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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0479500 |
| Transcript ID | LotjaGi3g1v0479500.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | MAR-binding filament-like protein 1-1; TAIR: AT3G16000.1 MAR binding filament-like protein 1; Swiss-Prot: sp|Q9M7J4|MFP1_TOBAC MAR-binding filament-like protein 1-1; TrEMBL-Plants: tr|G7JKW2|G7JKW2_MEDTR MAR-binding filament-like protein, putative; Found in the gene: LotjaGi3g1v0479500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:89616426..89620265) extracted from Lotus japonicus Gifu genome v1.2.
AAATTGAATAACCACCACTAGCCTATTCACTCACACACCAACACCATCTGTTGTCTTGTATGTGGCACACTGAGACCGAG CAAAGAATCTCCGAAAGATGGGGTTTCTTGCAGCAGCGAGTAGCAGCACCTTCTGCTTGCTGCATTCTCCTCCTCTCTAC CAATTTCCATTCCCTTCTTCTTCATCTTGTTCTTCTTCTTCTTGGCCTAGAAATGCCGCACGTTTCAAGACTCAGTTCCG AGCTCCCACAGCATCGTCCTTGCGCCAACACGACCCAATCTGCAGCAAGAGGACATTTCTCTTGATGGGTATTGCTGTTC TTCCACTTCTACCATTCAACACTGCTCAAGCTCTTGAAGGGTCTTCCGCTACCACAAGTAAGTTTTCATCTTCGGAATCA TCATCACTGTAGTTGCTATTTATGTAAACTTGTTATTTATGGACCAATTCACTTTGCTATTATGGTGATTTGTATCTATA TTCTTTATCATTCTTTCTTGTTCTTTTGTCATGTAGTGCTTAATTCAAACATTTCAATTGGTTTGATCATTTTTCTATCA CAATTAAATTAAAATTAAGAAGATGACAAAAAAAAATGCAAGATTGAAATGTATTACAATCCCATTTGCTAATTTAAAAG CAATGGCTGATTGTTTGATGTCTATTGCAATATACCATTAGACTTCCATCAATAGGTCAAAATAGGAGATCAACTTCTTG AGGACCACCTTATGTATATGCATGCATTGTTTACTTCCTTGGGAAAAATGAATTTTAGGCACCTCAGGTGTTGTGCTGCA TTTTGTTTTCCACATCCTTGTTGAGATGGAGAGTGCAATTTGTTACTTGTTTAATTGTTTAGTATAGCATTATAGTCTTC ATTTTTGTAGTAAATGTGTGATTGTTCATTCTACTTTCAGAAGAAAGTGAGGTGAAGACATCAGAGGATAGCCCGAAAGC ACAGGTTTGTTTGCTGTTAAGTTTTCAGATACAAATGTTAAATATGCAGTTTCTGCTTGTCCTTTTGGATGTTCAATGTG TTCTGAACTTGTAGCTTCTATTGACAGACAAATTCCTTTGCGTCTCTCCTGAATGCAATTGGAATATTTTCTGCTGGCGT GTTGGGTGCTCTCTATGCACTAGCTCAGAAAGAAAAGTCCACTGCTGATGCAACAATAGAAACAGTAAGCTTACAAGCAC TTCTATGATTCTTGGCCTTTGATGAATGTCTGTCTTCTAAACAAACTCGTATAGTTATAAAAAGGGAAATGAGGGAGTAT TCTTCTCTTTCTCCTGTTTCTAAAGAAATGACAGTGATTAGTTCTTTTCCAACCAATTTGATTTTAAATGGTTATTTTTT TCTTTTCTAAAATATCAGTTTTAGAGTATTTTCATTTTAGGTTGTAAGCCTTATATTTTACTGGTCATTGTGCACAGATG AGCATCAAACTTAAGGAAAAGGAAGAGAAGATAGTATCCTTGAAGAGAAACTATGAATTGAAGTTACAGAATGAGCAGGA