Domain Predictions — View

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PTHR43939

Source: PANTHER

Description

No description is available for this domain.

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 18

Transcript	Name	Description	Predicted domains	Domain count
LotjaGi3g1v0479500.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	MAR-binding filament-like protein 1-1; TAIR: AT3G16000.1 MAR binding filament-like protein 1; Swiss-Prot: sp\|Q9M7J4\|MFP1_TOBAC MAR-binding filament-like protein 1-1; TrEMBL-Plants: tr\|I1LRE3\|I1LRE3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0479500	Domains Coil PTHR43939 PTHR43939:SF34 SSF57997 mobidb-lite	6
LotjaGi3g1v0479500.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	MAR-binding filament-like protein 1-1; TAIR: AT3G16000.1 MAR binding filament-like protein 1; Swiss-Prot: sp\|Q9M7J4\|MFP1_TOBAC MAR-binding filament-like protein 1-1; TrEMBL-Plants: tr\|G7JKW2\|G7JKW2_MEDTR MAR-binding filament-like protein, putative; Found in the gene: LotjaGi3g1v0479500	Domains Coil NON_CYTOPLASMIC_DOMAIN PTHR43939 PTHR43939:SF34 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF57997 mobidb-lite	11
LotjaGi4g1v0139100.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Structural maintenance of chromosomes protein; TAIR: AT5G48600.2 structural maintenance of chromosome 3; Swiss-Prot: sp\|Q9FJL0\|SMC4_ARATH Structural maintenance of chromosomes protein 4; TrEMBL-Plants: tr\|A0A151RK13\|A0A151RK13_CAJCA Structural maintenance of chromosomes protein 4; Found in the gene: LotjaGi4g1v0139100	Domains Coil G3DSA:1.20.1060.20 G3DSA:3.30.70.1620 G3DSA:3.40.50.300 IPR003395 IPR010935 IPR024704 IPR027417 IPR036277 IPR041738 PF02463 PF06470 PIRSF005719 PTHR43939 PTHR43939:SF1 SM00968 SSF52540 SSF75553 cd03274 mobidb-lite	20
LotjaGi4g1v0139100.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Structural maintenance of chromosomes protein; TAIR: AT5G48600.1 structural maintenance of chromosome 3; Swiss-Prot: sp\|Q9FJL0\|SMC4_ARATH Structural maintenance of chromosomes protein 4; TrEMBL-Plants: tr\|I1LWK5\|I1LWK5_SOYBN Structural maintenance of chromosomes protein; Found in the gene: LotjaGi4g1v0139100	Domains G3DSA:3.40.50.300 IPR003395 IPR027417 IPR041738 PF02463 PTHR43939 PTHR43939:SF1 SSF52540 cd03274	9
LotjaGi4g1v0139100.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Structural maintenance of chromosomes protein; TAIR: AT5G48600.2 structural maintenance of chromosome 3; Swiss-Prot: sp\|Q9FJL0\|SMC4_ARATH Structural maintenance of chromosomes protein 4; TrEMBL-Plants: tr\|A0A151RK13\|A0A151RK13_CAJCA Structural maintenance of chromosomes protein 4; Found in the gene: LotjaGi4g1v0139100	Domains Coil G3DSA:1.20.1060.20 G3DSA:3.30.70.1620 G3DSA:3.40.50.300 IPR003395 IPR010935 IPR027417 IPR036277 IPR041738 PF02463 PF06470 PTHR43939 PTHR43939:SF1 SM00968 SSF52540 SSF75553 cd03274 mobidb-lite	18
