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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0480200 |
| Transcript ID | LotjaGi3g1v0480200.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase; TAIR: AT5G22620.1 phosphoglycerate/bisphosphoglycerate mutase family protein; Swiss-Prot: sp|Q9FNJ9|CA1P_ARATH Probable 2-carboxy-D-arabinitol-1-phosphatase; TrEMBL-Plants: tr|G7JKZ0|G7JKZ0_MEDTR 2-carboxy-D-arabinitol 1-phosphate (CA1P) phosphatase; Found in the gene: LotjaGi3g1v0480200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:89771786..89777123) extracted from Lotus japonicus Gifu genome v1.2.
TCTCCCTCCAACTTAAGTACAATCAGAGAGATATGGAAGCAGAGGCAACCAACCAACCATATAACACTAACAAAAAAAAA ACAGCAAGTCATAAACAGTGACAGCATGGTTCTGGTCTTACAACCTTGTTCTTCTTCCGTCAGCGTCCTCCACCATGATC ACCACCACCACCACCACCACCACCACCCCACCCGCAACGCCGTCGTTCGATGCAGCCTGCAGGAGATAACAGAGGAGCTA AGTAGCTCGAACCTCATCCATTTCCCTCCACTGAAAACGGCGAAGAGGGTGGTGCTGGTGAGGCACGGCCAGAGCACGTG GAATGCCGAGGGGAGGATACAAGGAAGTTCCGATTTCTCCGTTCTCACCAAGAAAGGAGAGTCTCAGGCTGAAACTTCAC GCCAAATGCTCTTCGATGATAACTTCGATGTCTGCTTCTCCAGGTTAGTTCTATCTTCTCTGAAACCTTGAATCATCTTC CTTTGCTTTTTCTACTTTCTGTGACGATTGGGATTTTCTGCTGTTTTTTTGTTCATTTCCTGCACAAAAGTCCTCTGGCA CGGTCTAAGAGAACAGCTGAAATCATATGGGGACCTCGCCCTGTACCAATCATCCCCGAATTCGAGTTGCGGGAAATCGA TTTGTACTCCTTTCAGGTAATGCTTTTATTGCTTTAGCTTTGTGAATTTGGTTACTCTCTTATAACACTCATTTGTGATC AAATACACTAGGATTGAGCTCATGTGAATATAATGTGTAAGAAAATTAATTGCTTAGATTTTAACTTTAGAAGTTTCTGT TCCTGTTGAAGCTGTTTTATATTACAGATTCAATAATTGATTTTTCAACAAATGGTTATTCTTGCAATTTATCCTCTAAA TTAGGCTTTCCCATTAGCTGGGTTTGGCTATATGAATACAATGATGAGCACACATATATACCATTTATCTTTTTAGTATT TTTCTGTAACTCTCTATCCCTAGCTCAGAGTTTCAAGTTGCGGACAAATGTGGCCGCAATTGCAGTCACAATGCCGATGA GGGGGCCTAAGATGCTCTGCGTTGTGGCTGCAATTGCAATTGCGAGCTGCAATTTAAAACCCTGCCCTGGTTATTGTGCT ATCTTCTTTCGGATTAACTCTCATTAGCAGCTATTGGTCTATACTATATAATAAATTACCAAGTTATTAGTAAAATGTAT TCTCTTGATCTTTTAATTAGCATTATAACTTTATTAATTACATGTTGAGAACTTGAATCTGATTGATTAAATTAATCCTT GAGGAGCTAAATTGATTATATTATCTTAATATCTTGTTTATGGATTATTTGTGCTTTGGTGTGACAGAACTTGTTGTTCT TGTTGCTGGATTTTAGGGTCTACTGAAGCATGAGGGACAAGAGAGATATGGTCCTGCTTTTCGTCAATGGCAGGTGGATG CCTCAAATTTCATCATTGATGGTCATTATCCAGTGAGAGAGTTGTGGGAGCGTGCTCGAAGCTCCTGGACTAAAATCCTA GCTCATGATAGCAGGTCTGTTCTTGTGGTTGCTCACAATGCTGTTAATCAGGCTCTTGTTGCCACAGCAATTGGTACCGG TTTCTCTCTCTAAGGAAATTTAGATGATGAAAAAGGCTGAAATTTTGTGAATTTGAATAATGTGCTCATATTTTCTTCCA