Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0477100 |
| Transcript ID | LotjaGi3g1v0477100.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Transmembrane 9 superfamily member; TAIR: AT1G08350.2 Endomembrane protein 70 protein family; Swiss-Prot: sp|F4HW17|TMN5_ARATH Transmembrane 9 superfamily member 5; TrEMBL-Plants: tr|A0A0L9V6E1|A0A0L9V6E1_PHAAN Transmembrane 9 superfamily member; Found in the gene: LotjaGi3g1v0477100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:89359186..89369757) extracted from Lotus japonicus Gifu genome v1.2.
TAATAATTATTTTTCTTAATTTTAGAGAATTAGGTAAATGTTACTTGTGACCTTCATATTTGGGTGTCGGGGTTTTACGT AGGTTGCAGAGGAGAGGATTCACTTCGGCCAAAAATTGGGGCTCTGGAGCATTGGTTGAGCTTGTTGTGGGATGCCAATG TTCGGAGAGCCACCTGTGAGGTGGATTGTTTGGATATTGTTGAAGTCTAGGCCGAGGATAAGTACTAGTTCCATATCTTC GCATATGATTTTCTGGATCTCAAGCTCCTCTTGAAGCGTGATTGGAGTATCGACCTTCTTCATGTGCCTAGAAAGGCAAA TGAAGCCGTGGATTGTCTTGCGGGTCTTGGAATTCGACTGCAATACCCCTGACTTGTCTTGAGAGTCCTTCTCAGCAGCT TGTACCCATTTTGGCTAAAGACTCGTTAGTCTTATAGTGTTTTTTTTTTTTACTTTTCCGATGTAAAAAAAAGATACAAT GTGATTAAAAAAAAACATACATGTGAGAAGTTGTGACAGTGACTCAGTATCCATTTGCATTTGACTCAGTGAGTTGAAAA AAACTCTGCATCTGGCTTCCGCTTCAGCATCTTCATTTCTGGCATCTATGGCTGAGCCCCACAACCTCATTCTCCTTCTT CTTCTCTGCGCCACTCTACAATCTTCACCTCGTTTCATTGCAGCTTCATCCTCGGATCACCTCTACAACGTTGGAGACAG TGTCCCATTGTTTGTCAACAAACTAGGACCCTTCAACAATCCTAGGTTGGTTCCCTTTGTCCCATTCCAATCCAATCTCT CATTGCTTTTCCTCATCTTCACACTCACTGAATTTCTGTTTATCCACTACTTGTCTGTCACAGTGAGACATATGAATTCT ATGATTTGCCATTCTGCAATCCAGGTAAAACAGTCTTAGGTTTATGCTTGATTTCATGATGTTGGAATGGAATCAAATAA TTATACTTAGGTTGTTAAAAAGGATGTGTTTTTCACAGACCCAATTGTGAGAAAGAAAGAGTCCCTTGGGGAAGTTCTCA ATGGTGATCGTTTGAGCAATGCTTTGTATGAGTTCAAGTTTAGGAAGGACAAGATTGATGAGACCTTGTGCCAGAAGAAG CTTACAATTGATCAAGTTGCAAATTTGAAGCAAGCTATTAACCGTGATTTTTACTTCCAGTTTTACTTAGATGATCTTCC TTTGTGGGGGTTCATTGGGAAAATTGAAGTGGATAGATGGACTCCTGGTGGGGGAGGGATAAGCTATTACCTTTTTACAC ATGTTCAATTTGATGTTCTTTACAATGGGAACCAAGTCATTGAAGTAAATGCATTTGGTGATCCGAATCGCGGAGTGGAT