AGAACGAGCCAAGCTACTTGGAAAAGCAAAGGAAGAACAGCAAGCATTGACAAACCAGCTAAATTCCGCAATCAGTACTG TCACCCGTGTGGGTCAGGAGCTAAAAAGCGAGAAAAGTTTGATTGAGGAGCTGAAACTTCAAATTGACAGACTTGAAACT AAGCTTTCAAAGGCTGATACAGATAAGAAGGGTCTTGAAGACAATTTGAAAGAGAAGGTTGATTCTATTGAAATTTTACA GAAAAAAATTGATCTGCTGAGTGCAGACCTCAAGGACAAAGAAGTTGTTGTTCAGAATCTAAATTCATCCCTGGCAGAAA AGGAGTTGGAATTGAGGAATTTGAATTCTACCTATGAGCAAACCAAGGAGGAATTATCTAATGCTTATTTGCAGATTCAG GAGTTGAAAGATGAACTACTAAAAAGCCAAAAAGAACTAGAGGGAAAAGATTCCTTGGTGATGGCACTAAATTCAAGAGT AAATTCCTTAACACTTGAGAATGATGGTTTTAAGAGTAAATGTGATGTCATGGAGAAGGAATACAGTGACCTAAAGTTGT CTGCTGAAAAGAAGGCTGATTTGGATGCTAAGATTTTAATAGAAAAAGAAGAGGAGCTTCATCAGCTAAAGGATAAATTA GAACTGGCGATAGATGAAACAGGCAGAAACAAGGCCATCATTGCTGATTTAGAGCAACAAAGACAAGGTTTAAAGGAGTC TCTAGAGAATGAATCTAGGGAAGTGAACAATCTGAAGCATGAACTCCAAGTCGCTCAGGAGAACCTTGGAAAATCAAGGA ATGAGTCTGCTGAATTGGAGAAAAGTCTAAACAAGTCAAATGAATTGCGCAAAGAGCTCGAGCTTGAGGTCTCTAAGCTT TCATCTGAGCTCACTGAAGTTAAAGAGTCACTACAGGAAAAACTTGATGATGCAAAACTCGGGGCAGAAATGCTAGCTAG TGAGCTTACGACAGCAAAGGAACATTTGAATAAATCACAAGCACAGCTCCAAAGTATGTCTGATGAATTAACAGCTACTC TTGAAAACCGTAGTAGCCTACAAAGAGAATTAACTGATGTCTACAAAAAGGCTGAAACCACAGCAATGGATTTGAAGGAA GAAAAACAGTTAGTTGCTTCTTTGTACCAAGATCTACAAGCTTTGGAGAAGCAAGTCTCAAAGGACAAGGAGGCTCAAAG ATCTCTCGAAATGGATTTAGAGGAGGCTGCCAAATCTCTAGATGAAATGAACAGACATGCATTGACCCTTACTAGTGAAT TAGAGAGGAGTCAGTCTCTTATTTCTAGCCTTGAGAATGAGAAAGAGGTGCTTTCCAAGTCTCTCAGTGAACAAAGAAAA GCAAGCAAAGAGGCCCGGGAAAACATTGAAGATGCTCATAACCTCATCATGAGACTTGGCAAAGAGAGAGAGACTTTGGA TAGCAGAGGGAAGAAATTAGAGGAGGAGTTGGCTTCTGCCAAGGGTGAAATATTGCGTTTGAGGAGTCAGATCAATTCTT CAAAAGTTGCTGTTAGCAATGAGAAGCCTTTGAACAATGAGAAAGTGCAGAAAGATGAAGGTGAAACCAAGGTGAACACT GAGAAAGTGCAGAAAGATGAAGGTGAAACCAAGGTCACTGTAACTGCACGGAAAACTGGCCGAAGGAGAAAGGCTAATCC CCAATAATATAGAGAAACTTGAGAGGCATTAAAAAATTCTGTTTAGCAGAGTGATATTCTATAATGAACCATTTAGAATG CAGTTGATATTGCACTTTAATAATCTCTTTGACATGCACTAGTTTCCATGTTGCTATAGCATTGTACAGATTCAGTAACA TTGTAGGAATTGTTGAGGCAAGCTTTTTGGAGTGTTGATTTTTAGTAACCCCTGAAGAAAGTGAGAATATTAGGTATTGT TTGAGCCCGATTGGATGCAAACAAAAAATCTCTTATTGGAGCTCATTTAGTGTTTTTTTAAGTAGATAAGCTCTAATAAG CTGGTAACCAAACATGGTTACAACATTGAAAAACTGTTTGGTGTATATGCCTCCAGTGTTCCTTGTCTATCAGGAAAATC AATTTGCTTGCAACTAACATTTTTCTGATAGTGTACCATTTGGGTTTATTCTCTTTCCCACTTACAACCTCTTGTCCTTG TTTGCATTTGTCACATACTTTTTTACCATCGAGTGCAATATGTTAAATTATCATCGATTGCGGCACATTGTAGAGCATAT GGCAGACTAGAACTTTTTATGCTTTATCATTTCCAAGCACGTGATGAATCATAGCATGTTATTGTAAGGATGAAAAAATG
