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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0452200 |
| Transcript ID | LotjaGi3g1v0452200.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Kinase family protein; TAIR: AT2G20635.1 protein kinase and Mad3-BUB1-I domain-containing protein; Swiss-Prot: sp|F4IVI0|BUB1_ARATH Mitotic checkpoint serine/threonine-protein kinase BUB1; TrEMBL-Plants: tr|K7LU99|K7LU99_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0452200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:86576981..86582983) extracted from Lotus japonicus Gifu genome v1.2.
TCAACATCTCACCTTCCTCACATATGGTCTCTTCACTTAGCAAAAGGAATTTTTTTGGCACCTGTTGATGTGAACATAAG GGGGCTCTTAAACATTGAAAGACAATGACCAAAAAAAGGATAAAGAAATATGAAAGACGATAAAGAAGATCAATTTGCAT GATCAAGAAGCCACTATGAACAATACTGGTTCTTAGAAATTTTGCACGAAGCTCTTCCTCACAATAAGGTAAAATGAGAT TTTTAATTTCTCACCTCAAACACTCAAAATTTTCGTGAATGATTTTCCACAAATCAAAATTTCAAACCACCGTTGATGTC TCAAAAGATAGCTCAAGTGGTAAGAGTTGGAGAGACATATGAGTTGAGGAAAGGAAGGTCGAAATATCATTTCATTTTTT TGTCGATCCAAAGATCATTTCCTGATGAGTGTAATTTATTTTTGCGATGTAAAAAAAAACCACCGTTCATGGCCCAGCCC AATGAATTTTTTTTTCTAAAATAAAAAAAACCGGTAGATTCAAAATCTCGAATTTCCGCGCCTCACTCACAAATTCACAC CTCTCTCTCTCTCTCTCAATGGCGAGGCTCCCCTACTCTCATCGTTCCAGAACCGCCATGGACGCTCATCACGATCCTCT CTTATCTTCCCTCTGGTTCTTCTCTTCTCTTCTCTTTTCCTCTCTCACTCACACTCACACACCTGCACAGTTTTTCATTT CCCTAACTCACTTTTTTTTTTCTCTCGCAATTCCAGGGCCATTCGGAAAGCCCTAGAAGCTTCCAACAATTCATGCCCGA ATCTCAGTAACTTACTCCGAGACTGCATCAGAAACTTCAAGAACACTGACCGGTACCGAAACGATGTCAGATTTCTCAAG ATCTGGCTCCTCTACGTAATTATCCAACTAACCCTCCCTCTTACTGAAAATTCGATTTCGTTGGTGTTCAATCAGCATGT AAATGATATGTATCTATCTGGATCGAAGATTAACACGCTAACATCACATGTAACGATAACCGTTTCGGCTAATTTAATTA GTAATTACAGATGCTAATTGCAACTACTGTATGATGATTTAGTTTCTTAATATGCCATTTAACATGTTATATGTTATTAT CAGAATACAATTTTCTCTTTTACTAATTAGTAAAAATAGAGGAATAATTGATCAAATACTAGTTAATGTTATTTTGGATT TTCAAGATGATAGCTAAATAGGAATAGGAAATTTCTTCTAAAATCACCTAAAGCTAAGGAAAATTTACATTCCAGAATCA TTTTCCCACAATCAAATGAAGGAATAGATGAAAAAGATTAAGTGAGTTTGAGATTTCTTTTTTTGGTCTTTGACGGATGT