Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0466400 |
| Transcript ID | LotjaGi3g1v0466400.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; TAIR: AT2G39290.1 phosphatidylglycerolphosphate synthase 1; Swiss-Prot: sp|O80952|PGPS1_ARATH CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 1, chloroplastic; TrEMBL-Plants: tr|K7MVM8|K7MVM8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0466400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:88176528..88183765) extracted from Lotus japonicus Gifu genome v1.2.
AGTTTTTTCACCTGACCCCACCCCACCCCAGCCATCCCCACTAACATCATTCATAACCTAACGCTCTCTCTCTCTCTGTC TCTGCTTTTCCAGTTTCACGTTTGAAACAAAATCCTCCATCCACAACATAAGATAGAATCAATCGTGTGATTGTGTTCCA ATTCGAAATCAGGGTTGTTTGGTTGGTTGTGATGTTGGTGAAGAAGCTCTGGATCCGCATCACATGAAAACCATGGTTTC CGATGCCAACTCCAAGATTTCCATGCCTTCTTCTTCCCATTCCAAAATCCTCACTCTTCCCACCATTCTCACTCTCGGCC GTGTCGCTGCAATCCCTCTTCTCGTTGCCAGTACGCTCTCTCTCGCTCCTTTTACCTTTCGATCATTCATTGTTGTAATT CAATTCTTTGTAATTTGCATTTTGTTTTACCAATTCGCAAATCTACATGTTACAGATTCTTGATGCTAGCTCAATATCTA ATACATTGATTGATTGGTTTATCTGATCAAATGATTTTCATGTTTTGTTTTGTTCAGCCTTCTACATGGATGGTTGGCAA GGAACTGCTATTACCACAACCGTTTTCACCGCCGCAGCAGTTACAGATTGGCTTGATGGCTTCATTGCTCGCAAGGTTTG CACTAACCTTGCCGACATTCCCAATCTTCAACTTTATTTATTTATTCAAGAGTTTTCTCTTAAATGCAGATGAAATTAAA ATCAACATTTGGTGCTTTTTTAGATCCAGTAGCTGACAAGGTAGTTTTTCTCTTTTCTTTTTGCTATTAGTTGTTCTTAG TGATGTATTATTACTGAAAATTGAATGATGCAGCTTATGGTTGCTTCCACGTTGGTCTTATTATGTACTAGACCTTTGAA AGTTGCTCTGTTAGGACAAGCGCCGTGGCTCTTGATTATACCTTCAATCACTATAATTGGTCGAGAGGTAATGCAATTTT CAAGAGCTTTATCAATTTGAACATTTTATTCTCAATGTGATTTAAACTTGTGTTTCTCAATTCTTTTACATTTCCTTACT TTTTCGTGTATTTAGTCCATCATTTTAGCTTGTTAAATGTGTTTGTGCTATAAATTTTGCTAAGGACTGGGTTCCGGTGA CTCTCGTGGACTCCAAATTAACTCTTGAAATCACCCGAGTGTTTAAATCACCTGGCTTGATGAAAACCATGTAAATCCAA TGTTTTATATATGAATTGCATGATCATGAGTGTGTGAATTTGGGATCCCTTTTGGTTGTTGCCCTCTAACTCGCATGGTA TGACCATTGAGATTTGAGACTACCTGCAGCTCTGGGGATGGAATCAACGAGGTCCAGGGAATGGGTAAAAACTCTTGTCT GTGGTTTGTGCTATGGTGTAGAACCGCAACTGATGTGTATAAACCTCTACCATACGCCCTAAATTGAGGATAAACTGGAA TGCATCACCACAAATACTTCAGATTTGACCCTTATTTTCTCTAAGGTTTTTCAATGAGGATGTTGTTTATGATGATGCTT