ATAACGAAAGATGTTGACATTGATGTTAAGTTCACTTATTCTGTTACCTGGAATGCCACTGAAGTGCGATTCGAGAACAG GATGGACAGATACTCAAGAGCTTCATCGCTGCCTGTCTATCGTCAAGTTCATTGGTTCTCATTCATTAACTCAATAGTCA TCATTCTGCTTTTGGTTGGTTTGCTTGCCCTACTTTATATGCAACATTTGAAGAGCGATTTGAGAAAGTATCTTTCTTCT TCTTCCTCTTGTTTTCTTTCTCATAGTCATGTGAAAGCATAATTGTAGTCTGTATTTATTTGTTAGACTAACTAATTTCA TTCGCAATTTAGGTATTCTAATGCAAATGAGGAAGATAGAGAGGTTGGTTGGAAGTCCATCCACAGCGATGTATTCAGAC ATCCTCCAAACTCATCCTTACTTTTTGCTGTCGTGGGAACCGGTACTCAATTGCTAATCTTGTAAGCTACTTTAGTGTTC GAAACATATTCCTCATGCCTCTTGCCTAAAGCTACATATGCACAGTCTCTGGTCTTTCAGTAGCATTAAAGTTACTACAA TATATGAAGGTCTGTGATTTATGGTTTCATATCTGCATAAAAGAACCTAGGTTTTTAACCAAATCTTGTAGCTATCTGTA CCTAGACTAATTAGTGATAACAAAGGTCAAAATAATTCTCCTTCCGCTCGGTTTCTGCTTTTCCACTTCTGTTCATGTGC TGTTTTGCTTATGGTGAGGGTCACACTTTCCTTTGATTCTTTGTATAGAACTTTAACTAAGCAGAGGCTGACGTTAGGAA TGAGTACTGAGAGAACAAGCTAGACAAGATAGGGTTAGAAATTAATGCATTAGAGAAAGTTGGAGGCTAGCAACTGGCTT GGCTGATTTGAGGGAGAGTAGATCAGATCGAGGGTAGTCGAATAGAGGTAAAGGGAGAAAACTGTGTATGAGAGAGAGAG AGAGAGAGAGAGAGAGAGACAGACAGACAGACAGACAGGAAGAATTTAGATTTAAATGGTTTGTTATCAGACAAAATTTA CAAAAGGACATTATGGTGTCATTTGATTTATGTAACCAACCTAACCTAGTGGGAAAAGACTTGTTGTTTTGAGAAGAGGC AAATTTTGTTTACTTGATACAAACTCAATAAATCCACCTGCGGAGGTTATCAAATAACTTTATTTATGCAATCTTTCATA GATAGATTTCTACCCCAATTCTTGCAACTTATGCACTAGCCTGATATATCTTTGCTCTGTACAGTTTCTTTTTAATAATT GTGCATCATTATTCTACCATGAGCCTAAATGCTCCTGACAAAGGCTGTATCTGTTCTATTCTCACTCTTGATCTCTTCGC TTATACACACATGGAATGCATGTTGAAATTAGTTCCTAAAATAGCAGTCAGAGTGGTTTATATGTCTAGGTCTAGCTTAC CATACAGCCATGGCATTATCTCTGTTAATTTGTGTAATGTGAGAAGAAATAAAAATTGCACCTAATTAACTCTTAGCTTT GTTCCACTTTCTGATATAAACTAATGTTCCATCTTCTTCAGGCTCTTTGTCTTACTATTTCTTGCATTTATCGGCACTCT GTATCCCTACAATCGCGGAGGACTGTTAAATTATCTTGTCCTGCTATATGCTCTTTTATCTGTTTTTGCTGGGTACTCAA CAGCATCCTTTTATGGCCAATTTGCTGAGAATGGATGGGTAATACTACCTAATTTCACTGGAAAAAGGCTTGAATTTGTA TTTTATTTTTAACTATCTATAACTATTCTGTGACTTGACCTTAATTCCAGGAAAAGAGTGTTAGTCTAGCAGGGATTATT TACATGGGACCAGTGTTTGTTGTAGGCTCTGTCCTCAACATCATTGCAATATCATACGGGGCCACGACTGCACTCCCGTT