CACTACTCGATCAGGAAACAATTGCATGTCCCTCCCAACAAATGTCTTTTCCGGGATTCGAACTTGTGCTATCATCCTTC CCGGATATAGCTTGCTTACCAATAGACAAATTTTAGATTTCTAAAACAATAGAAGTGCTGAAACTAAAGGAAAAATATAA AATAACATAAGGTATGGAATGTAGGTAGTAGAGGAGGGAGTGATATAACAGTTAGGTGTTGGATGCATGTGTGTTAATAA CATAAACCGTTTTGCTGCTGGATGGTACATGGTCTATGACTATGATGTGATGAGGAATGTTGTTGCTTTGAGGCAATCTG GATTAGGCTTAGCTTGTTTCTGTTGGTTTTTTTATGCAGATGGGAGTCAGTTCTGATTTTGATAGTGTATTTAAGGAAAT GCTGGATAGCAATGTGTGTGTCAACAATGCTTCACTTTATGTGTGGTCTGCGTGTTTTTTTGAATTCAAGGGAAGATTGC GCGATGCCCTCACGATTTATCAGCTTGGTGTTTTCAGGTCAGTGTTGGTGGGTAAGCTTTTGTGACCTGCTTCTTTTGAT ACCGCAAGTCGTAGAATAAGGGTCGTAATTTCAAATTTTATGTTGGGTCGATGTTTGATAGGAATGCAGAGCCAACTGAT TGGTTAAAGAAGGCGCATAAATTATTTCTCAACCGGATTTCTGAAATTCGGAATGCTGCTTCAAGCCAGAAGGTATGCAT ATCAGAACAGTCCCTTGCAGTTAAAAGTTGAGCCATGTTTAATGTACTACTCATCTTTATGATCTCTTTCACTTATTTCC TCAACATTATGCCAGTTCAATTTGAGATTTCTTAACACTAACCTAATAGCATGTTTGGAAAACAATTAAGTTTTCAAGTT TAACTACTATTGTTTTAAAATGAGAAGCTAGTCTCCTTAGTACCTATCAAGATGAATTTATTCTGAATTATATATTGCAG ATCCTAAGAAATCTCATTTGATTTATGATTTCAGGTTGAGTCTAAAGAATCTGCGAAATTGGAAAACAGTGGCATTGATC CATGGGATACCTCCACCATGGACAGTCTGTTGAAGAAGATAAATCCTTTAATTAAGAAATTTGACGTGAGATATTTTGAT CCTTTGTTATCTACATGCTTTGGTTTAATATAATTGTCAACCGTTATGTTCCCTTATGTTTCTTTAAATACATTTCAGGG ATATCATTCTAGCACTAAATCTTACCTCGGAAAAGTTGCCTTGTCTGCTTTGAAGAATACCTCAAGGAATAAAGTTATAG AAATAGGTTATACTCTTTAGTCTCAATCATATTTATCTTCTGCATATTGTCTTACTGCTTTCCCGCTCTCTGTATATGAA CGACCAACTTGAAGAGTCCAATTTCATCTGAATCCGCCTGTTTTATATTTTCTGCATTATGCTAGTACTTATGAAACCAC AAATTTGTTTGGAGACCAGTTCTTCTTCCAAACAGAAAAAAGTTTTTTGATGTAGAAAAATGTGTCCATAGTCATTTTTT GCATGTAAAGGTCTTATTAGAATGCAAAACAATATGTATAGGACTCTGATCATACCCCTAATACTTTAGCCTGCAATGAT GAAGTTGTATATTAGATCATAAATATGTTCAGGAGTACGTTTAAGTGAGCTTATGGTAAAATTTCATAGGCAGAATAACT TGCTTTCTATTCATTAATCATCACCTTAATATTTTATAATCTCTGTGTTACGAGTCTATAGTTGTCAGCTCATGTAACCG CTGGTTCTCTAGTTGTTTGAAGTATGAAATGTTAAAAAATTAACCTCACTATGAAATGTGCAATCTATGATGAATTTGAA TTTGTTACATCTCCCGTTTTTTTTTAGCTTGTCTTCTAAAGATAAATCATGTTTCAGGTCAGTTTCTATAAGAATAAGGT ATATTTAATTATTTCTCTATAAGCTGTTTCCTCAACCGGAAGCTTCATTCAGTTACTAACAACATTATTGCTTTTTTTGC