-26 | ||
| Pfam | 160 | 209 | 50 | 5.1E-8 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | DNA binding | Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid). |
Expression pattern of LotjaGi3g1v0447200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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