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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0455600 |
| Transcript ID | LotjaGi3g1v0455600.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Protein sel-1-like protein 1; TAIR: AT2G25570.1 binding protein; Swiss-Prot: sp|P77234|YBEQ_ECOLI Uncharacterized protein YbeQ; TrEMBL-Plants: tr|V7CGF4|V7CGF4_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0455600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:86919055..86923208) extracted from Lotus japonicus Gifu genome v1.2.
ACACCATCTCCGGCAATGTTGGCCAAGTTCATTCCGAAACCCTCCTCCATTTCTCTCTTCCGATTCAATCAACAGGTATG CATGTAAATCATGCTTTCACGAAACTACTCTCATTTTTACTTATCTCAGGGGTTTGTGAATTTTGCAGAGGGAATTGCAT AGCAGGAACAAGAAGGCCTTGGAGTATATTGCAAAAGGATGGAATGCTTTGAAGGAGGTTGATAGAGTCATCGATTATTG CGAGCTCAATGATAAACGCCTCATTCCTCAACTTAGGGTAATCAATCAATGCCTTCCTTCTCAACCCTATTGCTTTTTGC TTCTCTATTTCAGATTTTCTTATTTGAGTTTCAATTTTAGACAGCCAAGGAGAATTTTGAGCTTGCTTTGGAGGCTGACA ACACCAATACCCATGCTAGGTATTGGTTGTCTAGATTGCATATGAAATACCATGTTCCAGGAGCAAATAAAGCTGTGTAA GTCAACATTCAACTTTACATGGAATTGAGGCCCCGTTTGGAAAACAGCTTAATTAAAAGTGCTTATTGTCATAAGCTATT TTAAAAAATTTATTAAAATAAATTGAAAATAAACTATGTATAAGCATAAGCTCTTTTTCATAAGCTATCCTTAGTAGCTT ATGAAAATAAGCTCAAAACAGCTTATGGTAGGTCATAAGCTGTTTGCATAAGCTCTCCCAAACACTTGCACAAGCGCTTA TGCTATCAGGTAAGCTCAAATAAGCTCTCCCAAACGGGGCCTGAATGCTTTGATACATTGTAAATCTCAGTTTGAGGAAA TTTGATGAAGTAGCTTTCTAAGACATTGTCTGTTGTTTTTCTTTTCCCTTTTTCATTAGCAACTTTGATATAGTTTTCTG GTTTTATTGTTTAATTTTTTTTAGTGTCATTTTATTAACAGTCCCTGTTGACCGCGTGAAGGATGAACCTTACCAGTGGT GCTATATTGATATTGAGTTCTTCTTAGCTTGGTTGTTTTTCAAGTCATATAAAGATACTATTAAACCTATCTAGTATCTA GTTAGTTATCTACTGCTAATTCATGACCCGAGTTTCCTTTTTATCATGGAAACAGAGGGGCGGCATTATTGGTGGAAGCA GCAGAAATGGGTGATCCTGATGCACAATATGCACTGGGTTGTCATTTAAGAGTTGAGGTGAGGCTATGCTATGCTGTATA GTGTATACTGTGATGAGTGATGACATCATTTAAGTATGAAGATCCTGTGTTTTTTAATTTCTTTAATGAGATTTTCTGAA AATACTTTTGGAGACAGAATGACGATGTCCAATCAGATCAACAAGCTTTTTATTATTTGGAGAAAGCTGTGGACCAGGTA TTTTACCCTGTGGAATTTATATCTTGCCATGATTTCAGAATTTCTGACAAAACCTTACTGGGGTATTTTATGTTGTAGTT GCATCCAGGTGCTCTTTACCTTTTGGGGGCTGTATATTTGACAGGTGACTGTGTCAAAAAAGACATTTCTTCAGCATTGT GGTGTTTCCATAGGGCATCAGAGAAGGTAATCGGAGATATAATTAATATAACAATTAATCAAATTTAAGCCACTGGTTTT