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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0477400 |
| Transcript ID | LotjaGi3g1v0477400.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | transcription factor-like protein; TAIR: AT1G08320.1 bZIP transcription factor family protein; Swiss-Prot: sp|Q93XM6|TGA9_ARATH Transcription factor TGA9; TrEMBL-Plants: tr|A0A151TNY7|A0A151TNY7_CAJCA TGACG-sequence-specific DNA-binding protein TGA-2.1; Found in the gene: LotjaGi3g1v0477400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:89376232..89385006) extracted from Lotus japonicus Gifu genome v1.2.
CTCGGAAAAATTGATTTAATTGAAATCAATTATCTAAGTCGATTGTCAAACATCTATAACTATCTAAAAGTGATTCTCAT CAATAAGAATCTCAAGTGGAATGAGACAAGTTTGTTAATTGCTAGTACAAGATTTGAGAGTACCACAGAGTGAGTTTCTC AATCTGAAGTATTTACAACTAAGGACATTGATAAAGCAAGCCAAACACACCTATCAATCAGGTTTCTTACTAGAGAAGGA GGCAAAGAAAGATAGTGACACCCTATAAAATCTAAAGTTTTGCAAAGAGGAACTTGTATGAGAAAAAGGCCGGACCCTCT TGTGGCAACTTATATATTACTTTGAAAACACAGCTTTGATCTTTCTCTGCTGTGTGAACTTTTCCACATACCTATTTGTC CTTAGAATTTCCAAATAAAACAGTGGTGAAGACAAGGGATTCTAAATAGGTGTGTATATATATATGGACACACACACACA AGCAATTTTAATATTCTTATGGTAATCAAGTTTTGTTTGTGAGTTGAGTTTCTGGCAAATGAGAACCTTTCAGTTTTAGC TACAGGGGAAGAAGAGAATGGTCTGAATAGTCTTGCATGGCGAGCCAAACAATCGGAGAAACCGGTTTGTCTGAGTCAGG GCCTTCAACTCACCATGTTCCTTATGGAGTTCTTCATGGGATAACTACCTCTGCATCAGGATTAATGTATTCTTCAACTA TTTCTCCATCTCATAGCTTTTAACTTGAAAAATTATTAATTCTAAAGCCAGACTCAATTATAAATAGAAGTTTCTTCGAG TTGATTATGATGAAAAAGAAGTTGATCTAGTAATTGAATTCCTAAGAAGGAATTGATATATGGATGTTTCTTCATTTTTA TAAATTTGCTTCTTAATTTCCATTCCACATAATATATATCTGACTTGGATTTTGATGTTTTTTTTCTTTAGTAATCAAGG GGAAGCTTTTGATTTTGGAGAGCTTGAAGAGGCAATTGTTCTCCAAGGATTTAAGATTAGAAATGATGAAGCCAAAGCAA GTAAGTTCTTTTCCATTTCCATGGCTTTAACTTTTTCTGACATTAGATAAGCATAACTAACTCTTCTCAAAAAGGTAGAG AAAGGAAAGAGTGAAGTTTGAATATGTCTAAAGTGCTGAGTGGGGGGAGTTACCATTTTAGGTACCATAATGATTCTAAG GCAATACACTTAGATGGCATGGGGTTACAATCTTGGAAACATGATGACTTTCCCTTGCATGATTTTGCTGACTCCATGGA TGTTGAAAAAGGAGGATTAGGTTCCTTCCACCTTTTGATATAATTGTGAATCATAAAGCCTTTAAATTTTTGTGATCTTC TGAGATTTTCCATTTTGTGATTGTTGTTACAGCTTTGTTCACAGGCAGGCCTGCAGCTACACTGGAAATGTTCCCTTCAT GGCCAATGAGATTCCAACAAACAACACCAAGAGTAGTAGCCTCTCTCAGTTCTCCATCTTTGACCAATCCATATGTAAAG ATTCTTAGAACTTAGCAATATCACTAGTTCAATCAAATTCCAATCCCTTTTTCTACCTTCCATTTTGATAAGGATATATA