TCTTATGCTGGCCTCCAAAGGTGGAAAGAAGTACCATATCAAGGGCTGTGCTGGACAGGGTGGTTTTGCTCAAGTATACA AGGCATATGTCAACACTGATCCCGATGTCCTTGTTGCACTAAAGGTGATGAAGGCCTTTCAAATCATTTTTCTCACTGAC GTAGACCATTGTCTCATCGGGTTGTATTTTGAACGTCAAATGCCAGATACAAAGGCCAGCTTTCTCCTGGGAATTTTACA TGTACCGGCAGCTTGATCAGCGCATCTCAGGCGGACAAGTATGCCAATATCAATTATATCATCAACCTGCCTTTTCTATG AACATCCTATTCTGAGTTCTCTGACATCTTACTATATCAGAGGTCAAGCTATGGATTCGCCCAGAGAGTTCATCTTTATT CTGACTTTAGCATACTCGTCTGTGACTATCTACCTCATGGGACTCTACAGGTCAGCTATCTCTTTGGATTCCCTTTTTTT ACCTTTTTCAAAAATTCGAGGTGTTAACTTTCAGCTGAAATTTTATGCAGGATGTCATAAACTCATATGTGGTCATGCGA AAATCCATGGAAGAAGTGTTATGCATTTATTACACAATAGAAATGTTACACATGGTTGAAACTTTGCATGATGTTGGCTT GATTCATGGTGATTTCAAGCCTGATAATCTGCTTATTCGCTATGCTAGGTAAATGTTGTAGTCATACTTGAGGCACTATT TTTTAACATACCTCATGCTTGTACAAGCAGAATTCTAATATTTCAATTCCTCCCTATCTTTTCCGGTGATAGTTCGTCCC TTTCCTTGTTTGTTTGTATCTTGTAATACTGCAATTTCGAAGCTTTTTCCCTTAATTTATGAGGATGTGACTTTGTATCT AAAGTATGTGTCCAATTGATATTATATGCTTATCTAAGGATATGGAGTTTACAAAGGCCCACACATCTAGCCAAGCATCA TCTACAGGAGTGAAAACCAAAGGCATTATTGATGTAGTTGCATAAACATGTCTTGCGATATATACTGACAGAAAGATATA CATGGCAGTTTTTTGAAGACCTTTGATTGAGTTATAACCTACTTGCAAATGCTTCAAAGTTTGTATGATAATGCATGTTC TGATCATCACACATCAGATCTAAGTTGTTTATAATTTATATGATTTGCATTTGTGGACGGTGCACATTACATTTCTTGCT GTGTTGCAGGGGTGACCTTACAGAAGATGGGTTCTTGGACCGCAGTGGTTCTTGGCTAGATCAGGTCAGTTTTTCTCCCA AAGTTATAGTCAAATTTTATTGTTGTTAATGTTATTAAACCGTACATATTGTTTTATTTTGCAGGGCCTTTGCCTCGTTG ACTGGGGAAGAGGGATTGATCTGCATCTCTTTCCAGATCACACGGTATTTATGGGAGATTGCAAAACTTCTGGTTTTCGC TGCATTGAGATGCAAGAGAATAAGCCATGGAAATTTCAGGCAAGTCACTTCATAAATCACACTACAAATGCAATGAAGCT TATTATTGACTGTCCCTAAAGTTTCCTTTCTCATTCACTTGCCAACAACAGGTAGATGCATATGGTCTTTGTGCTGTTGT CCATGTGATGTTGCATAATTCCTATATGGAAATCGTCAAAAAAGAGTCATCCGATGGGAGCTACGAGTATCATCCCAAAC TACCCTTTAAACGGTATATCCCTCATTTTATAGCTGTATGCAATTGTTACTTCTGGTTAGGCCTGTGATCTGTAGCAAAA GTTGTGTCACAATTTGGATATTTTCCAGTTTCTGTGTTGCTATTTGCTAAAGTCAATTTGGAAACTTTAATGCCATAATG GAAGCGCTTCTCACCCCTTTGTTTCCAACTTCTTTTTAACCCTGAAATTTTGCTTGTTGAATTAAATAGTTACTGGAACG TTGAGCTGTGGAAGACTTTCTTCACTAAGATGCTAAATAAATACCCCGGCGATGATGATAGAAGGTTGCTGCAAGATTTG