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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0462800 |
| Transcript ID | LotjaGi3g1v0462800.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Terpene synthase; TAIR: AT3G25820.1 terpene synthase-like sequence-1,8-cineole; Swiss-Prot: sp|Q672F7|TPS2_LOTJA Tricyclene synthase EBOS, chloroplastic; TrEMBL-Plants: tr|I1LRT2|I1LRT2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0462800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:87786944..87790523) extracted from Lotus japonicus Gifu genome v1.2.
AACACTTCAATATCCATAGTTGTGAGCATATAATAATGGCCCAGAGCTTTTCCATGGTGCTCAATTCGTCCTTCACTTCA CATCCTATTTTTTGCAAACCTCAAAAGCTAATTATAAGAGGGCATAATCTACTTCAAGGGCACAGAATTAATTCCCCAAT TCCATGCTATGCAAGCACTAGCAGCACAAGTGTGTCACAAAGAAAATCAGCCAATTACCAACCTAACATTTGGAATTACG ATTATTTGCAGTCCTTAAAGCTTGGTTATGCGGTAATTAAATAATCGATCTTCATTGCATAATGTCTTTGATTAATAAAT AGATTTATCACATTTCAATGTATTTATAATTTTATGACATGTGATTTGCTTTATGTGTTACATTTGCAGGATGCACATTA TGAGGATATGGCTAAAAAGTTGCAAGAGGAAGTGAGAAGAATAATTAAGGATGACAAAGCAGAGATTTGGACTACACTAG AGCTTATTGATGATGTGAAACGCTTGGGTCTTGGCTATCACTTTGAAAAGGAGATAAGAGAGGTTCTTAACAAGTTTCTA TCTTTGAACACATGTGTTCATAGAAGCTTGGATAAGACTGCTCTATGCTTTAGGCTCTTGAGAGAATACGGCTCCGATGT ATCAGCAGGTATATATAAATACGGAGCAGCAGTTTAGCGCATTGTTATTGTTTAGCGCTCACCACATGTTCGGGTCGCAC AATACTATCGAATTGATGCAAATTAACCATGAAAATAGCAAATTAGCAGTTATACATGATATACACATGTAGGAGTAGTG CCTTTATTTAGTTAGCAAAGTACAATTGAATTTTGAAAATTAATTCATGTATTTCATCATGTAGATATTTTTGAGAGATT CTTGGACCAAAATGGTAATTTCAAGACAAGTCTTGTCAATAATGTAAAAGGAATGTTGAGTCTCTATGAGGCATCATTTC TTTCTTATGAAGGAGAACAGATTTTGGATAAGGCCAATGCTTTCACTAGCTTTCATCTCAAGAGCATCCATGAAGAAGAT ATAAATAACATTCTCTTAGAACAAGTGAATCATGCATTGGAGCTTCCACTACATCGTCGTATCCACAGGCTTGAGGCCCG GTGGTACACTGAGTCATATTCAAGAAGAAAGGATGCAAATTGGGTGTTGCTTGAAGCAGCTAAACTGGATTTCAACATGG TTCAATCAACACTGCAAAAAGATCTCCAAGAAATGTCAAGGTAGGTTAATTTCTTGAGGTTTTTTTTAAGCATTTCTTGA ATAAAAAAAACTTCGAGATTGGCCACAATTAGGATATTGAAAAAGTCAAATTAATTAATTTCTTCCAACAATTTATCCAA CAAAATCAATTCATAATTATTTACATATATTTGTACATATTATGCTGAGATTTTTTTCATTGGTCTAATGAAGGTGGTGG AAGGGGATGGGGCTTGCCCCAAAGTTAAGCTTCAGTCGTGATAGATTAATGGAGTGCTTCTTTTGGACGGTTGGGATGGC TTTTGAGCCAAAATACAGTGATCTTCGCAAAGGTTTAACCAAAGTCACCTCTTTAATAACTACAATTGATGACATTTATG ATGTGCATGGAACCTTGGAAGAATTAGAGCTTTTCACAGCAATTGTGGAAAGGTAATTTCTTGTTCATTAATTTACTTAT TATAAAGTGTATTATATTCCTCAAGTTATTGCTGATGGTTAAAAATGTTGCTGAATTGGTGACATTGTGAATTGATTCAT TGATTACAAATGGTGTTACTTTCAGTTGGGACATTAAAGCAATGCAAGTTCTCCCAGAATACATGAAGATAAGCTTCTTA GCCCTCTACAACACAGTCAATGAATTGGCTTATGATGCACTTAGAGAACAAGGGCATGATATCCTACCCTACCTCACTAA AGCAGTAAGTGCTAAAACCATAATCATTATGTATATAGTAGAATTTAGATGTCCTTAAGTTTTAATTTGAATTGTACAAA AAAAAAATTCAGTAGTCAAGCCTACAATGAATTTTGAGAATTCAAACACAAAAGGAAAAATAGAGTAACAATATAATGCA