CTGAACAAATCTGACTTTGTTCAAACTTCAAAGCATTCTTCTATTCAAGGTGCATTGAAATTTACACTGTTGATACCATC TGGACAGGGCTCTTTAGATTTAGTATTCCGTATTATTTGCTTGCTTGCTTGGTTGCATTTGTGCATATTTGCTTGCGTGT GTGCAATCATACTTGTTTACTTGAGATTCTAATTTATGTAGCCCCTCTCTTTGCTCTTCCTTTCACGCTTCATACCTTGT CTTCTATCCTCACTTTGTAGTAGAATTGACTATTGAGAGGAGATGTCTTAGTACTTCTTTTTGTAACTTGCTAAATAGAT AACCATGTCGGCACTCAGAGAATGGGCTGCTTCTCAGAGTAGTAAGCTTCTAGAGGTTTGTTTGCCTCCTGTTAACTTGA GTCAATTTCCTGTTCCATATACAAAATTTTGAGCTTACACAATAAAACTAAAAATAATAGGCTGTTGGCGTTAATAATTT GGGGAAATGGAAAACAGCTACTCAGATGATCGCGTTAACCACCCTCCTCGCTACCCGTGACTGCAGGTACTTGTTTTCTT TGCAATCTGAGGAAGCTCTGTTGCTTGTTATGAAAAGTAAAACTGTTGAACTGTCTTCATTTGACATATATGATGGAATT CTCTTTTTTTCAGTGGCGGAGGAGCTGCCATTTTGGTATACTTGGGTGTGGTCTTGCTTTATATTGCAGCAGGGCTTGCT ATATGGTCGTTTGTAATATATATGACGAAAATATCGAAGGTGTTGCTGAGGTAGCGTGGTTGATAGCTCTCTGGTTTCAC ATATATACACTTCTTTGGTGGGTTTGATTCTCATGATCATTTCTTATACACACAGTTAAGTTAGCGATGCCATGGTAGGG AGATGCAGTCTTTGTGACATATATCTGCAATGTCCACCCTCCAGAACTCTGCACAGCATCATTCCTCCTAGTTTTTCAAA TTGTATGCAGAATTTTTTTCCCTTTGTTACCCCAGGTAAAGGAATGAAGAAAAGAAAGCAAAGGATGACACTCAGGATTA AATTGGAAGAAATTAGTTTATTAGTTTATTATTCACGGTTGAAGGATGTAGCAGTAGATATCCCTTTTGGGGTCTAATTC CTAACTATAGTCTGGAGCCTTTGGAAGTCTGCCACCTGATAAATTTCACTACAGGAAATATTTTATGGCTGTAGTTGACT CTTCAATTATTTTGTCTGTGCCACCTGAGAAATTTCACTACAGGAAATATTTTATGCTTGTAGTGGACTCTTAAATTATT TTTGTTCGTGTCATATTCTTTAACTATGCTTGATGTGTGTAGAATTCAAGAGTATCAAATTCAAGTCATCCAAATGATCA CAGTGAAAGATGTATGTAAAATCATAAAATTTGAAAATAAGATTTACACCCTAATAGTGCATGGACTATACAACCTTCAA AAGGATCTACTAATAAATTTCCAATCTCAGTCAGGAATAATTGGCTGAATTAGGGGGAGCTGCCATTTTTTCTTAGCTAG ACTTAAAATCCGGGTATAATTAGATTCATATGAAGGAGAGAACACAAATAAGGCAACATTTCAAACACATGAAAGGCTCC TCTTAGTCATTAGGAGCCTTTCTACATTTGAATCACTTATTAATGATATTTTTCATCCCTATGTAGGAAGTATATCCCAG TATATAAATGATTTTCCAATTTATACATCAGATCAAAGTGCTCATCTAGCCATTTGAAGAGAATGTTTGAAGTTCATGGA AGCAATTCCTTATGGGAATGGGAGGACTAAAGGAAATGTTGTCTTAGGGCTGCAACTCCATGTTATTTTGTGAGATTGCA TTAGCATGTGTACCGAATATTAGCAGTTCAACGAGTAAGGGAGTGCTCTGTTGTGTAGCCAGGGTTTGTTTGTTTTTTGT TACAATGTTGTTTCATGCAGGATTTCCAATTTTTGAGGCACATTTAGCAAATAGAATTAACTTGTTTTTTTACCCTACGT CCGTTTACATTCAGTGGATAACCATTCATACGAACTAAGCTCTTATTTGATAAATCTCAAATCTCAAATATTTTCAAGAT