LotjaGi4g1v0139100.4 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Structural maintenance of chromosomes protein; TAIR: AT5G48600.2 structural maintenance of chromosome 3; Swiss-Prot: sp\|Q9FJL0\|SMC4_ARATH Structural maintenance of chromosomes protein 4; TrEMBL-Plants: tr\|A0A151RK13\|A0A151RK13_CAJCA Structural maintenance of chromosomes protein 4; Found in the gene: LotjaGi4g1v0139100	Domains Coil G3DSA:1.20.1060.20 G3DSA:3.30.70.1620 G3DSA:3.40.50.300 IPR003395 IPR010935 IPR024704 IPR027417 IPR036277 IPR041738 PF02463 PF06470 PIRSF005719 PTHR43939 PTHR43939:SF1 SM00968 SSF52540 SSF75553 cd03274 mobidb-lite	20
LotjaGi4g1v0139100.5 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Structural maintenance of chromosomes protein; TAIR: AT5G48600.2 structural maintenance of chromosome 3; Swiss-Prot: sp\|Q9FJL0\|SMC4_ARATH Structural maintenance of chromosomes protein 4; TrEMBL-Plants: tr\|A0A151RK13\|A0A151RK13_CAJCA Structural maintenance of chromosomes protein 4; Found in the gene: LotjaGi4g1v0139100	Domains Coil G3DSA:1.20.1060.20 G3DSA:3.30.70.1620 G3DSA:3.40.50.300 IPR003395 IPR010935 IPR024704 IPR027417 IPR036277 IPR041738 PF02463 PF06470 PIRSF005719 PTHR43939 PTHR43939:SF1 SM00968 SSF52540 SSF75553 cd03274 mobidb-lite	20
LotjaGi4g1v0139100.6 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Structural maintenance of chromosomes protein; TAIR: AT5G48600.2 structural maintenance of chromosome 3; Swiss-Prot: sp\|Q9FJL0\|SMC4_ARATH Structural maintenance of chromosomes protein 4; TrEMBL-Plants: tr\|K7LXH6\|K7LXH6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0139100	Domains Coil G3DSA:1.20.1060.20 G3DSA:3.30.70.1620 G3DSA:3.40.50.300 IPR003395 IPR010935 IPR024704 IPR027417 IPR036277 IPR041738 PF02463 PF06470 PIRSF005719 PTHR43939 PTHR43939:SF1 SM00968 SSF52540 SSF75553 cd03274 mobidb-lite	20
LotjaGi4g1v0139100.7 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Structural maintenance of chromosomes protein; TAIR: AT5G48600.1 structural maintenance of chromosome 3; Swiss-Prot: sp\|Q9FJL0\|SMC4_ARATH Structural maintenance of chromosomes protein 4; TrEMBL-Plants: tr\|A0A0R0I695\|A0A0R0I695_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0139100	Domains G3DSA:3.40.50.300 IPR003395 IPR027417 PF02463 PTHR43939 PTHR43939:SF1 SSF52540	7
LotjaGi4g1v0139100.8 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Structural maintenance of chromosomes protein; TAIR: AT5G48600.1 structural maintenance of chromosome 3; Swiss-Prot: sp\|Q9FJL0\|SMC4_ARATH Structural maintenance of chromosomes protein 4; TrEMBL-Plants: tr\|A0A151RK13\|A0A151RK13_CAJCA Structural maintenance of chromosomes protein 4; Found in the gene: LotjaGi4g1v0139100	Domains G3DSA:3.40.50.300 IPR003395 IPR027417 IPR041738 PF02463 PTHR43939 PTHR43939:SF1 SSF52540 cd03274	9
LotjaGi5g1v0066800.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Nucleoporin; TAIR: AT4G31570.2 nucleoporin; Swiss-Prot: sp\|Q5B993\|ATG11_EMENI Autophagy-related protein 11; TrEMBL-Plants: tr\|G7I5R4\|G7I5R4_MEDTR Viral A-type inclusion protein, putative; Found in the gene: LotjaGi5g1v0066800	Domains CYTOPLASMIC_DOMAIN Coil NON_CYTOPLASMIC_DOMAIN PTHR43939 PTHR43939:SF13 TMhelix TRANSMEMBRANE mobidb-lite	9