TGAATTTTCCCAATTCAAAACTTCATTTTCAAAAACTGTAGATGAGTTTATTGCATGTGTGGGCCAACTTCTCTTTACTC AGAATCAATTCTGAAACATGAAATCTATAACAGAAGCTTCTACCTAGAGTTGATTCTGTATTTATAATTAATTGTATAAG GATTTTCAAACAGCCACTAAATCAAAGAATTTGGTGGGTTTTCAAACACAGGGAAGTTCAAAGTCAGGAGGGGAAAGCAC TGAATCAGGATCAGGAATGAACACTCTTTCAACCAAAACTGAGCTTCAGTTTGAAACAGACTCTCCTACAAGTATAAAGG CATCTTCTTCAGACCATCATCATGCTTTTGATCAGCATCACCTGCAGCTTCAACAGCAAAAACAACACCAACTTCAACAT GAGAAGACTACTGATCATGATGCCTCAAAAGCTGACCCACCACAGAATCAACCAGCAGCAAAATCAGCTCAGGAAAAGGT GTTCTTAAACAAACATTTTTTTTCTACTGTTAATCTCTAAATTCTATCTTTTCCTTCCATTTCACATTAATAAGCGGTGA GTTAGTGCATATTTAGATACAAAGTATAAAATAACGATAAAACAAAATTTAGTGTGGACAGAAATAATTTCTCTTATCTT TTAACTTTTACAACTGTTTATTGTGATATTTAATATTTTACAATGTATCCAATCATGTTTCTAGTCTCTTTCATGCAATC ATCACTGTTTTGGACCTTTTGGTTGGTTTTCTTTCTCTGTCCCTCTCCCTTCAGTGAACCTCTGCACTAAAGAACTGCAC CGATCCCAACAGTTCTCAGAAAATCAAGAGAACACAGAGTTTTTCCTGATTCATGAAGGATTTTCTGATGAATCTCTGAC ATGAAAATAAATTGGGGAGGAGAGAGAGAGAGAGTATGATGAACGTGACAAAGTGACAAACATAAGTGAGAATCTTTTCA GTCCTTATCATAGTTTTCCTTTTTAACAGCTAAAAACCAGCCCCACTTCACTGAATCCCCTTAACATACTGAAAAATTCT GTTTTTCTTCCCATTTAACTCTGGAGTACTTAGAAATTAGAAATCTAAATACCAACAATACACACTCCAAAACAATGGTG GATAATGATGCTTTTTGCTACCCATATCATCTTGATCATTTCATGCTTCCTCAAGAAAAAGGGCCTCTGGATTCAGAAAT GCTAATTCACAAAAATTCTGTGAGCACTTTAATATGAGTAACATTGAACATTGTTCTTCTTTTAATCTTTTTCTTTCCTC ATTATGCTGGTTTTCTAGTTCCTTATTTAACACTGAGCTTGAGTAATTTAAATATTCGAGTTTCCAATATGAATTAACTC CTCTTTTTTGTTTTTGGGGTTTTATTTATTGCAGAGGAAAGGAGCAGGTTCAACATCAGAAAAGCCACTTGATGCAAAGG TTTTGATTGTTGAATGTCACACACACTGACACACACACATTTATTTATAATGTGCAATTGTGCATTATATGTTGTATTCC AAGTTATATTTATACTTTTATTTTTATGTATTCATGTGTGGTAATTCAATTTTTTTCTTGTTTGGTTTGGGTTCAGACAC TAAGGCGTTTAGCTCAAAACAGAGAAGCTGCAAAGAAAAGCCGTCTCAGAAAAAAGGTGTGTCTCATATAATTACATATA CAATTTTTTGATTACAAAGAGTGAAAAGTTGGCCTCAATGCTTGGATACACGATAGAAAATTACATTGAAGCCGAAAATC ATAATGGATAAGAAAACATTTTTCTTAATTTTTGCATATGACCATCACGATTGTTCTATACAATTAATTCTGAAGTTGCA ATTAGTTCTTATAGGAGCTTCTAGCTTCTAAATGTCAGAACTGATTCAGATAAAAAAATAAGTAGATACATGTTGTATTT GTGTTGATCATTAATTATCCTTCACTACATTGCAAACAGGCTTATGTGCAGCAGCTAGAGTCAAGTAGGTTAAAACTCTC CCACCTTGAACAAGACCTTCAAAGATTGCGCTCCCAGGTATATAGTCTCACACACAATACTCTAGACTATTGAATTATTA TAAAATATGTAGGTGAAAAAATAATATTTAATGAATGTTATCTTGAAATAGTTTATCACACAAAAATAGTGCATAATGTT TGCTTTTTTTTAAAACTTCTAATGATAATTATTTGTGCTGCTTAATTTGACAGGGACTGTTCTTGGGTTGTGGTGTTGCT