Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0477600 |
| Transcript ID | LotjaGi3g1v0477600.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Alpha/beta-Hydrolases superfamily protein; TAIR: AT3G44510.2 alpha/beta-Hydrolases superfamily protein; Swiss-Prot: sp|Q8LFX7|BDG1_ARATH Probable lysophospholipase BODYGUARD 1; TrEMBL-Plants: tr|A0A0R0HCH5|A0A0R0HCH5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0477600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:89400848..89404143) extracted from Lotus japonicus Gifu genome v1.2.
GCTAATATCTACATAATTTAAAGAGGATTAAAAGTTGGAGCAAATAACAATCTGACACAGCTTTCAGTGTAAAGCCAAGT AGACAGACCCTTTGGTCCAGTCTGTGAAAGCTAACAACATGAAATGTTTGAAGCACAATAAGAAGATGCTATGGAATCAG AAGGGTCAAGCCAACAAATATGCTGCTGTCTAATGGAACCTTGAAGAGGATATTCACCAACTTACACAGTTTTAAAAAGT CAAAGCTTCATCTTTAAGGACTCAAATTCAGCTAATCACTCCCCCATTAATGCAGAAAGGGTACCTAAGATCTACAAGTC AAAAGCAGAGGAAAAACTAAGGAAAGCATCTTTAGCTCATTGATTGAAAATTTGAAATCCTTCATTCTCTGACACACATC TGTGACAGGTAAGCATCTTAGTGTTTTTTATGTCTAAACAGAACATCCCATGTGGTCATTGTACTTAAAAAAAGTTTCAA AGATGAGATCTACCCTTTATTATTATTCCTTCAGGGATGGTTTCAAGAGCAGCAATAGTGTTACTCATGGGTCTTCTGGG AATGGTTTATCAGGGAACTCAACTTCCCCCTAATGATTCTGCTATTACTCCTGTGGTTTCACCAAGAATCAGACTCAGAG ATGGAAGGTACATGGCTTACAGAGAAAGGGGCGTCCCCAAGGAGAAAGCAAAACACAGCATCATCATTGTTCATGGATTT GGAAGCTCCAAGGATATGAACTTTCAGGCACCCCAAGTACATGCCTCAATTTTTTTACTTTTTTTCTGAAAACTTGCTTA TATATTGATCTGAAAATAGTGGTCATGGTGTTTGATCAATGGATTTAGATCCAATTAGCACAGTAGCTAAGAATGTTTGC AAGGAAATATGTGGAATAGATTCAAAATGCTAGGAGTACTATGCACAAATTAGTTCATGTTGTAGTTCTGATTAGACACT TGCATAAAACAATAGGTTTGTATTTGTCTTTTTATTGAGCCTTTTTAAAGTGTATTGGATTCTGAGTTTGGAAGCATATT TTCAATACATGAGGCTTATAGCATGTTTGCTATCAGCTTATATTTCCTCATAATCAATTATGGCGGTCAGAAACCACTCA TAGAAGCTTCTCTCTAGAATCAATTTTGCATTTAAAATCAACGTAGAAAGATTTCCAAATATGCACTTAGACTTCGTTTA AGAAAGGTTACTTAGAGCAAGCGCTTATGCAAATGCTTGGAAGAGCTTATGAAAAAAGCTATAGCCTACCTATAACTATT ATTGAGCTTATTTCCATAAGTTATTCAAATTACCTTATGAATTAAAGTTTATGCTGTAACTTATTTTCAACTTATTTCAA TAAGTTTTTCAAACTGCCTTATGAATAAGTGCTTATACGATAAATGCTTATTGACGTAAGTGCTTGATCAAGTTTTTTGC