TAGCTCCATGCTCCAAGCTCATTTTTGCCCTATAACAGTAAAGAGGAATGGATGTTCAATAATTAAAGAATAAAAGCACT ACAAAAACACACACTTACTCTAAACTTACATTAAACATCAAATATGACAAGTCGTACCATTTTCACATATTTTCTATTCT TAGAACTCTAGTTCACTCAAAGCTACTATCCACAGTTTAAATCATATCTAACATTAATTATTCTTTAAAAAAAAACATTA ATTATTAATTCTAACAAGGTGGAAGCTTGGAAGAAGTAGCCTAATTTTCAGGATTATGAGTATTTCGGACAAGTGACAAT GTCATATCAGAAGTTAAAAGAAAAATATTATAAAGTGGGGACTAAAACAAAAGTTATTGGTAAAAGTAGGAATCAAAATA ATAAAAAACAAATTATAGAGAGCAAAACCAAACCTCTACATAAAATGGAAGACAAAAAATAACTTATTTATGCCACTTAA TCATGTTAGATTGTTATCTATCTATTAATCTTTTTTTTTGAAATTTCCTATCTATTAATCTTTTTTTTTGAAACATCCTA TCTATTAATCTTAGAAACTAGACAATTTTATCTTTCAATTTCAATATATAACAAACATTATAAATATCTATAAAAAAAAA ATTTATACTATAAAATTTTAAATTCTATATTACTAGAGGCTTAGTTTTATGATTTTGGTAATTGGGTTTGTTTCTGTGGA GGTTGTTTGTGAAAAGTGCAGTGCTGGTGAAGAAAACGAACAAGAGATGGATCCAAAACTAACAGAGGTATCTCAATTCT TCGATCAATTCAAGGCTGCGTTTCTCAGGAATGACTATGATTCCTCTTCCAATCTCCTTTCCCAGCTAAAGGTAATCAAT TCCCACACTCCCCAACCCTAGCTAGCTCATCAACATGGCTGTGAATGAATTGGTATAGCCATGAATGATGAATGAATTCA AGTGTGGTATGCTATATTGGAATCATTACATTACAGTGTGTATATATATAACATATGCAGCAGGAAATTGGATGAATGAA TCTACATTGTTAGTTATATGATTGCTGCAAGCTACTTGAATTCATAGCTCTGATTTATGTGCTCTATAAGATTGTGTTTT GCAAGGACTTAACTTCTTTTTTTTGCTTTTAATTGATTGTCAGTGTAAATATTGAATGGCCTTGTTTACTTGCAGGTGTT GCTAACAGGGTTCAGAAGTCTTCCTCCCTTGTTTGAAGATACACCTAATGCAGTTCAGGAGTTAACAATAGCAAGTAATA TTATTTCACTCTCATCACTCACTCTGTTTTTCTCCCTTGTTTCGTGTCTATTTTCCTACATTCGTTTCTTAGGCCTACTT ATTTAAGTTATGCAAGCAGATTTTCGTCTTCATCTACCATATGCCTGTATCCGTGTTGTTCTTAGTAAGAGAACTTTGCT ATTTGGTTGTGGTGGAAGTATAACTAGCCTTTATTTTACAGTATGGCAAATGGTTAATATGGCTGACTGTATATTAGAGA AGAAAGAAAGAAAATAAGTTTTTTATTTATTTAAAATTGGAAACTGTTAGATGCTTCGAAGAAATGAAAAGCGTGCTCGA TTGATCAAAAGTGTAGAAAATTCTCTCCTGACTGAATCATATTGGAATGAGATAATAACTACTTAAAAATTAAAAAGAAA ACAAGTGCTGCTAAGGAGTTCTGTTTCTGATATGTTTTTTTGTTTGTTTGTTTGTCTGTTGGTGAAACTTTCAGGGGATA TATATGAGCATGCTGTTGTCCTGAGCGTGAAAACCGAGGATCAAGATGACTTTGAGAGGAATTTCTTCCAGTTGAAACCT TATTATACAGATGCCTGGTAACTGATTGTTTCCCCTTTGTTTACATTTGCAAAATATATGTTTCCTGATCACTTTAACTG AAGTCGTATCATTATCAGAGTGTGATTCTATGTGCAATTCTTTTTTCTTTCTTGTTGAGGTCATGTAATTTATTGGAAAT