GGGCTCGATCGTTGTGATTCTTGTTTCACTCGCATTTGGTGCCATCCCCTTGCTTGCATTGGGTGGATTGATTGGATATT GCTTTAGATCCACATTTCAGGGCCTTTCCACTACAAAGAGGCATCCTAGAGAGATTGAACAACTTGCTTGGTATAGGAGG ACACCATTTCAAATGTTTATTGGGGGGTTTGTGCCTTTTAGTGCAGTTGTCTTGCAATTACACCAAGTGTATGCTAGCAT GTGGGGCTACAAGATATATACTCTTCCTAGCATTTTGTTTGCCACACTCATCACTGTCATTGTGATTATTGCTCTAGTCA ATATTGGTTTGACATACATTCAACTATCTGCAGAAGACCATGAATGGTGGTGGAGGTATGTTGTGTTGCTGACATTAATG CTTGCGCTTTGCTTCCATTTAAAGATCAACAGAAAATGTTCACATTATGATCCATTCAAATACATAAATTCTTCAAAGGC TTTTAATGTAAAAGGAATTGGACTGCTTTGTAGTTTTCCTTCGTTGCTTCTGACTCTGATCCCTTCTACTCTTTATTCTC TCCTCTTCAATAATACTTCTCTTCTTTTGATGATAAATAAGTACATGGTTTGAATCAAATAAAATTGTGGAAAAAAACTC AGAAGACATTTATCTGTTGATGTTTTTTTGTCTTTAGCTCGGATGTCTCAGCCCGTTCGGGAAACTGTAGTTATCACTCC CAACAAATGACTTTCCCGGAGTTCGAACTAGGGTGAGAACAAAAATTCGAACCCTGGGAAAATTATTTGCTGCAAGGGAC AACTAAAGTTTCCAGAACAGGTGCAAACATCCGGGTCGGAGACAAAAAAAAATGTACATGTTAAATGACGTTTTCATGAG AATTTTTGAAGTAAAGAAGAGTAGGATCTATTAACATTAGGCACTGTTCAGTATGAGGTTTTGTCATTAATGTTTTCTTT TTGGTGGATGCAGATCTGTGCTGTGTGGTGGATCAACATCCATTTTCATGTTTGGGTACTGTATCTTCTTCTATGTGAGA TCAAGTATGAGTGGATTCTTACAGCTATCCTTCTTTATTGGCTACAATGCATGCATATGCTATGCTTTCTTCTTAATATT TGGTGCGATCAGTTTCCGAGTGTCATTGCTATTCCTTCGCTGTATATACCATGATGTTAAAAGAGAGTGAGTCACCTATC TCAAGCACAAAGCAATATTGGTTACATTATTGATGGACTCTGCAATTCTGGAAAGTGAAGTCTGCACAATGGGACATATG GGAATTCCTTCACTGAATTATTTTACAAGGACACTTGTGCAGAAATTGTATCCTTTATTTTTATTTTGGGTTTTTGAATG TGGACTGAATCTGTGACTGCACAATGCACATTTTGGAAGAGGCTTCCTGGTGGCCAATCTTAGCCTTGGTGGAAGATATT AGTGGAATGATGTGGAAGGTAGGTTGCTAGAGACCAGGTGAGTTTCTCAGGGAAGTTTAGTCCCTAAGTTCTTTGAGGAA CTTGTTCTTGTCCGGGTGTTAAGTTTGTGGGGAGCTTCATTTAGAGCCCGTTTGGATCTCGGCTTATTGGAGCTTATTAG AGCTTATCTACTAGAAAGTGCACTTACTAAGCTCCATTAAGTGTTATCTGGTTTGGATCCAAATGGGTAATTGACATTAA TATTTACTACTACTGTGGTGGTGATGTGCAACAAATGAAACTAGCAGCTGCACTGTAGTATACTCACCACCTAGATTGCT TAGTTAGTACTATAAGGCTTAATTACATTTTGAATCCTCCAAGTTTAGTGATTGTGATTTTGATTCCTTACTTTTCAATT TTGCAATTTTGGTTTCCAAATTTAGTGATTTCACTATTTCGATGTTTGTTGTGCATGTAGTTCCAGTAGTTTTACTAACT