TTTTCAAGTGCTGACTCATGGTTGTGAACTTTCAACATTTTTTTCTAAAATTGGTGGATAAGTTGTCCTTTTGTTCTATT TTGTTGTGTGGCCAGTATGACATTGAGTTCAACATATAGTGGATACTGTTTGCTTACGCTGTCATGAAATCTAGTTTGCC CTTGCTCCGAAAGTGCATATCTTACCTACCTTTACAAGGTATTGGCTTGGACTGGAGTATTTTCATAAAGGAAAGCATAA GACTGTGCTTCATGAGCCATGATTTGCAAGTTTCATTGATAACTCATGCCTTGATCTGCAGTTGTTAAAATTTTGTTTGT TTGTTTGCATTTTTATCCAAATGTTACTTCTAAAACATTACACTGGTTTTTACTGAAAGTTAATGTGTGATTTAAATGAA GTGTCATGTTGTTTGATGGAATGCGTTGGCATTTGTTGCGACTTGTCTTCTAAGATGGTGGACTCAATGGCAATAGCCTA CAGTCTGAAAATTTCTGTGGAGGTTTATTACTTTATTATGCATGGTGACCTTGAAAGATATAATCGCCTAGGAGTTTGGC ATTTTTATACACCGTTTAAAATTGTAGCAAGTGATCAGTGAGGAGGTAATATTGATGACCGACATACAGAGATTTTAGCT AAATCATTATGAATGAATGATGGTGGGAGCATTTTGGTTAATTTAATGATGTATATAAGTATATGTTTCTCATGATTAGG TTTTACCTAGCTAAAGATGATGTATTTAGTTACTTTAGATGATCTACAAAATTATCTAACATGTTCGTTTAGCCAATTTT ATTACTTTAATCTTACACTTCTAAAATTTGTAATCATTATAAAGAATGCTTACACTGTAATATATGGTCCTCAGAAAGTT TATTTCCCTCTTAATCTGCAAGAATTTAACCTAATAGATTTATTGTTAGCATTATCTCCTTTGAGGTGGGAACAAGATAA AATTTGAAATACTTGCTTAAAGATTTTGTATTTGTTAATTTCGCGCTTCATATGTACGTAGGGGCATGCTGGGGCAGCTA TTGCTTATGGATCTCTTCTTCTTAAAGGTTAGGTTGTTTTTTTGTGTTCTCCATTTATTAACTAAATATTTGGTACATCA TAGCATCTGACTTGCTTTCAAAGATGAATTAGATACAAAACCTTAATTAGTACATTGGATACTATTGATACGCTGTGGGT GCATGTGTGTGTAAGAACTAGAGTTACCCTTTACAATTGATATTCCTACTCAAGTAAGAGATGATTTGCCTAACTTTTCT AAAATGAGTCAAATTGATGTATGGGAAAGGTGCATTACTCTTGAGTCTGCTACAAAGCCCCCAGAACATGGAAAAGATGA ATATAAGTTATGCTGTTGGTATAGACTATAGAGGAAAGTAATATCAAATAGGTTGGAGAAGTGGAGAGGCATGAACAATT GCAGGATCAAATTAGATTAAGCAAGCAACAACCAGAAATGGAAAGAAAAACAATAGCACATTGACATAGTTCTTAGAATT GGTCTAGCGTACTGCTTCAATCTTTTTGATAAGTAGAAGCTGAGATATACTTGTTCATAGCTTGTTTGTTACACAACCAA CAAAGCTCAACACAGCTTGTAGATAGCCAAGTCCCATTAGCATTACATGGGTTTGATCGTTGGACATCTGAATGGAAAAG ACATCGTTGGAAGGGGCAAAATCTGCTTTGTTAATTTTTACGTCTCAAGAAATTAGTCTCCAAATCTGCATTCTGAGAAT GTATCTGCTTGTGTCAAGCAATTACCGACTCGCCTTAGAAACTAGAACCTAATACCTCCTTCAAAGTTTTCTGCAAGGAT TTAGAAAATCATTAAAATCTCTAATTTTAGTGACATTGATTTCATTTGACTAAATTTAGAATTTTATTCCAGCTGTGCTT TATCATTCACTTACTCATTCTGTACAGTTATGATACTAAGAGACTAGGTTAAAATTGTTAAAAGTAAATCATTCCTTCTT GGTTATCTAAGGTGAGAATATAAATTTAAACAACCTCTGAGCTGAGACTACTCGTATATTGGAATCGAGGGAGCACCTAC CTGTTTGCATTTTAATAGATGTTGCTGCGTTTTGAATCAAGGGAAGAGTACTTCCTTTTGTTAGTGTGTTTGGATTGAGT