TTTCCTGTGTTGCAGTAGTCGTCTTCCACCATCTCCGCAGGAGTACCCAATACTAGGTCTGAACCTGTTGAGGCTACTTG TGCAGAATAGGATAGCTGAATTCCATATGGAGTTGGAACTGCTCTCATCTTCTGCTCTAGAGAATCCATGTATTAAGCAT GCTGTGGAGCTGGAGCAATCATTTATGGAAGGAGCTTACAATCGCGTATTGAGTGCTTGTCAGACAGTGCCACATGAGAC ATACGTTTATTTCATGGATCTTTTGGCAAAGACTGTCAGGTAATTTTTGTTATCATTTTATATATAGCCTAGAAGAAACT GGAACTCTTGCTTGATTTTTTAGTTATAGATTGTTAATTGTTTAGGATGTGTTCTCTAAACTGATTTGTATAATATTGTT GCTAAATTTTATGAGTAATTTGTAGTCTTGTAATTCTATTTCTGTTTCCTGAAATGTCAATTTGGCCAAAGTTTGATCTT TTAATCTTTTTCCACACCTCCCCAACCCTTTTTTGGCTGTATATTATTTTACCATTTTTGCATCTATGTTAATTTTTTAA TTAGTTTATATATTGTCTTGAAACATTCAGACATGAAATAGCAGGATGCAGTGAGAAGGAGTATGGCTCTCTTCCAATTA AGGATGCTAGGAAAACATTACGTTTCTCATCGGACAAGGAACTATTTGAATATATTAAAGAGGTGAGCCATGTCATGACT CTCAGTGTGTCTAGATCTCATGAGAGATCAAAGGCGTTCATTTTGACCATACACTATACTTGGATGTTCAAGATTACTTT AATTTAATCTTGACTATTCACTTATGTTGTGTGATTAAGACGTTCCCTCTCATCTGTATATAGTGTTTGGGTTGAACTTT TTCTCTTGACAATGAGTTTACTACTAGTATGTTTACAAAATGGAAAATTACTCATCTTTAGTTGCGCATATCATTATGAT TAAAAATTGTCATATATTGATTGCAGGAGCACCCTGAGTGGGAGATTAAGAATGGCCTTGTCTTTTTTCAAAAGGCTAAA GAATCTGCACCTTGCAAAGAAATACCCTCTCTACAACTCATCAACCAGACACTTAGTTATGCCAGGGAGTTGGAGAGGAT TGTCTGAAAAGAAATGAAATGGCTTTGTGTTTTCTAAAATTTCTAGGTGTTTGGGTAATCGTTGCTAATACTGTCATTTG AAATTGTTTATTATTTTGATTCGATGCGGAACTCTAAAATGGTTCATTTCTTTATTTTGGATTTTTGGTCCTCTAGATTG TTGTATTGTTTCTTTTGGTACCGTTTTCTCTCTTCCTTTTAATGGCATGTTTGGGTAATCGTTGCTAATACTCGTTTGTA ATATATATGACTAAAATATCAAAGGTGTTGCTGCTCTTTGGTTTCTCATATATCCACTTCTCTGGTGGGTTTGATCCTCA TGATCATTTCTTATATACACAGTTAAGTTAGCAATGCCATGGTAGGGAGATGCAGTCTTCGTGACATATATCTGCAATGT CCACCCTCCAGAACTCTGCACAGCATCATTCCTCCTAGAGTTTCAAATTGTATGCAGAAGTTTTTCCCTTTGTTACCCCA GGTAAAGGAATGAAGAAAAGAAAGCAAAGGAGGACATG
CDS sequence (LotjaGi3g1v0466400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAAACCATGGTTTCCGATGCCAACTCCAAGATTTCCATGCCTTCTTCTTCCCATTCCAAAATCCTCACTCTTCCCAC CATTCTCACTCTCGGCCGTGTCGCTGCAATCCCTCTTCTCGTTGCCACCTTCTACATGGATGGTTGGCAAGGAACTGCTA TTACCACAACCGTTTTCACCGCCGCAGCAGTTACAGATTGGCTTGATGGCTTCATTGCTCGCAAGATGAAATTAAAATCA ACATTTGGTGCTTTTTTAGATCCAGTAGCTGACAAGCTTATGGTTGCTTCCACGTTGGTCTTATTATGTACTAGACCTTT GAAAGTTGCTCTGTTAGGACAAGCGCCGTGGCTCTTGATTATACCTTCAATCACTATAATTGGTCGAGAGATAACCATGT CGGCACTCAGAGAATGGGCTGCTTCTCAGAGTAGTAAGCTTCTAGAGGCTGTTGGCGTTAATAATTTGGGGAAATGGAAA ACAGCTACTCAGATGATCGCGTTAACCACCCTCCTCGCTACCCGTGACTGCAGTGGCGGAGGAGCTGCCATTTTGGTATA CTTGGGTGTGGTCTTGCTTTATATTGCAGCAGGGCTTGCTATATGGTCGTTTGTAATATATATGACGAAAATATCGAAGG TGTTGCTGAGGTAG