CDS sequence (LotjaGi3g1v0479500.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGGTTTCTTGCAGCAGCGAGTAGCAGCACCTTCTGCTTGCTGCATTCTCCTCCTCTCTACCAATTTCCATTCCCTTC TTCTTCATCTTGTTCTTCTTCTTCTTGGCCTAGAAATGCCGCACGTTTCAAGACTCAGTTCCGAGCTCCCACAGCATCGT CCTTGCGCCAACACGACCCAATCTGCAGCAAGAGGACATTTCTCTTGATGGGTATTGCTGTTCTTCCACTTCTACCATTC AACACTGCTCAAGCTCTTGAAGGGTCTTCCGCTACCACAAAAGAAAGTGAGGTGAAGACATCAGAGGATAGCCCGAAAGC ACAGACAAATTCCTTTGCGTCTCTCCTGAATGCAATTGGAATATTTTCTGCTGGCGTGTTGGGTGCTCTCTATGCACTAG CTCAGAAAGAAAAGTCCACTGCTGATGCAACAATAGAAACAATGAGCATCAAACTTAAGGAAAAGGAAGAGAAGATAGTA TCCTTGAAGAGAAACTATGAATTGAAGTTACAGAATGAGCAGGAAGAACGAGCCAAGCTACTTGGAAAAGCAAAGGAAGA ACAGCAAGCATTGACAAACCAGCTAAATTCCGCAATCAGTACTGTCACCCGTGTGGGTCAGGAGCTAAAAAGCGAGAAAA GTTTGATTGAGGAGCTGAAACTTCAAATTGACAGACTTGAAACTAAGCTTTCAAAGGCTGATACAGATAAGAAGGGTCTT GAAGACAATTTGAAAGAGAAGGTTGATTCTATTGAAATTTTACAGAAAAAAATTGATCTGCTGAGTGCAGACCTCAAGGA CAAAGAAGTTGTTGTTCAGAATCTAAATTCATCCCTGGCAGAAAAGGAGTTGGAATTGAGGAATTTGAATTCTACCTATG AGCAAACCAAGGAGGAATTATCTAATGCTTATTTGCAGATTCAGGAGTTGAAAGATGAACTACTAAAAAGCCAAAAAGAA CTAGAGGGAAAAGATTCCTTGGTGATGGCACTAAATTCAAGAGTAAATTCCTTAACACTTGAGAATGATGGTTTTAAGAG TAAATGTGATGTCATGGAGAAGGAATACAGTGACCTAAAGTTGTCTGCTGAAAAGAAGGCTGATTTGGATGCTAAGATTT TAATAGAAAAAGAAGAGGAGCTTCATCAGCTAAAGGATAAATTAGAACTGGCGATAGATGAAACAGGCAGAAACAAGGCC ATCATTGCTGATTTAGAGCAACAAAGACAAGGTTTAAAGGAGTCTCTAGAGAATGAATCTAGGGAAGTGAACAATCTGAA GCATGAACTCCAAGTCGCTCAGGAGAACCTTGGAAAATCAAGGAATGAGTCTGCTGAATTGGAGAAAAGTCTAAACAAGT CAAATGAATTGCGCAAAGAGCTCGAGCTTGAGGTCTCTAAGCTTTCATCTGAGCTCACTGAAGTTAAAGAGTCACTACAG GAAAAACTTGATGATGCAAAACTCGGGGCAGAAATGCTAGCTAGTGAGCTTACGACAGCAAAGGAACATTTGAATAAATC ACAAGCACAGCTCCAAAGTATGTCTGATGAATTAACAGCTACTCTTGAAAACCGTAGTAGCCTACAAAGAGAATTAACTG ATGTCTACAAAAAGGCTGAAACCACAGCAATGGATTTGAAGGAAGAAAAACAGTTAGTTGCTTCTTTGTACCAAGATCTA CAAGCTTTGGAGAAGCAAGTCTCAAAGGACAAGGAGGCTCAAAGATCTCTCGAAATGGATTTAGAGGAGGCTGCCAAATC