GGTGGCAATTTAAGCTCTGGTGAGTTTAGCCCTTTTTCTTCTTTTGTTCTTTTGTTGCTTTTCCAAATGCAATTTTTTTC TAGTAAAAGATAGAAGGGAAGCATGGAAAAATTTGGCATCATATGAATACCGGAAAGTTTTGGGAAATTTTTTACTCTTT TTTATACTTTAGAAATTAAGGGAGCAAGAAACAAGGAAATAAGTCGTCGGTGAGTACTTGCTATACACGCAACTTTTTTA TGCAGGTTGAATATGTTAATTAAAAATAAAACCAAAAGATTAAAGTCAAATTTTTATTTTGAGTTTGAAAAGTAAAACCC TATGCCAAAAAATAATCTAGAATCAGATATATAGAAGTCTTGGAATTTGACTAATGGTTATGGCCTAATTCGCGTTTGAA TCCTTGTAATAAAATAAGCTAGTAAAAAAAGACCATTATTCAAATAATTAAGCTCATCATGGTAATATATTAAAATGTAA TATTGTTACAAAAAAAATATTAAAATGTAGTAATATAGAAAACGTGCGGTCCTTTCTACTTTTAGTTAACACATTGGGAT TAAAAAGATAAAGTTGTATGACAAAAAGTGCTAGTGTCCTAACAAAATGACGTTTGGAATGAAAATTAAAAAATAAAGCA TATTAAATTAAGGTTTATCCATTGATTTTGTCCATCTGAGGACTGAAATGAAATGGTGCTAGGTCAGTTTCATTACGGGA TATTTATACTGGTGCATCCAACCCATTACTTTTTAATAATATTAAAAATATATACGATATCGTAATAAGAAAAAAATTGC GATTTGTAACCATAATTGAGGCCACAATTAATATAAAAAAAATTGTGTTCTCGCAATGGATGCCACAACCGTACTTGTGA TCACATAACCCCACTTTTGTATATAAACAATTACTTGATATAACCAAGATCAAAACCACAATTTAAATTCTATTTGTGAT TTAGCATTATTAGTTAGCAAGTAGTAATTAACAAGTGAATCATTGTTTTGTTGTAGGAGCTGCAATGTTTGACATGGAGT ACGCTAGGTGGTTAGAAGATGATCACCAGCACATGGCGGAGCTCCGTACGGGGCTGCAGGCGCCGTTGTCCGACAACGAA CTCAGAGTCATTGTGGATGGGTATCTGTATCACTATGATGAGCTTTTCCGGTTGAAGGGGGTGGCTGCAAAATCAGATGT TTTTCACCTCATTAATGGCATGTGGACTTCCCCAACTGAGCGATGCTTCCTCTGGATAGGTGGTTTTAGACCCTCAGAGC TCATCACAGTATGTATTATCTATATATTCTTTTAGTATAATATTATCTGCCGTAAACTAAGAAAAATCTGGTTCACAAAT TAACAATAATTCTCTTGGAAATCAAGTATATGTTATATTTGTTTGAAATGAATTAAGTATATATTATAAACCATGTTTAA ATTGTTAGATAAATCCACTAATTTTAAACTAATCACATATTTTTATAATTATCTAACTCATACATATCTTTCATTAATTA TTAGATGTTGATACAACAATTGGAGCCTTTGGCAGAGCAGCAAATAGTGGGCATATATGGTCTGAGGCATTCATCACAAC AAGCAGAAGAAGCTCTCTCACAGGGCCTCGAACAACTCCGCCATTTTCTCATTGACACGATCGCAGGTGCTCCTGTTGTC GACGGTGTGCAACAAATGGTCGTCGCCATGGGCAAGCTTGCCAACCTTGAAGGTTTTGTCCATCAGGTAATCAATTACGT TGTTATATCTATGGTGGATTATGTAAAAACTAATTCACCAATAAATTATATTTTTACATGTTTTTATAATATACTTATTA TGCACAAAAATTAATTTACGATTTTTTTCATGATAGGGAAAAGCTTATACGTACTAATGAACAATTTCATATCATATATT GTGCCATGTTTCATATCTAAAGTAACGGGGGCATTTAATTATTAAGCAAAATGTCATATTTTATTGAATTGATTGCTCAC ATTATGAAATAGGGGAATATTTTTCTTATGTCTTAATGCTAAAGTATTTTTGAGCATTAAATTTGGTGTGGGAGTTGACG TAAAGCCTCATGGTGATGACATCTGTGTCATGATTATTTGTAGCATAATTAATAATTTCTTTATGATATACTCACTCCAT