Protein sequence (LotjaGi3g1v0466400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKTMVSDANSKISMPSSSHSKILTLPTILTLGRVAAIPLLVATFYMDGWQGTAITTTVFTAAAVTDWLDGFIARKMKLKS TFGAFLDPVADKLMVASTLVLLCTRPLKVALLGQAPWLLIIPSITIIGREITMSALREWAASQSSKLLEAVGVNNLGKWK TATQMIALTTLLATRDCSGGGAAILVYLGVVLLYIAAGLAIWSFVIYMTKISKVLLR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 36 | 36 | - | – | |
| Phobius | 1 | 21 | 21 | - | – | |
| PANTHER | 10 | 217 | 208 | 2.1E-108 | – | |
| PANTHER | 10 | 217 | 208 | 2.1E-108 | – | |
| Gene3D | 13 | 215 | 203 | 1.7E-10 | ||
| PIRSF | 20 | 217 | 198 | 1.2E-37 | ||
| TMHMM | 22 | 44 | 23 | - | – | |
| Phobius | 22 | 31 | 10 | - | – | |
| TIGRFAM | 24 | 215 | 192 | 2.5E-43 | ||
| Pfam | 25 | 91 | 67 | 5.7E-13 | ||
| Phobius | 32 | 36 | 5 | - | – | |
| Phobius | 37 | 183 | 147 | - | – | |
| TMHMM | 49 | 71 | 23 | - | – | |
| ProSitePatterns | 69 | 91 | 23 | - | ||
| Phobius | 184 | 207 | 24 | - | – | |
| TMHMM | 184 | 206 | 23 | - | – | |
| Phobius | 208 | 217 | 10 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity | Catalysis of the reaction: sn-glycerol 3-phosphate + CDP-diacylglycerol = 3-(3-sn-phosphatidyl)-sn-glycerol 1-phosphate + CMP + H(+). | ||
| Biological process | Phospholipid biosynthetic process | The chemical reactions and pathways resulting in the formation of phospholipids, any lipid containing phosphoric acid as a mono- or diester. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Phosphotransferase activity, for other substituted phosphate groups | Catalysis of the transfer of a substituted phosphate group, other than diphosphate or nucleotidyl residues, from one compound (donor) to a another (acceptor). |
Expression pattern of LotjaGi3g1v0466400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…