TCTAGATGAAATGAACAGACATGCATTGACCCTTACTAGTGAATTAGAGAGGAGTCAGTCTCTTATTTCTAGCCTTGAGA ATGAGAAAGAGGTGCTTTCCAAGTCTCTCAGTGAACAAAGAAAAGCAAGCAAAGAGGCCCGGGAAAACATTGAAGATGCT CATAACCTCATCATGAGACTTGGCAAAGAGAGAGAGACTTTGGATAGCAGAGGGAAGAAATTAGAGGAGGAGTTGGCTTC TGCCAAGGGTGAAATATTGCGTTTGAGGAGTCAGATCAATTCTTCAAAAGTTGCTGTTAGCAATGAGAAGCCTTTGAACA ATGAGAAAGTGCAGAAAGATGAAGGTGAAACCAAGGTGAACACTGAGAAAGTGCAGAAAGATGAAGGTGAAACCAAGGTC ACTGTAACTGCACGGAAAACTGGCCGAAGGAGAAAGGCTAATCCCCAATAA
Protein sequence (LotjaGi3g1v0479500.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGFLAAASSSTFCLLHSPPLYQFPFPSSSSCSSSSWPRNAARFKTQFRAPTASSLRQHDPICSKRTFLLMGIAVLPLLPF NTAQALEGSSATTKESEVKTSEDSPKAQTNSFASLLNAIGIFSAGVLGALYALAQKEKSTADATIETMSIKLKEKEEKIV SLKRNYELKLQNEQEERAKLLGKAKEEQQALTNQLNSAISTVTRVGQELKSEKSLIEELKLQIDRLETKLSKADTDKKGL EDNLKEKVDSIEILQKKIDLLSADLKDKEVVVQNLNSSLAEKELELRNLNSTYEQTKEELSNAYLQIQELKDELLKSQKE LEGKDSLVMALNSRVNSLTLENDGFKSKCDVMEKEYSDLKLSAEKKADLDAKILIEKEEELHQLKDKLELAIDETGRNKA IIADLEQQRQGLKESLENESREVNNLKHELQVAQENLGKSRNESAELEKSLNKSNELRKELELEVSKLSSELTEVKESLQ EKLDDAKLGAEMLASELTTAKEHLNKSQAQLQSMSDELTATLENRSSLQRELTDVYKKAETTAMDLKEEKQLVASLYQDL QALEKQVSKDKEAQRSLEMDLEEAAKSLDEMNRHALTLTSELERSQSLISSLENEKEVLSKSLSEQRKASKEARENIEDA HNLIMRLGKERETLDSRGKKLEEELASAKGEILRLRSQINSSKVAVSNEKPLNNEKVQKDEGETKVNTEKVQKDEGETKV TVTARKTGRRRKANPQ
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 3 | 3 | - | – | |
| Phobius | 1 | 33 | 33 | - | – | |
| Phobius | 4 | 15 | 12 | - | – | |
| Phobius | 16 | 33 | 18 | - | – | |
| PANTHER | 24 | 735 | 712 | 4.0E-200 | – | |
| PANTHER | 24 | 735 | 712 | 4.0E-200 | – | |
| Phobius | 34 | 736 | 703 | - | – | |
| Coils | 145 | 190 | 46 | - | – | |
| Coils | 209 | 327 | 119 | - | – | |
| SUPERFAMILY | 334 | 543 | 210 | 7.19E-5 | – | |
| Coils | 374 | 394 | 21 | - | – | |
| Coils | 402 | 678 | 277 | - | – | |
| MobiDBLite | 611 | 636 | 26 | - | – | |
| MobiDBLite | 618 | 636 | 19 | - | – | |
| MobiDBLite | 678 | 736 | 59 | - | – | |
| MobiDBLite | 678 | 692 | 15 | - | – | |
| MobiDBLite | 693 | 724 | 32 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0479500.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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