AAAAAGTCCTTCCAGGATTATATGGGCTCCAACCCCCAGCTTATAAAGAAATTAAAGGAGTTACTCGCGAAGCAAAGAGC TTCATTGTGTTCTGCATAGTGTTTGAAGGTCATTACACACCCACTTGTGTTTAAACTTCAAACGGTCTTGCAACTGAAGA GTCATAACATGTATGAAAATTGAAAAATACACAATACAAGCAATCAAAGACAGACCTAGAAGGCTAGAAGGTTATCTTCC AACACATATCTTTGATTATGAGCAAGATTCTTTTTCATCTATATATACTTTAGAAAAAGGCTCATTTTAGAAGTTATTTT CTCTTAGTTGCCCTGCGTTAGCCTCTATACTGCTAACTCTTCAGTTTCTTGTCTTCTGTAATTAGAGTAATGGTCTAGAA TTTAACTTTCCAAAGGTGTACATGTGTAAATGCAGAGTATCGTAAGCAGGTATGACTGTTGTGTTTGTATATATCTTTTT TACTGCGAAGGGCTTTTCATGGACGAATTCAACATAACGTTGCTCAGGACGGATTCTTGCAAAATTCTAATAGATGCAGT CAAGTATACCAAAAACAAGCGCTTTGTCAATAAATTGTTGCACATAAGTTAAATCTATAAGGATTTTATGTGGGCATTTT CAG
CDS sequence (LotjaGi3g1v0452200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCGAGGCTCCCCTACTCTCATCGTTCCAGAACCGCCATGGACGCTCATCACGATCCTCTCTTATCTTCCCTCTGGGC CATTCGGAAAGCCCTAGAAGCTTCCAACAATTCATGCCCGAATCTCAGTAACTTACTCCGAGACTGCATCAGAAACTTCA AGAACACTGACCGGTACCGAAACGATGTCAGATTTCTCAAGATCTGGCTCCTCTACATGGGAGTCAGTTCTGATTTTGAT AGTGTATTTAAGGAAATGCTGGATAGCAATGTGTGTGTCAACAATGCTTCACTTTATGTGTGGTCTGCGTGTTTTTTTGA ATTCAAGGGAAGATTGCGCGATGCCCTCACGATTTATCAGCTTGGTGTTTTCAGGAATGCAGAGCCAACTGATTGGTTAA AGAAGGCGCATAAATTATTTCTCAACCGGATTTCTGAAATTCGGAATGCTGCTTCAAGCCAGAAGGTTGAGTCTAAAGAA TCTGCGAAATTGGAAAACAGTGGCATTGATCCATGGGATACCTCCACCATGGACAGTCTGTTGAAGAAGATAAATCCTTT AATTAAGAAATTTGACGGATATCATTCTAGCACTAAATCTTACCTCGGAAAAGTTGCCTTGTCTGCTTTGAAGAATACCT CAAGGAATAAAGTTATAGAAATAGGTGGAAAGAAGTACCATATCAAGGGCTGTGCTGGACAGGGTGGTTTTGCTCAAGTA TACAAGGCATATGTCAACACTGATCCCGATGTCCTTGTTGCACTAAAGATACAAAGGCCAGCTTTCTCCTGGGAATTTTA CATGTACCGGCAGCTTGATCAGCGCATCTCAGGCGGACAAAGGTCAAGCTATGGATTCGCCCAGAGAGTTCATCTTTATT CTGACTTTAGCATACTCGTCTGTGACTATCTACCTCATGGGACTCTACAGGATGTCATAAACTCATATGTGGTCATGCGA AAATCCATGGAAGAAGTGTTATGCATTTATTACACAATAGAAATGTTACACATGGTTGAAACTTTGCATGATGTTGGCTT GATTCATGGTGATTTCAAGCCTGATAATCTGCTTATTCGCTATGCTAGGGGTGACCTTACAGAAGATGGGTTCTTGGACC GCAGTGGTTCTTGGCTAGATCAGGGCCTTTGCCTCGTTGACTGGGGAAGAGGGATTGATCTGCATCTCTTTCCAGATCAC ACGGTATTTATGGGAGATTGCAAAACTTCTGGTTTTCGCTGCATTGAGATGCAAGAGAATAAGCCATGGAAATTTCAGGC AAATGCATATGGTCTTTGTGCTGTTGTCCATGTGATGTTGCATAATTCCTATATGGAAATCGTCAAAAAAGAGTCATCCG ATGGGAGCTACGAGTATCATCCCAAACTACCCTTTAAACGTTACTGGAACGTTGAGCTGTGGAAGACTTTCTTCACTAAG ATGCTAAATAAATACCCCGGCGATGATGATAGAAGGTTGCTGCAAGATTTGAAAAAGTCCTTCCAGGATTATATGGGCTC CAACCCCCAGCTTATAAAGAAATTAAAGGAGTTACTCGCGAAGCAAAGAGCTTCATTGTGTTCTGCATAG