TAACGTCCAATTCTTAATGTTCTTTTTGCTGGTACGGTTAGTTGTCATATTAGTAAAAAGGGTCTTCTCAGCAACAAAAA AAAATGTGTGACTGCATTTGCAAAATTAAGAAAAATAATGACTCAAAATTGCAAAAGGAGAAGAAGAGGACTACAACTGC AAAACAAAACTAGATGAAACAAAATTGTGAAAAATGAAGTAGGGAACCAAAAAGATGAATCACTGAAATAAGACATCGTG ATACATTATGGTATTTAGTTAGGGGCAAAACCTCTGTATTATGTTGATGCAATTCTTCATAAATCAGTTGAGTCATTTTT TAGGTTGGTTCAAATCGGTGTACCAATTGATAATGTCATAAAAACGCAGAAATAGCAGTGCAATGAAATCGACCTAAAAT CTAATAGATCTAAGAAGTGTCTTCTGCACTATATTAAGCATTGATTTAAATATGGATAATTCTACTTAGCCTGAAATATC TTTTTTTTGTTACAAGATGAAAAGTACATAGCACTACTCTTTAAATATCGATAAAAATTTGATTGAATCAGATTCTGCTG AAGAAAATCAGTTTGAATCAATTATTTTCTCTTTATTATTAAAATTTTATTTAATCAAATGTTTTCAATCCAATAATGTT CAATTTCAAGTTATGAAGACCTACATATATGAATTGATTTTGAATTTAAAAAACTAACTTACCTTCTTATTTTTTAAGGC TAATTTAACAAAATATATCATACAAAATAAAAAATATAGCTAATTATCATTAGTATCACTAATTCAACTACGATTGAACC AATAAACTATTCAATTACCCCAATAAAGAGTGAACTAGTATTTTTTTTAAACATGATATTTAGAACCTTCAAACTATCAA AATTAAACCAAAAAAAAAAAACTTGAGGATATTGCACTTGGGACCTGACTAAACAAAACGGATCTTATTAACAAACAAGA TCACAGCATGATAAACCAAACGGATATAGGATGTTTGTAGCACCACTTGACAGTGGCTGAAATCACATAGTGGAGCACTA AAGCTGGAAAACAGTATTTACAAAAGGAAAAACAAAACTCTCAGCTCCCTTAGCATGTATGCATGACTATAGTGTAAGAA AGCCATTATACCATATATGCACGTGTGTAAACATTAGAGAGTAGAGGAAGTTCTTGACTTCTGAATCTTATCATCCTTTG AAGGAGGTGATGACAGTGTTGCATGGTAAGATGAGGAAACAAGTTGTGCTAAAGCAGGAACAGCCCCACCTGCAGTTAAT TCAGTTACATTGTTATCAATTCAGCAATATAGTAAATCTATGTCACAAGGATAAAAGCAATTAAGAGCTCTAAAAGAAAG GTTAGCACTTATCAGACACAGAAAATGATGTCTGGATAAGTACAGAATTATCACTCTTGAACACGAAAAATTCTTGCAAA TGTGAGAAATGCTCGGTGTGTTGTGTGTGTTAGTTGAACTTATTATCTAGTACCTACCAAGTTAGTAATAGCTCAAGATT TAACTAAAGACCTTATACATATAGTATTAGTATATAAGCGAAGCAAAATGTGGTAACACAATCAGAAACTCACCTGCCAG TCCTGCGCAGGCTGAAGAGAATACTATCACAGGTGGTGTCTGAAATCAGAGAGAGTTTTCAGTCAGAATGATGGTAACAA TTAACAAGTTTACTGAAATAAGAAGGCAGGAAGTATCTCTCTGAGGGTGTTTCTTCTGGCATAAATGTGTTGAAAACTAC TGAAGTCTATTTCACATACTCAAATATGCAAAAGATGTTCCAGTCAAGAATGCAAGTGTTATATGTTCTAAAAAATGTGG