ACAAACACACTCTTAGATATGTTTAAAAGTTGCACTGCTACCCATTTAAATATGACAACTAAGATAACATTGACACTGAA TCTGCAGGAACTGATAGATAAGTTGAATATACATATTGTGCAATATGATCGAGCTGGTTATGGAGAAAGTGATCCATACC CCAAACGCTCATTGGAAAGTGAAGCACTTGATATTGAAGAGCTTGCAGATCAATTGCAGATAGGATCAAAATTTTATGTG ATTGGAGTCTCAATGGGGTCATATGCTGCCTGGAGTTGTCTGCACTACATCCCAAACAGGCAAATTTCAAGCCTCAAAAT ATGTATTACTATGTTTTCCCATATGAATATCGTTGGTAATTTTTTTACAATAAAAGTGAGTTGAAAGTGAAGTAATTTAT GTTTGGATATGTTTAAAGAAAAAAAGTGATTTTTATGAGGTAATGTTATGAAATTCGTTTATGAAATCTCACAATTGATT ATTTCTACTGCATAAGCTTCTCCCTGATCTCATAATCTATTCACTAAATCAAATGTTAAACATCTATAAATAGTCTTAAT TTCATCACTAGTTCAACATTTTTGCAGGCTAGCAGGGGTGGCTATGATAGCCCCAATCATCAACTATAAGTGGCCTTCTC TTCCTGAGAGTCTGGTAAAGGATGACTATAGGAGGAAATTGGTCAAATTTTCTCTGTGGCTTGCAATCTATACACCTAAA CTTTTGCACTGGTGGGTGTCTCAAAAGTGGCTCCCTTCAAATTCTGTCATAGAAAAAAATCCTGCATTCTTCAACGGAAG AGATATAGATATTTTAAAAAGAATTCCAGGGTTCCCAATGCTTACTAAGGTAAATTCCATGTTTCTTTTAACCTGTTTTA TGTGAATATAAAATACTAAACAATAAATATAGCAAAAGACAAAACTTAAATACAGTATTATAGGTGCTAAGTATTATCTC ATAAATATTTTTGAAGAGTCTCACATATATTCACATATTTAATGCACATAAAGAAAGAGATTGATACAAAAGTCAACATA AAAGAGTTTTCACATGAGATAATATGATCCATTCACCGTATAATACTGTGCATAAATTTTGTCCTATTGTAAATACCTCC TCTATGAAGACAATTGTAATGACTCCATGTTCCCACTTACTCAGGACAAGTTGAGGGACCAGGTAGTTTTTGACACTCTC AGGGGTGACTGGCTGGTGGCATTTGGAAACTGGGAATTTGATCCAATGAAGCTAAGTAGTCCATTCCCTCATAATAAAAG TTCAGTTCATATTTGGCAGGGCTATGAAGATAAGGTGGTGCCCTCTAAAATCCAGAGATATGTTTCAGAGAAACTTCCTT GGATACAATATCATGAAGTTCCTGATGGTGGCCATTTAGTTGTACACTATAGTGGTATATTTGAGGCTATTTTGAAGGCC CTTTTACTCGGGGAAGAAAATCTTTCATATAAACCTAGACCAGCAATATCTGTATCTTGATTTGCCATGATCTCATAGTC TAATATGTTTATTTTTGATTTATTTTTTAGGGGAATGTTAAAGATGTAAAGCACATTCTTTGGTTGAAAGGAGGGAAATC TCAAATATGTAAATTATACACACTTTTAAATAATGTTCATTTGATATTATCTTTTCTTTTTTTCTTTGTTGATCTAAGCT TCATAAAATTAAAGTCTAAGTCAAGTGAAATGAATAGAGAGTAATCAAACTTTAATGAAAGCACCACAGCTGAACACCAC AAGTTCACATTACAATACAAGTCCCTTTGCTCTGATCCACCTACAATATTGGAAAGCTTAAAGGAAAAAATAAGAGAAAA ATTATTCAGTCACCAC