CTTAAATCTACTTTCAAATTTTCACAGTACTCTAGCACCGAACACTAAGCTCAACTACAAATATTCACTTTTCTTCTATT TTAATTTTTTTAAAAAAATTGGAAAAGGGGAGACTACAATTCATGAGACACATGTCAATTTGTGAATAGAGGGAGTACAT ACTACAATAGTATTGTGAATTAAGTTAGTTTTACCGGGATGTAGATGAATCATACTCGAATTGAATTGTCTCTTGTGGAG CATAATTGTCTTATGACAAAAAAGTCAACTTTAATTAATAATACAATAATTAATTTTAATTTTTGTGTGTTAATGCTAAA TTATGAACTACTATTTTTTTATGTGGTTTTTCGATTCAATTGCAGTGGTCTGATATGTTGAAAGCTTTCCTACAAGAAGC AAAGTGGTGCCGAGAAAAACACTTGCCAAAATTTGAGCATTATCTCAATAATGCTTGGGTCTCAGTGTCTGGTGTAGTTA TACTAACTCATGCCTATTTCTTGCTGAATCACAACACAACAAAGGAGGTACTTGAGGCCTTGGAAAATTACCATGCTCTG TTCAAAAGACCATCCATAATTTTTCGACTTTGCAATGATTTGGGTACATCAACGGTAATTCTGGGCAACCTAATCATACA CTCTCTGATTCTTATTACAACATTATCATGCATGACATGCCAATAATAAAAATTGATTTGTGAACTACTCATTTTTGTCC GGCATCCAGGTACATGTAGTTTGTGGTTGTTTCTACTGCAATTTTTGACAATAAAAAAACGCCACAAACTGCAGGTGTCT GAGTGTCTGCCAGAAAAACAATGGTCCACAAATCAGCACTCTGCAAGTAATAAACTATAAATTTTAAGTTAAATTGAGAC AATTAAGATCATCCAAGAGTTAATTAATTAGTTTTTTTTTATATTTTGTAGGCGGAGTTACAGAGAGGTGAAGTAGCAAA TTCAATTTTATCCTGCATGCATGAAAATGATATTGGTGAAGAGAGTGCTCACCAACACATTCATAGTTTGCTTAATGAAA CTTGGAAGAAGATGAATAGAGATAGGTTCATCCACTCACCTTTCCCAGAACCTTTTGTGGAAATAGCAACCAACCTAGCC AGAATTGCTCAGTGTACGTACCAAACTGGAGATGGGCATGGAGCCCCGGATAGTATAGCAAAGAATCGAGTCAAATCATT GATAATTGAACCCATTGTTCTCAATGGAGACATATATTAATCGCAAAGATATAGAAAATATGACTGTACATAATGCCAAA GATGAATATTGGCATGTCATATGTTAGTGTAGGTATAATTGAACGTATAGTTTTCTATAATTGATTTTATTACGTTAATT TTCAATGTTTCAACATTTTGATTGTGTTTGCAATGAATTTGGAATACAATGTAGTTAAGTTCAAAAAAAATGTATATTGT AATCTATAAACATCGTCATGGAAATTTCTATCCATGTCTACCTAGTTTTGTACATAATTG
CDS sequence (LotjaGi3g1v0462800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCCCAGAGCTTTTCCATGGTGCTCAATTCGTCCTTCACTTCACATCCTATTTTTTGCAAACCTCAAAAGCTAATTAT AAGAGGGCATAATCTACTTCAAGGGCACAGAATTAATTCCCCAATTCCATGCTATGCAAGCACTAGCAGCACAAGTGTGT CACAAAGAAAATCAGCCAATTACCAACCTAACATTTGGAATTACGATTATTTGCAGTCCTTAAAGCTTGGTTATGCGGAT GCACATTATGAGGATATGGCTAAAAAGTTGCAAGAGGAAGTGAGAAGAATAATTAAGGATGACAAAGCAGAGATTTGGAC TACACTAGAGCTTATTGATGATGTGAAACGCTTGGGTCTTGGCTATCACTTTGAAAAGGAGATAAGAGAGGTTCTTAACA AGTTTCTATCTTTGAACACATGTGTTCATAGAAGCTTGGATAAGACTGCTCTATGCTTTAGGCTCTTGAGAGAATACGGC TCCGATGTATCAGCAGATATTTTTGAGAGATTCTTGGACCAAAATGGTAATTTCAAGACAAGTCTTGTCAATAATGTAAA AGGAATGTTGAGTCTCTATGAGGCATCATTTCTTTCTTATGAAGGAGAACAGATTTTGGATAAGGCCAATGCTTTCACTA GCTTTCATCTCAAGAGCATCCATGAAGAAGATATAAATAACATTCTCTTAGAACAAGTGAATCATGCATTGGAGCTTCCA CTACATCGTCGTATCCACAGGCTTGAGGCCCGGTGGTACACTGAGTCATATTCAAGAAGAAAGGATGCAAATTGGGTGTT GCTTGAAGCAGCTAAACTGGATTTCAACATGGTTCAATCAACACTGCAAAAAGATCTCCAAGAAATGTCAAGGTGGTGGA AGGGGATGGGGCTTGCCCCAAAGTTAAGCTTCAGTCGTGATAGATTAATGGAGTGCTTCTTTTGGACGGTTGGGATGGCT TTTGAGCCAAAATACAGTGATCTTCGCAAAGGTTTAACCAAAGTCACCTCTTTAATAACTACAATTGATGACATTTATGA