CTAAAATTTTCTCTAGTAAAATGCAGCACGTAGAAGAACCGCTTCAAGAATGTAATTGAGACCAGCACCATCCCCCAATC CAAATGAAAAGAAGATATGTCTACTGTTGGCAAGTGGAAACCAAAATATCTTATCATAAGATATGGCCATCATGGAAGTA TTTATGTACTAAACACTGTCTGAATAAACTGACATAGATAAGAAGCCCTTTTATTTAAAGTTATAATATCATGGTTCTCT TACAAATTATAGAACAAGATATAAGTCAGCTTACTTCTATGCATGACTATAGCAACAAAATCACTTTATACATAAATGGA GGAAGCAAGGGTGTCTAGGTCACAAGGGCTGTTCTCTTCTTGAGTCTTGACATCATAGGAAATTGACTAAGGATGTCATA GCAATGCGAAATTTGCATCAATTCTTGCCATTGTTTTGGAGGAAAATCAGAAGGAAGTTCAGACTTAGTAAAATAATATC TCCATGAGATTTTATTAGGGAAACAAAAAGAAGCAGAAGAAGGAAAGAACCTAGATCATGAATAGTTACATTTTACAACT TACAATAGAATACTGTGAGGTGTTTAGGCTGCTTAATCTTTCTCTAAGAGCTTAAACAAGGGTGTCATAGCAATGTGAAA TTTGCATCAATTATTGCCATTGTTTCGGATGAAAATCAGAAGGAAGTTCAAACTTTTAGTAAAAAAATATCTCCATGAGA TTTTATTAGGGAAACAAAAAGAAGCAGAAGAAGTAAAGATCCTAGATCATGAATAGTTACATGTTACAGAATACTGTGAG ATGTTTAGGATGCTTAATCTTTCTCTAAGAGTTTAAAACAAGTCCAAAATATTCACCTCCATAGACACATTAAACATGAG GAAAAGGTATAAATGAGCAAAAAGACAGAAGTATAAAAATGATGCATCAAGAGGGAGAACTGGAGAACTAATAAAATAAA TGACAAAAACAAAAAGGGCGATCAAAGGGCACAAGAAACTTACACCAATGAGAAAATGTAACCACATAGGTCCTTTTACA TATCTACGGACAACTGGCATAACTGCATTACAAAAGAAAAAGAGAAACCCTATTCAATAATAGTCTTGGCTGTTAATATA ATCAAAACCTCATTCTAAGTTTGGAATATGAGCTGTTTCTGCAAGTACAACATACAAACCAATCAAACTTATACATTCTC GTTCATTTTATTATTAAATGCTGCAAGTCCCTCAACTCAAGTTTGAATGCAGTGCATCATAGTAGTTTTAATGACAGTAT TTGAGTTTTCTAATATTCATAAGCAATGAGCTAAATTAACACTGAACTACCTAATATTAGTTTACTCATGACTAATGAAG GTGGGGCAATAAAAAGGGCAGCACGGTGCATTAAAGTTTCCGCTATGCGCACCGACCGCATGGTCTTATGTACACAGCCT TACATTATTTTTTATACAAGAGTCTGTTTCCGCGACAACTTTTTACTGTTGCGCCAAGGCTCCCCTTAATTCTATAACAA GTTTTTTCATTCTTCAAACATGAATGAATACAATACCCTTTAGAGCATCATAGAAACTACAAATGAGTGTAAAAACACAT ACATACCATGGTTGAATCCATAAAATGCACTTGTAGTGCCACCAACAGCAGAACCAATCTGCAAAAATTTAAAACAAATC CAGTAACAATAAAAAAGTCAGAAACCCGTATCAAAATCAAACTAGTCCCACCATTCACCGCATGATTTAGATCCAACACT CAACAATTAAACATAAAAAAGGGCAAGTGAAAAATTGGATTTTGACAACAAATAAGAAGTGGGGTTGTGGAAAATTTACC ATAGAGAAGCTGTCCCTGACGAGGGGTGCAATGGTCCAGTCACTGGTTTCCTGCAAGGAAAAAAGCATGAAATTGAAAGG