Protein sequence (LotjaGi3g1v0452200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MARLPYSHRSRTAMDAHHDPLLSSLWAIRKALEASNNSCPNLSNLLRDCIRNFKNTDRYRNDVRFLKIWLLYMGVSSDFD SVFKEMLDSNVCVNNASLYVWSACFFEFKGRLRDALTIYQLGVFRNAEPTDWLKKAHKLFLNRISEIRNAASSQKVESKE SAKLENSGIDPWDTSTMDSLLKKINPLIKKFDGYHSSTKSYLGKVALSALKNTSRNKVIEIGGKKYHIKGCAGQGGFAQV YKAYVNTDPDVLVALKIQRPAFSWEFYMYRQLDQRISGGQRSSYGFAQRVHLYSDFSILVCDYLPHGTLQDVINSYVVMR KSMEEVLCIYYTIEMLHMVETLHDVGLIHGDFKPDNLLIRYARGDLTEDGFLDRSGSWLDQGLCLVDWGRGIDLHLFPDH TVFMGDCKTSGFRCIEMQENKPWKFQANAYGLCAVVHVMLHNSYMEIVKKESSDGSYEYHPKLPFKRYWNVELWKTFFTK MLNKYPGDDDRRLLQDLKKSFQDYMGSNPQLIKKLKELLAKQRASLCSA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SMART | 1 | 123 | 123 | 3.9E-10 | ||
| ProSiteProfiles | 4 | 161 | 158 | 31.038 | ||
| Gene3D | 7 | 163 | 157 | 6.3E-30 | – | |
| PANTHER | 13 | 215 | 203 | 2.8E-196 | ||
| PANTHER | 13 | 215 | 203 | 2.8E-196 | – | |
| Pfam | 15 | 123 | 109 | 1.7E-20 | ||
| PANTHER | 209 | 529 | 321 | 2.8E-196 | – | |
| PANTHER | 209 | 529 | 321 | 2.8E-196 | ||
| SUPERFAMILY | 223 | 502 | 280 | 9.17E-28 | ||
| Gene3D | 223 | 526 | 304 | 9.1E-93 | – | |
| SMART | 226 | 505 | 280 | 9.5E-8 | ||
| ProSiteProfiles | 226 | 529 | 304 | 15.934 | ||
| Pfam | 227 | 444 | 218 | 2.5E-10 | ||
| ProSitePatterns | 347 | 359 | 13 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. | ||
| Biological process | Mitotic spindle assembly checkpoint | A cell cycle checkpoint that delays the metaphase/anaphase transition of a mitotic nuclear division until the spindle is correctly assembled and chromosomes are attached to the spindle. |
Expression pattern of LotjaGi3g1v0452200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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