TTGAAAATGATCAGGTTTGGGATCAGAGTATTTCAGAGTTTTACTTCAGAGCAATTGTGGTGTAAGTGTGCTGGATTTCA ACCCAAGACCCGAGGGTGGACCTCCACATATTTGCCTTAACCGCTTAAATCAGGTATATAGTACCTTAACTTGGTGCAAC GCAACAAAGCTGACTATCTGAATCTGGATGTCGGAGGCTTTGTTATTCCTGTGACAAAGCTTCAGATTATAAGCTGATGT GACATTCCGCACTTTTATATTGTGTTATTCCCTCTTTGTAAAACATATTATTTAACATTTTTCACAACGAGCAATGTGCT CAACAGTTCAGGCTGTCCTTTACATAAAATTGAACTATTATTGCAGACACCTGGTTCACCTGTTGCTGGTGGAAAATCTG GAGGTAGAGAGTCAAGTAAGCGGATCGTACTGGTTTGTAATGGATCTACACAAGGAAATACAGAGGTATGGAGCAATAAT TAGAATGTAATTGAACAGATATAACTGGTCGAAGGATCATCAGCAAACATTATAATACCTGAGTTTATTGTCTATTGCAT TTCTGCAGCTTATATGCAAAAGGATACTATGTCTCTCGTAAGCCATTTCTGTAGAAAATTCTAGTCTGAGTAATGAACTC TTGCATTCGTGCTAGTATAAGATAATAGACCCATATACTCCCTACCTTAAAGTTTTGTATCAAGATGTTAAGTTTCTTAT TGCAGTCTCATTATTTTTCTTTTGGTCAAAATTGCTGTGTTATTTGTAGATCAGTAATATAGATCTTCCTACTTTTCGGA CCTTAGACCCCGACAAATGGTATCAAAGCTGATGATTTGGCTGTCAAATAAATGGAAACATATATTAGTGTAGTTTTCAC CTTCAACCGATGTTGTAAAAACATTAGACAACACTTGGGCCTGTCTCTTGATTGATAACCTTGTTTTCTTATAGAGGTTT CCCTAGCCTTGTGAGAAATCAAGTCACACATTGATTTGGAAGGAATGATGGCCCAGTAATTAGATCTTCCTGGTTCGGTG ATCTCCTAAACCCCCAGTGATTTCTTTCCTAATACTAGTATCAGAATACGTTCCTAGAGACCTCAAGCAATAGTAGTTTT CTAATAACTCTTTCTAACATCCATTGCAAAGCGTAAAATGCATTTTTTATTACAATGGGAAGTATGTTTGAAAGTGATCA GAGAAATAGAACTGTAAATTTATGGAAGTGACTGTCACTATGGAAGTATGGATTTTTACTAAAACATTGTTAATATGGCA GGGATTCTTAAGTTGTGTTTCCCTGTTTCTACTTTTTTCTTATTTTATCAAAATCATTAATGCTCTTAAATTTGCACTGG GATGGACTATTTTAGATATAAAACCATTCGTGTTCTTTCAATCTATAGTTTAAGCTTTTAAGATAGTTGATTTAAGATAT GGTATCAAAGCTGCTATGATCATGCAGTTCCATGTTAACCCCACTCTTCTGAGTATATTTAAATTTCAACATAAGGTAGG GTGGCCCTATGCATTATCTTGTGTGAGGGGGCATGTTAGATATAAAACCACTCATATGCTTTAACCCAACAAATTAAGCT TTTTGGATAGTTGGTTTATGACAAAAGGCTCCTTTAAGTTCTATTCCAAATTCATTTCTTTTTGTCAGGTTTCTAAACAA ACTACCTTCTGTTGACAGAATGGTTTTCCTTTTGCTGCTGATCAACCGATGAACATGCTTGGTGTTATACAGGTAGTTCA TCCAGTTATCACAAATAGTGAGGCAAAGTTATTTCATCTGACCTTTTGCATGTGTAACAGTCCCAGAAATCTGCAGAGCT ACTTCTTGACTTGAATGTGAATTCCATAATCAGTAGTCCTAACAAAGCTTCTGTTGAGACAGCCACGGCCATCTCCAAGG TAAGCTCACTTTTGGTACTTGTTAGTTCCATCATGCTAAACACTTAGTTCTATAATGCAAATTCCTATATCCAATCTATT AACACCAAGTCTTTGCATCTACTTACCAATAGGTTCTGCTTTTGATACACATGTTGAGGTGCATTCCTTTCTATTTCTGT TCATTGTTGTTCTACTCTAATGAAACCTTAGACATGATTTTAGGTACAAGAAGCTGCTGATTGCTTAGGTGCTGACTGTG TGCCACGCTATGTTGAGACAAAGCAGATGGAGAACCTTGATGTTGAAACGATCTTTAAACAATCCAAATCGGCAAGTAAC