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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0465500 |
| Transcript ID | LotjaGi3g1v0465500.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Ras-related GTP-binding family protein; TAIR: AT3G21700.3 Ras-related small GTP-binding family protein; Swiss-Prot: sp|P87027|SPG1_SCHPO Septum-promoting GTP-binding protein 1; TrEMBL-Plants: tr|G7JDG8|G7JDG8_MEDTR Septum-promoting GTP-binding-like protein; Found in the gene: LotjaGi3g1v0465500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:88088068..88092279) extracted from Lotus japonicus Gifu genome v1.2.
CTGAAACATGTGAAATGAAATCCCCAAAATACCCTCAACATTTTCAAAACCATGATAATACTACTTGACACACCCTCACT TTTGTTTTTCATGGCCTAAGTGTTTGCTCTTGTGTTGTGGCCATCCACATTCCATTCTCATTTCTCACACTCTCTCTATC TCACTTTTCCTTAATTTCTCAGAAACAAAAATAAAAACATAACATGCCTCAGTTATGCCGGGAAGTTGGTAACTCCACCA CGCTCCGGCGGCGGTTTCACCACCGTGTCTCGTTGCTCCGGCGATGTATCCTCCGTGTCCTCCACCATTTTCTTGTCTGC TCTGGGAGGAAGCCTACCAATGCTGCCTATAGGATGCTGCATCCGCATGTGGCATTGCCTTCTCCGTCGCCGCCGCCGGA TTTTTCTGCTGTTGAGGCTGGCCTTGGAGGGGTGCTGGTTGCGCCTCCGCCTGTGTTTCATACTCATGATTTTGAATCTG ATTTGGTTTCCCTCAAAATCAGCTTGTTGGGTGACTGCCAAATCGGAAAAACCAGCTTTTTGGTTAGTTTATATTATCAC ACAAGCAACCATTTTTTTTTTTGCCCTGTTTAATTTAATCTGAAAATGGGTTGATTCAGAAAATGATTTTTTGTTGTTAT GATTTGAATTTAATTGTTGGGTTTTGTTTTGATTTGATTTTTCAGGTGAAGTATGTTGGGGATGAAAAAGAGCAGGGAGA ATTGCAGAGGAAAGGGCTAAATCAGATGGACAAAACTTTGGTTGTGGAAGGGGCACGTATATCCTATTGTATCTGGGAAG TACAAGGTAGTGAGAGAAAATCTCAGATTGTTTTTTATGATTTTGGGATTGTTTATGATAGAAAGGTAATGATCACTGAT TGTTGATTGTTTATGTGATTATTGTGTATGCAGGGGATGGAAAAACAGATGACCAAATGCCAATTGCTTGCAAGGACTCT GTGGCAATTTTGATTATGTTTGATCTAACAAGTCGATGCACATTAAACAGGTACCTCATTTACTATATAAACTAATTCAG ATTATTGCTTTTCTAGTAGCTAATTGGGATTACTAATCAAAGAAAGAATTTTCCACCATTTTATTTCTGGGATTTGTGTT TTGATTGCTGGTGTTTGATTTCAGTGTTCTGGGATGGTACAAAGAAGCAAGGAAATGGAATCAGGTACACACATGTCATT TGGTACTAATATGTGATTATACATGATTGTAGCATGTGGATGCAGAGGTGTAATTAAGGATTTGAGAGTGATGTGTGTTT AATTTTTGTAGACTGCAATTCCAGTGTTGATAGGAACCAAATTTGATGATTTCATTCAGCTCCCAATTGATCTGCAATGG ACCATCGCCAGTGAGGTAATGATTCATCCATCACCAATTTACTATTACAAGTACACAGTTCAAGCATGATCTTCCTTACA AAAGAAACAAGGGTATGATCTTGGTAGTATAATTGGTTTGACAATTATTTTTCTTTACAAAGAAAAATTGCATTCTGTTA GTGACTTCAATTGCTTTTATTCCTAATCATGTTTTAGGAAAAAATATCAGAAAAACTAAAGTTGATCACAACTTGTACCA ATACCCACGTTTTGTATGAAAACAACCACCATCTAACAGTCCAAAAGGTGTGGAGGGGGATTCTAGCTAGGGGTGTTCGC GGATTGGATTGGATCGGTTTTGAGGAGAAAAATCATCCGATCCGATCTCATCGGTTTTATGATTTTGTCATCCAATGGAT