TTGGGTATTATTAACAGAGAAGCAAACATGCTAATACAAATCGGCCTTAAAACAAACAAGCTTAGATGACTTGTTTCAAT ACTTGTTATCACTTCTGGCTGGATTTGGTGGCTTGCATATAGCTTTTCATCATCTTGTTTAGTGTCTGATATTAATAAAA AGAAAATATTGTGCCTCAGGTGTGGATATTCCAGAATCATTGGTAAAATTCAGTTTGAAGAGAGGCCAGGCTGCTCATAA ACGTGGGAAGAATAAAGAAAGTGTTAAAATTGATCCAGTAGAGATGGCAAGAGAAAAATTTCAGATAGCGGCGAAAGCAG GATGTGATCTTGGATTCAAATGGCTTGCAAGGTTAGAGGAGGAAGAGAAGCGGTTGCTCACAGAAGGGCATTGA
CDS sequence (LotjaGi3g1v0455600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTGGCCAAGTTCATTCCGAAACCCTCCTCCATTTCTCTCTTCCGATTCAATCAACAGAGGGAATTGCATAGCAGGAA CAAGAAGGCCTTGGAGTATATTGCAAAAGGATGGAATGCTTTGAAGGAGGTTGATAGAGTCATCGATTATTGCGAGCTCA ATGATAAACGCCTCATTCCTCAACTTAGGACAGCCAAGGAGAATTTTGAGCTTGCTTTGGAGGCTGACAACACCAATACC CATGCTAGGTATTGGTTGTCTAGATTGCATATGAAATACCATGTTCCAGGAGCAAATAAAGCTGTAGGGGCGGCATTATT GGTGGAAGCAGCAGAAATGGGTGATCCTGATGCACAATATGCACTGGGTTGTCATTTAAGAGTTGAGAATGACGATGTCC AATCAGATCAACAAGCTTTTTATTATTTGGAGAAAGCTGTGGACCAGTTGCATCCAGGTGCTCTTTACCTTTTGGGGGCT GTATATTTGACAGGTGACTGTGTCAAAAAAGACATTTCTTCAGCATTGTGGTGTTTCCATAGGGCATCAGAGAAGGGGCA TGCTGGGGCAGCTATTGCTTATGGATCTCTTCTTCTTAAAGGTGTGGATATTCCAGAATCATTGGTAAAATTCAGTTTGA AGAGAGGCCAGGCTGCTCATAAACGTGGGAAGAATAAAGAAAGTGTTAAAATTGATCCAGTAGAGATGGCAAGAGAAAAA TTTCAGATAGCGGCGAAAGCAGGATGTGATCTTGGATTCAAATGGCTTGCAAGGTTAGAGGAGGAAGAGAAGCGGTTGCT CACAGAAGGGCATTGA
Protein sequence (LotjaGi3g1v0455600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLAKFIPKPSSISLFRFNQQRELHSRNKKALEYIAKGWNALKEVDRVIDYCELNDKRLIPQLRTAKENFELALEADNTNT HARYWLSRLHMKYHVPGANKAVGAALLVEAAEMGDPDAQYALGCHLRVENDDVQSDQQAFYYLEKAVDQLHPGALYLLGA VYLTGDCVKKDISSALWCFHRASEKGHAGAAIAYGSLLLKGVDIPESLVKFSLKRGQAAHKRGKNKESVKIDPVEMAREK FQIAAKAGCDLGFKWLARLEEEEKRLLTEGH
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 8 | 265 | 258 | 2.6E-29 | ||
| PANTHER | 12 | 269 | 258 | 1.2E-152 | – | |
| SUPERFAMILY | 61 | 228 | 168 | 1.48E-21 | – | |
| Pfam | 116 | 149 | 34 | 0.013 | ||
| SMART | 116 | 151 | 36 | 0.0044 | ||
| SMART | 152 | 187 | 36 | 1.2E-6 | ||
| Pfam | 153 | 187 | 35 | 9.4E-7 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi3g1v0455600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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