TGTGCATGGAACCTTGGAAGAATTAGAGCTTTTCACAGCAATTGTGGAAAGTTGGGACATTAAAGCAATGCAAGTTCTCC CAGAATACATGAAGATAAGCTTCTTAGCCCTCTACAACACAGTCAATGAATTGGCTTATGATGCACTTAGAGAACAAGGG CATGATATCCTACCCTACCTCACTAAAGCATGGTCTGATATGTTGAAAGCTTTCCTACAAGAAGCAAAGTGGTGCCGAGA AAAACACTTGCCAAAATTTGAGCATTATCTCAATAATGCTTGGGTCTCAGTGTCTGGTGTAGTTATACTAACTCATGCCT ATTTCTTGCTGAATCACAACACAACAAAGGAGGTACTTGAGGCCTTGGAAAATTACCATGCTCTGTTCAAAAGACCATCC ATAATTTTTCGACTTTGCAATGATTTGGGTACATCAACGGCGGAGTTACAGAGAGGTGAAGTAGCAAATTCAATTTTATC CTGCATGCATGAAAATGATATTGGTGAAGAGAGTGCTCACCAACACATTCATAGTTTGCTTAATGAAACTTGGAAGAAGA TGAATAGAGATAGGTTCATCCACTCACCTTTCCCAGAACCTTTTGTGGAAATAGCAACCAACCTAGCCAGAATTGCTCAG TGTACGTACCAAACTGGAGATGGGCATGGAGCCCCGGATAGTATAGCAAAGAATCGAGTCAAATCATTGATAATTGAACC CATTGTTCTCAATGGAGACATATATTAA
Protein sequence (LotjaGi3g1v0462800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAQSFSMVLNSSFTSHPIFCKPQKLIIRGHNLLQGHRINSPIPCYASTSSTSVSQRKSANYQPNIWNYDYLQSLKLGYAD AHYEDMAKKLQEEVRRIIKDDKAEIWTTLELIDDVKRLGLGYHFEKEIREVLNKFLSLNTCVHRSLDKTALCFRLLREYG SDVSADIFERFLDQNGNFKTSLVNNVKGMLSLYEASFLSYEGEQILDKANAFTSFHLKSIHEEDINNILLEQVNHALELP LHRRIHRLEARWYTESYSRRKDANWVLLEAAKLDFNMVQSTLQKDLQEMSRWWKGMGLAPKLSFSRDRLMECFFWTVGMA FEPKYSDLRKGLTKVTSLITTIDDIYDVHGTLEELELFTAIVESWDIKAMQVLPEYMKISFLALYNTVNELAYDALREQG HDILPYLTKAWSDMLKAFLQEAKWCREKHLPKFEHYLNNAWVSVSGVVILTHAYFLLNHNTTKEVLEALENYHALFKRPS IIFRLCNDLGTSTAELQRGEVANSILSCMHENDIGEESAHQHIHSLLNETWKKMNRDRFIHSPFPEPFVEIATNLARIAQ CTYQTGDGHGAPDSIAKNRVKSLIIEPIVLNGDIY
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 55 | 589 | 535 | 8.7E-201 | – | |
| PANTHER | 55 | 589 | 535 | 8.7E-201 | – | |
| CDD | 56 | 587 | 532 | 0.0 | – | |
| SUPERFAMILY | 62 | 262 | 201 | 1.57E-62 | ||
| Pfam | 65 | 237 | 173 | 1.6E-50 | ||
| Gene3D | 81 | 277 | 197 | 1.2E-68 | ||
| SFLD | 264 | 589 | 326 | 0.0 | ||
| SUPERFAMILY | 264 | 588 | 325 | 1.12E-104 | ||
| SFLD | 264 | 589 | 326 | 0.0 | – | |
| Pfam | 268 | 533 | 266 | 4.3E-98 | ||
| Gene3D | 278 | 591 | 314 | 1.7E-129 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Magnesium ion binding | Interacting selectively and non-covalently with magnesium (Mg) ions. | ||
| Molecular function | Terpene synthase activity | Catalysis of the formation of cyclic terpenes through the cyclization of linear terpenes (e.g. isopentenyl-PP, geranyl-PP, farnesyl-PP and geranylgeranyl-PP) containing varying numbers of isoprene units. | ||
| Molecular function | Lyase activity | Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring. |
Expression pattern of LotjaGi3g1v0462800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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