TTTTTACTAAATTCAAATCCGAACCAATCCGATTCAATCTATAGCGGTTTGGATTGGATTGGATTGTTCGGTTTTTGTTT CACTTTTTTATACTTTGAAATTGTGTTGTATAAATTTTAAAAATATATAATATATGATAAATACAATGATACAATTTATA ACATTAATATAACATTCATAAATTATAACATAGTCAACATATTTTAAAATTATGATTATAATTGTTTACTTTGATGCATG TATATAGTAAATTTTGATGCATGTGTGATATAATCAATATATATACAATAAATATGTACTATGTAAGTGTAAATGGAATG ATATATGTATAACTAAAAGTATACATTTTTGTGAATGTTCGGTTTGGATTGGATTGGTTCGGTTTTGGAAATCAAATCCG AAATCCGATCCGATCCAATAAATAATTTCGGTTTTTTCAATTTTCAGTCCGTTCGGTTTTCGGTTTGATTGGATTTCAGT TTTTTTGGATCGGTTTGTCGGTTTTGTTTGGATTGGTTCGGTTATGAATAGCCCTGATTCTAGCCCAAGACATGAATGCC TTAGAATCCTATAGAATGATCTATTCAGAAGACTAATCAATTTTGTACATGTTTTCCTGAGAAAAGATAGATAAAGGACC AAGAAACTTTTTTGTTGATGCTTTTAAAATTATCTATTTTTGTTTTCCATTCTTATGATTAAGCTCCTACCAACTATTTA TAAATGTTTCTTTTCGGTTGCAAAGTCTCTTCAAGTGAAAGGGATTGATGAGATTTCTTTAGACATTACTTGCTGACACT ATTAATTTCCTTGTAGGGTAGGCATGTTAAAGATAATGTTAATTGTGTGAGACCAAGTATAATCACACACGTGCATAAAG CATAATATATAAATTTGGACCCCTTGTAAATTGTAAATGAATGAGTGAATAACCAAACTCATCCCTCAAAGATTAGGCGA TCAGCAAGTTAGTCAGAAGGAAATACCTAAAAAATCTTTTTTTATGTTATGTCAATTGTCTAGTATATAGAAACTAATTT GATTGACATTTTATCTGACAATAAGGATTAACTCGAACGATGATTTACTAATTCAAGGATCGTTACTTATATGTATTTTT CTTCTTTTAGAGACTAACTTCCCTAACACTTACACTCTTTTATAGATGAATTTGACTTTTTTGCACTATTTAGGTGTCTA GTATTATTATTGTTATATTTTATTTTATTTTGTTAAATGTGGACCCCATTTTCCACCATAAGAATACAGACACTGCATGT TTGATGAAATTGAACAAGGCAAACAAGCCCACTCACACCCCCATGCCCATTTGTTTGCTAGCAAACCAAGACATGTTACT AATGTGTTGAGCTTTGAAACATGTCATTTTTTTCATGTCATTCAAGATAAGATTTGATTTGATTTTTATGTAACAGGCAA GAACATATGCAAAGGCCCTCAATGCCACTCTATTCTTTTCCAGTGCAACTTACAACATCAATGTGAACAAGATCTTCAAG TTCATCACTGCGAAGCTCTTTGACCTGCCATGGACAGTGGAAAGGAATCTAACTGTTGGGGAGCCCATCATTGATTTCTG AACTGTAGATTACATGATAGCACATATGTTTTTGTTGCTTCAAAGTGTTCAAAAGTCAACCGGGTCACAAGATGTTAGTC AACCTCACACTCTTGGGGCGATCGAGTTGTTAGATTTAAACATGTCACTTCCGATGAGGAATAAAATGCAAGTGACAAAT AAAAGAAATGGAAAATGCAGGAGAGGACTAAGGTTACCAGCATATAAAAAGCAGAGCTTGTGCATCATTGAGTACATAAA TTAGTCAATGATGTTCTTGTCTTGCTATGGAGGAATTGCTCTTTGAAGTGTCAAAAGTACTTAGAAAATGAGATGATGAG GTCTCTTAGCATGTTTGTTTGAATCAGTTTCTATTTCTTCAGAATTAATTCGAACATTCAAAAACTACTCCTGGAAAAAG GATTTTCAAAGACACTTTAAATATTTAGCAGAGTAAACCTTGTACGGAATCTCCTTTTATTTCCTTTTAATTTCTCACCC AGTTTTGAAGTTCTGGTAATCAAAAGCTTCTTCTGAATAAATAAATCATTTCACATTAGTTTTCATTGTTTCTGTCGCTC TCGGCTTAGATATTTTTGGATTGATAGAATTCTGTTCAACCGAACCTCACACTACTCATGGGATTTGGATCCTCTCCATC CAGCTTCTCTCCATCCTCTCTCCATCCAAATCTGAGCCATTGATTTAGAAATTTAAAGGCTTGGATCAATTTAAGAAGAG AGAGAAAAAATGAATTGTATTTAAAGGCTTGAATCAATTTAAGAAGAGAGAGAAAACATGAACTAATCCTCACCTTTAAA ATTCAAAATCAATGGCTCAGATTTTAGATGGAGAGGGGATGGAGAGAAGCTG