LotjaGi5g1v0066800.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Nucleoporin; TAIR: AT4G31570.4 nucleoporin; Swiss-Prot: sp\|Q5B993\|ATG11_EMENI Autophagy-related protein 11; TrEMBL-Plants: tr\|W9SK78\|W9SK78_9ROSA Uncharacterized protein; Found in the gene: LotjaGi5g1v0066800	Domains CYTOPLASMIC_DOMAIN Coil NON_CYTOPLASMIC_DOMAIN PTHR43939 PTHR43939:SF13 TMhelix TRANSMEMBRANE mobidb-lite	9
LotjaGi5g1v0066800.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Nucleoporin; TAIR: AT4G31570.6 nucleoporin; Swiss-Prot: sp\|Q5B993\|ATG11_EMENI Autophagy-related protein 11; TrEMBL-Plants: tr\|G7I5R4\|G7I5R4_MEDTR Viral A-type inclusion protein, putative; Found in the gene: LotjaGi5g1v0066800	Domains CYTOPLASMIC_DOMAIN Coil NON_CYTOPLASMIC_DOMAIN PTHR43939 PTHR43939:SF13 TMhelix TRANSMEMBRANE mobidb-lite	9
LotjaGi5g1v0066800.4 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Nucleoporin; TAIR: AT4G31570.2 nucleoporin; Swiss-Prot: sp\|Q5B993\|ATG11_EMENI Autophagy-related protein 11; TrEMBL-Plants: tr\|G7I5R4\|G7I5R4_MEDTR Viral A-type inclusion protein, putative; Found in the gene: LotjaGi5g1v0066800	Domains CYTOPLASMIC_DOMAIN Coil NON_CYTOPLASMIC_DOMAIN PTHR43939 PTHR43939:SF13 TMhelix TRANSMEMBRANE mobidb-lite	9
LotjaGi6g1v0098200.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	TGN-related, localized SYP41-interacting protein, putative; TAIR: AT1G24460.1 TGN-related, localized SYP41 interacting protein; Swiss-Prot: sp\|F1PT61\|MYH16_CANLF Myosin-16; TrEMBL-Plants: tr\|A0A0B2SJF6\|A0A0B2SJF6_GLYSO Uncharacterized protein; Found in the gene: LotjaGi6g1v0098200	Domains CYTOPLASMIC_DOMAIN Coil NON_CYTOPLASMIC_DOMAIN PTHR43939 PTHR43939:SF19 TMhelix TRANSMEMBRANE mobidb-lite	9
LotjaGi6g1v0098200.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	TGN-related, localized SYP41-interacting protein, putative; TAIR: AT1G24460.1 TGN-related, localized SYP41 interacting protein; Swiss-Prot: sp\|Q07970\|KN14C_ARATH Kinesin-like protein KIN-14C; TrEMBL-Plants: tr\|A0A0B2SJF6\|A0A0B2SJF6_GLYSO Uncharacterized protein; Found in the gene: LotjaGi6g1v0098200	Domains CYTOPLASMIC_DOMAIN Coil NON_CYTOPLASMIC_DOMAIN PTHR43939 PTHR43939:SF19 TMhelix TRANSMEMBRANE mobidb-lite	9
LotjaGi6g1v0098200.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	TGN-related, localized SYP41-interacting protein, putative; TAIR: AT1G24460.1 TGN-related, localized SYP41 interacting protein; Swiss-Prot: sp\|F1PT61\|MYH16_CANLF Myosin-16; TrEMBL-Plants: tr\|A0A0B2SJF6\|A0A0B2SJF6_GLYSO Uncharacterized protein; Found in the gene: LotjaGi6g1v0098200	Domains CYTOPLASMIC_DOMAIN Coil NON_CYTOPLASMIC_DOMAIN PTHR43939 PTHR43939:SF19 TMhelix TRANSMEMBRANE mobidb-lite	9
LotjaGi6g1v0098200.4 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	TGN-related, localized SYP41-interacting protein, putative; TAIR: AT1G24460.1 TGN-related, localized SYP41 interacting protein; Swiss-Prot: sp\|Q9UPS8\|ANR26_HUMAN Ankyrin repeat domain-containing protein 26; TrEMBL-Plants: tr\|V7D204\|V7D204_PHAVU Uncharacterized protein; Found in the gene: LotjaGi6g1v0098200	Domains CYTOPLASMIC_DOMAIN Coil NON_CYTOPLASMIC_DOMAIN PTHR43939 PTHR43939:SF19 TMhelix TRANSMEMBRANE mobidb-lite	9

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
mobidb-lite	MobiDBLite	1	5.56