TCCTATTTAACTGACATTTTAAGGTTGTTGCACAAGTATTAAGAAATAACAATTAATGTTTTTGTTTTATTAAAGTTACA ATCTAACTTCCTATTATACCCATTATCTCTCTTATTAATTCTACCTTTTCAATTTTCCTACCACCAATAAATGAAGGGTA CAATTGGTAAAGTATAATTAATGTTCTTTTGAACTTTGTAAAGTGGCAGATAAATAGGAACAAAATTCAGCTAGAACTAG TGTCAGTTACTTAGGAACAGAGGAGTAAATCTAGGGTGTGAAATGTAGCAAGTTTTTGTTTGAAAATGGATTGGTGACCA TTCAATTCGGTTCATAGCTTTGTTTTATTCTCTTTTGACTTAAATCATTTAAAGATCTAGTTATGGACCATTCTTTATTA ATTATTACAGTACATAATATCCTTACATTTTACATAGTTAAGTGAAAATCGAAAGGAAAAAATAGTGGTGTAAATGAATA TTTGTATATCAAATATTGATAATGATATGTGATGCATAATTAGTAATTATAGCTGAAATGTTACTTTCAAATTCTAGGTC ATCCTGTTTCTTTTGCTCATTCATCCACTTCATGCATGTTTTGCGCCGCAATTCTGCCTTGTCTTATACTAGAAAGTAGA ATATTCTTAGCTTAATTTAACTTGAGATAATTCACTTTTTTTGAGTTTTTTCCCAGTATATGGCTAAAATGTAAAAAAGC CAAAGCTTGAAAAGTACTTCTTTTAAATAATCCCTACACGTACGCTTGCCAAATGACAAATTAAATATTATATATCTATC TTTGGTTCTTTGATAAGCATTATACTACTACCCTTGTAGACTTCATGCGTGTCACTATTGCATCAAGTTCTTTCAAAGTG ATTAAATAAATTAATAATTTCTTGTAAATAACTAGGTTGACTTTATATATCACCTACTACGTTTTTGACACGGTTGTACA ATATAATTAGTATACATCTTTAATTATCAAATCGTTAATTTTAGGGTACTTTAGTTTATTACTTAGCAAGGTGCATGCAT ATATGTGTTTGACAAAACATTGAGTGCCAGCCATTTGATGTGTTTTGTCCATCTTAAAATGTTTAAATCACAAGTTGGTT TTAGACAATGATGCCTGGAATAGACCCCCACAAAAAATGAAAACAGTGATGGCTTGTTGTTTAATTAAGCATAAACCTCA AGTAGACTTTTAGTTATTAAAAATTTTAAACTAGATTTTCATATTGTTTCTTTAAATTAAATTCAAGTGCTATATAAATA TGAGCAATTTTATTATTAGACCATGTTAAAATCAATCCATGCACTCATAAACTATGTACCAATTATTTACAATATGTTTC TTATATGCTGAAATTAATTTGTAGAAAAACCATTTTATTTTATGAATTAATTTTTTCTTGATTAACGATAGGGAAAGTCA TAAAAGATGATATATTTATGTAAAATAAGTCTAGTTCATAGATAAGACAACCTCATAAGTTTCAACCCTATTGATAGCAT GTTGCTCTTGTCTATATGTGCTCCTAGCTAGATAAGGGGACCCATCTCATATGGTAGTTGGGGTTTGAAAATTGTTTGAT TCCACTTTTTATATTAATTACTTGACTGATTATTCATTAAAATATACTCTCAGCTCCCTTTGACTACTTGATTAATTGTT TTGATTAAAATTGTTTGTTTGTGAATTGAATTGAAGGCTGATAATTTGAGGCAACAGAGTATTCACCAATTATGTAGATT ACTGACAATTCGTCAAGCAGCAAGGTGTTTTGTTGTGATTGGAGAGTATTATGGTCGTCTTCGAGCTCTTAGTTCTCTCT GGGCATCAAGACCACGAGATCACCAGCAGTAAGCAGATCTAACACCATATACTAAGAAATTAAATACATTATTTTAATTT CAACATCTGAAATCTGTAACACTTCATCAATTGGTCAAAAGGATTAATTAATCCTTCTAAATGGGTTAAATACCTAGTTT TGCATTTCATCCTTTAAGTAAGTAGTCGGAGATTCAATTCTCATTTTTATGAATGAATTTTTTTTTATTAATCAGTCCTC TATCACATAGTCACTGATTGTGGGACAAATGATTCACGGGCTAATAATGACTGTGAGATAACCTTGATTAAGAAAAAAAT AGTCAAAATGAGTTTTTTCTTCTTCTTAACTTTACCACGTTTATTCAAGTTTCAACAACAAATCTTGTGTATCTCAAACT