GGAGAAAAGGGGAATTGAATTGAATTGAGAGAAAGTGTGGAAGTGGAAAATCATACCATCTCCTTTGAAAGGGGTCCTGC ACAGTGATGGCATCGAAGGTCGTTTTTACTGGAAGACATGGTTGGTTGGTTCTGTGTGCAGTGGCGGATCCAGGACCCGG GGGTCAGGGGGTTCAAAATTTTCAAATGAACACATCGGTAAAAATAAAAAATTACAATTTCTAATACAATAATACAAAAT CAATAAATTGGGGAGACCACAAAAGAGAATACATTAAACTTTCACTTTAAATAATGTCATGCACTCTATAATTGCTGCAG CAGAAGAATTGAACAAAGTGTCCAAACCGATGACTCATCACACTTTGAATGAAGATTCCTGATGTTTGTTTGTGTTAAAA GAAACAAGAAGAAAAATGGTAAAAAAATTAAAGGATAAATGAAAGGTTAAAAGTAGTATCCGGTCATTATTGTACAACTA GACTGCTTAATTCTTCTGGCATTTGTCATTCCTAAAAGCATTATAATTGAGAAAGTGTATTGCATTAGCATAGGTTCTCC ACAATCACTTATTTCAGCTAGTGTGAAACATGAAACATTATCACATTGCAGTCATTTTGCATCTTCTGGTTGATGCCCTT ATGAATTGATAAGAAAATCCCATGACTCCAAAAGGTCCAACTTATCATGTAATATATAAAGTGCCTCAGGTTATATTATG GAATTAATTGATCTATCTAGTTGACTACACCCAGAGGGAAAAGGCTTTGGTTGCTGTTATGAAGCATTTCAGTCTCAGAT ATCAAGCATGAAGCTTTGGTTGCTCGATTGTGATTTCAAACCATCTATCTTCCAACTTTCAAAATTGAAATTTCAAAGCA GCAGCACATAGAAAGCAAGATCAGAAAACACTTCATAGGACTCCTTGAACTCACACTTGAAGACTAACTCTCTAATCCAA ACTAAAATCAATATTTTCAACACATCTTATGATCTTAACATAATTCAAAACATATCAATCACCATTTACAAGGTTATATT TTTTTGAAATCAAAAAAGGTTATATTACCACATCATAAGAGGTTAAATCAGGGTAGAATTTCTTTCCTAAAGCCAATGGA CCTAAAAATTAGAACTTGATTGTTTCAAAGCTTTCAGCAGGGAAGATGTGTGCACGTATAATACCAAATCATGTTTCCTT TTCTTCCCTCAGATCTCAACGACATGGGTTTTCAGTTTTCACCAAAAATCAATTTAGCAATCAATTAGCTGCATACAAAA ATCAATTTAGCAAGTAGCAACCTTACCATGTTACCCAGTAACCCACAGACTGAAACAGAAATAAGAAGCCGAGATAGGCA GAGGCGCGGCGGTGACTGGTTATGCGTGGCCGGTGTTGCGTGTGTACCGGTGGACCTAGGGTAGCGACTAGCGAGAGAAA GAGGGTGAGTACGCTGTGTGAGGATTAGGGATAAATTAAATTGATTGAATATCCATGTAAAAATAATCAATTATCATGTT TTTTTTTATACTTAAAAAATTGGATTTAATAATCAACTTTCAAAACTAAATTACACTCATATAGGAGATGTTAGCTTGTA GCAAAGGAATAT
CDS sequence (LotjaGi3g1v0477100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTGAGCCCCACAACCTCATTCTCCTTCTTCTTCTCTGCGCCACTCTACAATCTTCACCTCGTTTCATTGCAGCTTC ATCCTCGGATCACCTCTACAACGTTGGAGACAGTGTCCCATTGTTTGTCAACAAACTAGGACCCTTCAACAATCCTAGTG AGACATATGAATTCTATGATTTGCCATTCTGCAATCCAGACCCAATTGTGAGAAAGAAAGAGTCCCTTGGGGAAGTTCTC