CDS sequence (LotjaGi3g1v0465500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCCTCAGTTATGCCGGGAAGTTGGTAACTCCACCACGCTCCGGCGGCGGTTTCACCACCGTGTCTCGTTGCTCCGGCG ATGTATCCTCCGTGTCCTCCACCATTTTCTTGTCTGCTCTGGGAGGAAGCCTACCAATGCTGCCTATAGGATGCTGCATC CGCATGTGGCATTGCCTTCTCCGTCGCCGCCGCCGGATTTTTCTGCTGTTGAGGCTGGCCTTGGAGGGGTGCTGGTTGCG CCTCCGCCTGTGTTTCATACTCATGATTTTGAATCTGATTTGGTTTCCCTCAAAATCAGCTTGTTGGGTGACTGCCAAAT CGGAAAAACCAGCTTTTTGGTGAAGTATGTTGGGGATGAAAAAGAGCAGGGAGAATTGCAGAGGAAAGGGCTAAATCAGA TGGACAAAACTTTGGTTGTGGAAGGGGCACGTATATCCTATTGTATCTGGGAAGTACAAGGGGATGGAAAAACAGATGAC CAAATGCCAATTGCTTGCAAGGACTCTGTGGCAATTTTGATTATGTTTGATCTAACAAGTCGATGCACATTAAACAGTGT TCTGGGATGGTACAAAGAAGCAAGGAAATGGAATCAGACTGCAATTCCAGTGTTGATAGGAACCAAATTTGATGATTTCA TTCAGCTCCCAATTGATCTGCAATGGACCATCGCCAGTGAGGCAAGAACATATGCAAAGGCCCTCAATGCCACTCTATTC TTTTCCAGTGCAACTTACAACATCAATGTGAACAAGATCTTCAAGTTCATCACTGCGAAGCTCTTTGACCTGCCATGGAC AGTGGAAAGGAATCTAACTGTTGGGGAGCCCATCATTGATTTCTGA
Protein sequence (LotjaGi3g1v0465500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MPQLCREVGNSTTLRRRFHHRVSLLRRCILRVLHHFLVCSGRKPTNAAYRMLHPHVALPSPSPPPDFSAVEAGLGGVLVA PPPVFHTHDFESDLVSLKISLLGDCQIGKTSFLVKYVGDEKEQGELQRKGLNQMDKTLVVEGARISYCIWEVQGDGKTDD QMPIACKDSVAILIMFDLTSRCTLNSVLGWYKEARKWNQTAIPVLIGTKFDDFIQLPIDLQWTIASEARTYAKALNATLF FSSATYNINVNKIFKFITAKLFDLPWTVERNLTVGEPIIDF
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 71 | 272 | 202 | 7.4E-81 | – | |
| PANTHER | 71 | 272 | 202 | 7.4E-81 | – | |
| Gene3D | 87 | 263 | 177 | 5.9E-26 | – | |
| ProSiteProfiles | 91 | 281 | 191 | 10.97 | – | |
| CDD | 97 | 278 | 182 | 6.4972E-111 | ||
| SMART | 97 | 264 | 168 | 7.2E-5 | – | |
| PRINTS | 97 | 118 | 22 | 5.9E-10 | – | |
| SUPERFAMILY | 97 | 272 | 176 | 4.94E-28 | ||
| Pfam | 98 | 261 | 164 | 4.0E-19 | ||
| SMART | 99 | 263 | 165 | 0.0067 | – | |
| PRINTS | 138 | 160 | 23 | 5.9E-10 | – | |
| PRINTS | 199 | 212 | 14 | 5.9E-10 | – | |
| PRINTS | 239 | 261 | 23 | 5.9E-10 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | GTPase activity | Catalysis of the reaction: GTP + H2O = GDP + phosphate. | ||
| Molecular function | GTP binding | Interacting selectively and non-covalently with GTP, guanosine triphosphate. |
Expression pattern of LotjaGi3g1v0465500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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