TCAAAATCTGCTTCATTGAAATGTGATACCCTAATTTTTTTAATTATATTTTTGTTCAACAGGACTTTGATCAGCGATGA TAACTCATGCCAAACAACCACGGAATTGCAAATGGTTCAATCTCACCAGGGTCATTTCTCTAATTTCTGAAGGATGTATA TGTAATTGACACTAGTTATATGTTAGCATGAAAGAGTGGATGTATCTTTGGGGCTGCTTTAGATGGAAAGAGTGTCAGCA TCATCAAGAATATATATTAATTTATTTTTCTTTTCTCTTTTTTATTTTAAATCCTCCACCCCTTTCGTGTAGACGTTTTA TTGTAAATGGAATTCAAGTTTAATGTGAATGATGAGGAATTGAAGCTTCTACTTGAGTTTAAAGTTTAAACTAATAAAAA GGACAATGCTTTTTAGGTCGTATTGAATTGGCATTGAGCATCCTGATATTTGATTATTAAGATTTTCCAGTAGCTTCCAA TGGGAAATAGAAATAGAAAATATTGGTTGACATACTCTAGAAGATGATTAATTGG
CDS sequence (LotjaGi3g1v0477400.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCGAGCCAAACAATCGGAGAAACCGGTTTGTCTGAGTCAGGGCCTTCAACTCACCATGTTCCTTATGGAGTTCTTCA TGGGATAACTACCTCTGCATCAGGATTAATTAATCAAGGGGAAGCTTTTGATTTTGGAGAGCTTGAAGAGGCAATTGTTC TCCAAGGATTTAAGATTAGAAATGATGAAGCCAAAGCAACTTTGTTCACAGGCAGGCCTGCAGCTACACTGGAAATGTTC CCTTCATGGCCAATGAGATTCCAACAAACAACACCAAGAGGAAGTTCAAAGTCAGGAGGGGAAAGCACTGAATCAGGATC AGGAATGAACACTCTTTCAACCAAAACTGAGCTTCAGTTTGAAACAGACTCTCCTACAAGTATAAAGGCATCTTCTTCAG ACCATCATCATGCTTTTGATCAGCATCACCTGCAGCTTCAACAGCAAAAACAACACCAACTTCAACATGAGAAGACTACT GATCATGATGCCTCAAAAGCTGACCCACCACAGAATCAACCAGCAGCAAAATCAGCTCAGGAAAAGAGGAAAGGAGCAGG TTCAACATCAGAAAAGCCACTTGATGCAAAGACACTAAGGCGTTTAGCTCAAAACAGAGAAGCTGCAAAGAAAAGCCGTC TCAGAAAAAAGGCTTATGTGCAGCAGCTAGAGTCAAGTAGGTTAAAACTCTCCCACCTTGAACAAGACCTTCAAAGATTG CGCTCCCAGGGACTGTTCTTGGGTTGTGGTGTTGCTGGTGGCAATTTAAGCTCTGGAGCTGCAATGTTTGACATGGAGTA CGCTAGGTGGTTAGAAGATGATCACCAGCACATGGCGGAGCTCCGTACGGGGCTGCAGGCGCCGTTGTCCGACAACGAAC TCAGAGTCATTGTGGATGGGTATCTGTATCACTATGATGAGCTTTTCCGGTTGAAGGGGGTGGCTGCAAAATCAGATGTT TTTCACCTCATTAATGGCATGTGGACTTCCCCAACTGAGCGATGCTTCCTCTGGATAGGTGGTTTTAGACCCTCAGAGCT CATCACAATGTTGATACAACAATTGGAGCCTTTGGCAGAGCAGCAAATAGTGGGCATATATGGTCTGAGGCATTCATCAC AACAAGCAGAAGAAGCTCTCTCACAGGGCCTCGAACAACTCCGCCATTTTCTCATTGACACGATCGCAGGTGCTCCTGTT GTCGACGGTGTGCAACAAATGGTCGTCGCCATGGGCAAGCTTGCCAACCTTGAAGGTTTTGTCCATCAGGCTGATAATTT GAGGCAACAGAGTATTCACCAATTATGTAGATTACTGACAATTCGTCAAGCAGCAAGGTGTTTTGTTGTGATTGGAGAGT ATTATGGTCGTCTTCGAGCTCTTAGTTCTCTCTGGGCATCAAGACCACGAGATCACCAGCAGACTTTGATCAGCGATGAT AACTCATGCCAAACAACCACGGAATTGCAAATGGTTCAATCTCACCAGGGTCATTTCTCTAATTTCTGA
