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IPR006597

Description

IPR006597 is a Sel1-like repeat.

<p>Sel1-like repeats are tetratricopeptide repeat sequences originally identified in a Caenorhabditis elegans receptor molecule which is a key negative regulator of the Notch pathway [[cite:PUB00007970]]. Mammalian homologues have since been identified although these mainly pancreatic proteins have yet to have a function assigned.</p>

This description is obtained from EB-eye REST.

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 14

Transcript Name Description Predicted domains Domain count
PREDICTED: expansin-A20-like [Cicer arietinum] gi|502168738|ref|XP_004514456.1| 24
PREDICTED: protein sel-1 homolog 2-like [Cicer arietinum] gi|502138039|ref|XP_004503266.1| 20
PREDICTED: F-box protein At1g70590-like [Glycine max] gi|356497357|ref|XP_003517527.1| 12
PREDICTED: protein sel-1 homolog 2-like [Cicer arietinum] gi|502138039|ref|XP_004503266.1| 11
PREDICTED: probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY-like [Glycine max] gi|356500631|ref|XP_003519135.1| 19
Uncharacterized protein TCM_042415 [Theobroma cacao] gi|508725746|gb|EOY17643.1| 8
Glucose-6-phosphate isomerase; TAIR: AT5G05360.1 hypothetical protein; Swiss-Prot: sp|Q5UP92|YL018_MIMIV Putative sel1-like repeat-containing protein L18; TrEMBL-Plants: tr|A0A151RQX7|A0A151RQX7_CAJCA Uncharacterized protein; Found in the gene: LotjaGi2g1v0269600 8
F-box protein family; TAIR: AT1G70590.1 F-box family protein; Swiss-Prot: sp|Q94C27|FB84_ARATH F-box protein At1g70590; TrEMBL-Plants: tr|A0A151TGY2|A0A151TGY2_CAJCA F-box protein family; Found in the gene: LotjaGi2g1v0324500 14
Protein sel-1-like protein 1; TAIR: AT2G25570.1 binding protein; Swiss-Prot: sp|P77234|YBEQ_ECOLI Uncharacterized protein YbeQ; TrEMBL-Plants: tr|V7CGF4|V7CGF4_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0455600 7
ERAD-associated E3 ubiquitin-protein ligase component HRD3A; TAIR: AT1G18260.1 HCP-like superfamily protein; Swiss-Prot: sp|Q9LM25|HRD3A_ARATH ERAD-associated E3 ubiquitin-protein ligase component HRD3A; TrEMBL-Plants: tr|G7LE71|G7LE71_MEDTR Sel1 repeat protein; Found in the gene: LotjaGi4g1v0464700 16
ERAD-associated E3 ubiquitin-protein ligase component HRD3A; TAIR: AT1G18260.1 HCP-like superfamily protein; Swiss-Prot: sp|Q9LM25|HRD3A_ARATH ERAD-associated E3 ubiquitin-protein ligase component HRD3A; TrEMBL-Plants: tr|G7LE71|G7LE71_MEDTR Sel1 repeat protein; Found in the gene: LotjaGi4g1v0464700 18
Photosystem I assembly protein Ycf3; TAIR: AT3G11540.1 Tetratricopeptide repeat (TPR)-like superfamily protein; Swiss-Prot: sp|O82039|SPY_PETHY Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY; TrEMBL-Plants: tr|A0A151U3N8|A0A151U3N8_CAJCA Putative UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY; Found in the gene: LotjaGi5g1v0099700 21
Photosystem I assembly protein Ycf3; TAIR: AT3G11540.1 Tetratricopeptide repeat (TPR)-like superfamily protein; Swiss-Prot: sp|O82039|SPY_PETHY Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY; TrEMBL-Plants: tr|A0A151U3N8|A0A151U3N8_CAJCA Putative UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY; Found in the gene: LotjaGi5g1v0099700 20
Photosystem I assembly protein Ycf3; TAIR: AT3G11540.1 Tetratricopeptide repeat (TPR)-like superfamily protein; Swiss-Prot: sp|O82039|SPY_PETHY Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY; TrEMBL-Plants: tr|A0A151U3N8|A0A151U3N8_CAJCA Putative UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY; Found in the gene: LotjaGi5g1v0099700 21

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
mobidb-lite MobiDBLite 1 7.14