AATGGTGATCGTTTGAGCAATGCTTTGTATGAGTTCAAGTTTAGGAAGGACAAGATTGATGAGACCTTGTGCCAGAAGAA GCTTACAATTGATCAAGTTGCAAATTTGAAGCAAGCTATTAACCGTGATTTTTACTTCCAGTTTTACTTAGATGATCTTC CTTTGTGGGGGTTCATTGGGAAAATTGAAGTGGATAGATGGACTCCTGGTGGGGGAGGGATAAGCTATTACCTTTTTACA CATGTTCAATTTGATGTTCTTTACAATGGGAACCAAGTCATTGAAGTAAATGCATTTGGTGATCCGAATCGCGGAGTGGA TATAACGAAAGATGTTGACATTGATGTTAAGTTCACTTATTCTGTTACCTGGAATGCCACTGAAGTGCGATTCGAGAACA GGATGGACAGATACTCAAGAGCTTCATCGCTGCCTGTCTATCGTCAAGTTCATTGGTTCTCATTCATTAACTCAATAGTC ATCATTCTGCTTTTGGTTGGTTTGCTTGCCCTACTTTATATGCAACATTTGAAGAGCGATTTGAGAAAGTATTCTAATGC AAATGAGGAAGATAGAGAGGTTGGTTGGAAGTCCATCCACAGCGATGTATTCAGACATCCTCCAAACTCATCCTTACTTT TTGCTGTCGTGGGAACCGGTACTCAATTGCTAATCTTGCTCTTTGTCTTACTATTTCTTGCATTTATCGGCACTCTGTAT CCCTACAATCGCGGAGGACTGTTAAATTATCTTGTCCTGCTATATGCTCTTTTATCTGTTTTTGCTGGGTACTCAACAGC ATCCTTTTATGGCCAATTTGCTGAGAATGGATGGGAAAAGAGTGTTAGTCTAGCAGGGATTATTTACATGGGACCAGTGT TTGTTGTAGGCTCTGTCCTCAACATCATTGCAATATCATACGGGGCCACGACTGCACTCCCGTTGGGCTCGATCGTTGTG ATTCTTGTTTCACTCGCATTTGGTGCCATCCCCTTGCTTGCATTGGGTGGATTGATTGGATATTGCTTTAGATCCACATT TCAGGGCCTTTCCACTACAAAGAGGCATCCTAGAGAGATTGAACAACTTGCTTGGTATAGGAGGACACCATTTCAAATGT TTATTGGGGGGTTTGTGCCTTTTAGTGCAGTTGTCTTGCAATTACACCAAGTGTATGCTAGCATGTGGGGCTACAAGATA TATACTCTTCCTAGCATTTTGTTTGCCACACTCATCACTGTCATTGTGATTATTGCTCTAGTCAATATTGGTTTGACATA CATTCAACTATCTGCAGAAGACCATGAATGGTGGTGGAGATCTGTGCTGTGTGGTGGATCAACATCCATTTTCATGTTTG GGTACTGTATCTTCTTCTATGTGAGATCAAGTATGAGTGGATTCTTACAGCTATCCTTCTTTATTGGCTACAATGCATGC ATATGCTATGCTTTCTTCTTAATATTTGGTGCGATCAGTTTCCGAGTGTCATTGCTATTCCTTCGCTGTATATACCATGA TGTTAAAAGAGAGTGA
Protein sequence (LotjaGi3g1v0477100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAEPHNLILLLLLCATLQSSPRFIAASSSDHLYNVGDSVPLFVNKLGPFNNPSETYEFYDLPFCNPDPIVRKKESLGEVL NGDRLSNALYEFKFRKDKIDETLCQKKLTIDQVANLKQAINRDFYFQFYLDDLPLWGFIGKIEVDRWTPGGGGISYYLFT HVQFDVLYNGNQVIEVNAFGDPNRGVDITKDVDIDVKFTYSVTWNATEVRFENRMDRYSRASSLPVYRQVHWFSFINSIV