CDS sequence (LotjaGi3g1v0477600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTTTCAAGAGCAGCAATAGTGTTACTCATGGGTCTTCTGGGAATGGTTTATCAGGGAACTCAACTTCCCCCTAATGA TTCTGCTATTACTCCTGTGGTTTCACCAAGAATCAGACTCAGAGATGGAAGGTACATGGCTTACAGAGAAAGGGGCGTCC CCAAGGAGAAAGCAAAACACAGCATCATCATTGTTCATGGATTTGGAAGCTCCAAGGATATGAACTTTCAGGCACCCCAA GAACTGATAGATAAGTTGAATATACATATTGTGCAATATGATCGAGCTGGTTATGGAGAAAGTGATCCATACCCCAAACG CTCATTGGAAAGTGAAGCACTTGATATTGAAGAGCTTGCAGATCAATTGCAGATAGGATCAAAATTTTATGTGATTGGAG TCTCAATGGGGTCATATGCTGCCTGGAGTTGTCTGCACTACATCCCAAACAGGCTAGCAGGGGTGGCTATGATAGCCCCA ATCATCAACTATAAGTGGCCTTCTCTTCCTGAGAGTCTGGTAAAGGATGACTATAGGAGGAAATTGGTCAAATTTTCTCT GTGGCTTGCAATCTATACACCTAAACTTTTGCACTGGTGGGTGTCTCAAAAGTGGCTCCCTTCAAATTCTGTCATAGAAA AAAATCCTGCATTCTTCAACGGAAGAGATATAGATATTTTAAAAAGAATTCCAGGGTTCCCAATGCTTACTAAGGACAAG TTGAGGGACCAGGTAGTTTTTGACACTCTCAGGGGTGACTGGCTGGTGGCATTTGGAAACTGGGAATTTGATCCAATGAA GCTAAGTAGTCCATTCCCTCATAATAAAAGTTCAGTTCATATTTGGCAGGGCTATGAAGATAAGGTGGTGCCCTCTAAAA TCCAGAGATATGTTTCAGAGAAACTTCCTTGGATACAATATCATGAAGTTCCTGATGGTGGCCATTTAGTTGTACACTAT AGTGGTATATTTGAGGCTATTTTGAAGGCCCTTTTACTCGGGGAAGAAAATCTTTCATATAAACCTAGACCAGCAATATC TGTATCTTGA
Protein sequence (LotjaGi3g1v0477600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVSRAAIVLLMGLLGMVYQGTQLPPNDSAITPVVSPRIRLRDGRYMAYRERGVPKEKAKHSIIIVHGFGSSKDMNFQAPQ ELIDKLNIHIVQYDRAGYGESDPYPKRSLESEALDIEELADQLQIGSKFYVIGVSMGSYAAWSCLHYIPNRLAGVAMIAP IINYKWPSLPESLVKDDYRRKLVKFSLWLAIYTPKLLHWWVSQKWLPSNSVIEKNPAFFNGRDIDILKRIPGFPMLTKDK LRDQVVFDTLRGDWLVAFGNWEFDPMKLSSPFPHNKSSVHIWQGYEDKVVPSKIQRYVSEKLPWIQYHEVPDGGHLVVHY SGIFEAILKALLLGEENLSYKPRPAISVS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 4 | 4 | - | – | |
| Phobius | 1 | 19 | 19 | - | – | |
| SignalP_EUK | 1 | 22 | 22 | - | – | |
| PANTHER | 5 | 338 | 334 | 3.6E-183 | – | |
| PANTHER | 5 | 338 | 334 | 3.6E-183 | – | |
| Phobius | 5 | 14 | 10 | - | – | |
| Phobius | 15 | 19 | 5 | - | – | |
| Phobius | 20 | 349 | 330 | - | – | |
| Gene3D | 27 | 331 | 305 | 1.4E-36 | ||
| SUPERFAMILY | 30 | 318 | 289 | 3.74E-37 | ||
| Pfam | 62 | 319 | 258 | 8.6E-14 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0477600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…