Protein sequence (LotjaGi3g1v0477400.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MASQTIGETGLSESGPSTHHVPYGVLHGITTSASGLINQGEAFDFGELEEAIVLQGFKIRNDEAKATLFTGRPAATLEMF PSWPMRFQQTTPRGSSKSGGESTESGSGMNTLSTKTELQFETDSPTSIKASSSDHHHAFDQHHLQLQQQKQHQLQHEKTT DHDASKADPPQNQPAAKSAQEKRKGAGSTSEKPLDAKTLRRLAQNREAAKKSRLRKKAYVQQLESSRLKLSHLEQDLQRL RSQGLFLGCGVAGGNLSSGAAMFDMEYARWLEDDHQHMAELRTGLQAPLSDNELRVIVDGYLYHYDELFRLKGVAAKSDV FHLINGMWTSPTERCFLWIGGFRPSELITMLIQQLEPLAEQQIVGIYGLRHSSQQAEEALSQGLEQLRHFLIDTIAGAPV VDGVQQMVVAMGKLANLEGFVHQADNLRQQSIHQLCRLLTIRQAARCFVVIGEYYGRLRALSSLWASRPRDHQQTLISDD NSCQTTTELQMVQSHQGHFSNF
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 31 | 480 | 450 | 1.6E-210 | – | |
| PANTHER | 31 | 480 | 450 | 1.6E-210 | – | |
| MobiDBLite | 81 | 199 | 119 | - | – | |
| MobiDBLite | 83 | 132 | 50 | - | – | |
| MobiDBLite | 184 | 199 | 16 | - | – | |
| SMART | 193 | 269 | 77 | 9.7E-7 | ||
| ProSiteProfiles | 195 | 239 | 45 | 8.979 | ||
| Pfam | 196 | 237 | 42 | 8.9E-8 | ||
| Gene3D | 197 | 245 | 49 | 2.1E-9 | – | |
| CDD | 197 | 248 | 52 | 9.07268E-22 | – | |
| SUPERFAMILY | 197 | 237 | 41 | 1.0E-6 | – | |
| ProSitePatterns | 200 | 215 | 16 | - | ||
| Coils | 216 | 243 | 28 | - | – | |
| ProSiteProfiles | 260 | 468 | 209 | 30.005 | ||
| Pfam | 277 | 352 | 76 | 2.0E-29 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | DNA-binding transcription factor activity | A protein or a member of a complex that interacts selectively and non-covalently with a specific DNA sequence (sometimes referred to as a motif) within the regulatory region of a gene to modulate transcription. Regulatory regions include promoters (proximal and distal) and enhancers. Genes are transcriptional units, and include bacterial operons. | ||
| Biological process | Transcription, DNA-templated | The cellular synthesis of RNA on a template of DNA. | ||
| Biological process | Regulation of transcription, DNA-templated | Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription. | ||
| Molecular function | Sequence-specific DNA binding | Interacting selectively and non-covalently with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding. |
Expression pattern of LotjaGi3g1v0477400.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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