IILLLVGLLALLYMQHLKSDLRKYSNANEEDREVGWKSIHSDVFRHPPNSSLLFAVVGTGTQLLILLFVLLFLAFIGTLY PYNRGGLLNYLVLLYALLSVFAGYSTASFYGQFAENGWEKSVSLAGIIYMGPVFVVGSVLNIIAISYGATTALPLGSIVV ILVSLAFGAIPLLALGGLIGYCFRSTFQGLSTTKRHPREIEQLAWYRRTPFQMFIGGFVPFSAVVLQLHQVYASMWGYKI YTLPSILFATLITVIVIIALVNIGLTYIQLSAEDHEWWWRSVLCGGSTSIFMFGYCIFFYVRSSMSGFLQLSFFIGYNAC ICYAFFLIFGAISFRVSLLFLRCIYHDVKRE
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 25 | 25 | - | – | |
| SignalP_EUK | 1 | 19 | 19 | - | – | |
| Phobius | 1 | 6 | 6 | - | – | |
| Phobius | 7 | 17 | 11 | - | – | |
| Phobius | 18 | 25 | 8 | - | – | |
| PANTHER | 24 | 591 | 568 | 1.4E-270 | ||
| PANTHER | 24 | 591 | 568 | 1.4E-270 | – | |
| Phobius | 26 | 231 | 206 | - | – | |
| Pfam | 56 | 547 | 492 | 4.1E-140 | ||
| Phobius | 232 | 254 | 23 | - | – | |
| TMHMM | 232 | 254 | 23 | - | – | |
| Phobius | 255 | 291 | 37 | - | – | |
| Phobius | 292 | 316 | 25 | - | – | |
| TMHMM | 294 | 316 | 23 | - | – | |
| Phobius | 317 | 327 | 11 | - | – | |
| Phobius | 328 | 350 | 23 | - | – | |
| TMHMM | 331 | 353 | 23 | - | – | |
| CDD | 332 | 577 | 246 | 0.00442834 | – | |
| Phobius | 351 | 361 | 11 | - | – | |
| Phobius | 362 | 389 | 28 | - | – | |
| TMHMM | 366 | 388 | 23 | - | – | |
| Phobius | 390 | 394 | 5 | - | – | |
| Phobius | 395 | 423 | 29 | - | – | |
| TMHMM | 398 | 420 | 23 | - | – | |
| Phobius | 424 | 443 | 20 | - | – | |
| Phobius | 444 | 466 | 23 | - | – | |
| TMHMM | 454 | 473 | 20 | - | – | |
| Phobius | 467 | 485 | 19 | - | – | |
| TMHMM | 483 | 505 | 23 | - | – | |
| Phobius | 486 | 505 | 20 | - | – | |
| Phobius | 506 | 516 | 11 | - | – | |
| Phobius | 517 | 541 | 25 | - | – | |
| TMHMM | 517 | 539 | 23 | - | – | |
| Phobius | 542 | 552 | 11 | - | – | |
| Phobius | 553 | 581 | 29 | - | – | |
| TMHMM | 554 | 576 | 23 | - | – | |
| Phobius | 582 | 591 | 10 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
Expression pattern of LotjaGi3g1v0477100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…