TTATACAGTAGATGTGCTTGTATGTGAAAGCATGACCGGTCATTGATAGACTATTTGATTTTAGGAATGAGTACTTCTAG TTGATGGTATATTTCACACACTGGGATGATCTTGACAGAGCAATGACCATAAGAATTTATCAAATACCTATTGAAGATAT AGATAAAAAGCTTAAGCAGTATTGGAATGTGGAAAATAATTGTGACCATCTCAATGTACTAAGAAGTATGTAAACTAGGA AAAGGTTTTAGTAAGTGTTTGTCACCAAACACTACTTTTGGTCCTTATAGTTGTCTCTAGCTTTGATCTCTGTCTTTCTA GTATTCCTAAACAAAAGATTTGATTGACGATTTATGTGTGAATATCAGTGTGTTCTGTCTAATTTTTTCTGTATTTATTG CAGGTTGTATCCAATTTTCCACCATTTCAGCCTGGGTGGTTAAATAGAGTTGAGGATGGATTTAGAACAGCATTATGGGA CCAATCTGGAAAAGCCTGGGAATCCCTGTTGGGTGAAATACGTGATGAGTCTATGTCAGGAGATGTTGTAGTTGCAGTTG GTCATCCTATGATCCACATAGCAGTAATGACACACTGTCTTAATTTGACCAAAGACTGGTTGGGATCGTTCCATCTTGAT GCTGGGAGCGTGAGTGTCATTGACTTCCCTGATGGACCTAAGGGAAGAGGTGTCATCAGGTGCATAAATTATACTGCACA CTTGGGGAGATGGTCCATCCCTATTACAAGACCAACAGAGGATGTTGAAGAATTCTAACTGTAAATTTATTATTTTAAAA GTAACTTAAAATGACACCCAGCACCAAATTTATAGAGCTACAGAGGTTCAACATGATCATGGCTGTTAAAATTTTAGGGC ATGAAAGTAGAAATGAAATCTTAGTCAGGGGATATGATGTGACCTTAGGGTGATGGGAATGAGTCAGATTAATTCGTGCA TAAACTGGTTATTCTACCCATTTGAAAGGTGTACACCACGAGGCATTGGAAACAACTAGAGTAACTTCTGGATAGCAGTT CTTTGTAGAAGCTACTCTTGCTATTTCCTTTGCCTCCTGGTGTAAAATCCTTATGTTCCTTCACCCTTGGTCTTCCTTTC AACTGAATTATTTTCTCATAACAAACGAGGCATAAGTTTCTATTAATAAGAAATGGATCTTCACCAAGCTTGCAATAGGC AGTACAAAGTCCCATCTAAAGATGATGTTTCTTAATTGTCTTTCAAACAAAGATTCATCAGTTATTCAGATTTAGTAGCC CATTGCAGTTCTTCACTCATTTTTTCTTTTAGGAAAGTGACTTGTAAGACTAATCAAGAAGCTATGGCAGTGTTTTCCAT CAAATGATTTCTCAAGGTTCGAATTTGTATTCTCATCCTTAGCTTACTTACTATGGAC
CDS sequence (LotjaGi3g1v0480200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTTCTGGTCTTACAACCTTGTTCTTCTTCCGTCAGCGTCCTCCACCATGATCACCACCACCACCACCACCACCACCA CCCCACCCGCAACGCCGTCGTTCGATGCAGCCTGCAGGAGATAACAGAGGAGCTAAGTAGCTCGAACCTCATCCATTTCC CTCCACTGAAAACGGCGAAGAGGGTGGTGCTGGTGAGGCACGGCCAGAGCACGTGGAATGCCGAGGGGAGGATACAAGGA AGTTCCGATTTCTCCGTTCTCACCAAGAAAGGAGAGTCTCAGGCTGAAACTTCACGCCAAATGCTCTTCGATGATAACTT CGATGTCTGCTTCTCCAGTCCTCTGGCACGGTCTAAGAGAACAGCTGAAATCATATGGGGACCTCGCCCTGTACCAATCA TCCCCGAATTCGAGTTGCGGGAAATCGATTTGTACTCCTTTCAGGGTCTACTGAAGCATGAGGGACAAGAGAGATATGGT CCTGCTTTTCGTCAATGGCAGGTGGATGCCTCAAATTTCATCATTGATGGTCATTATCCAGTGAGAGAGTTGTGGGAGCG TGCTCGAAGCTCCTGGACTAAAATCCTAGCTCATGATAGCAGGTCTGTTCTTGTGGTTGCTCACAATGCTGTTAATCAGG CTCTTGTTGCCACAGCAATTGGTTTGGGATCAGAGTATTTCAGAGTTTTACTTCAGAGCAATTGTGGTGTAAGTGTGCTG GATTTCAACCCAAGACCCGAGGGTGGACCTCCACATATTTGCCTTAACCGCTTAAATCAGACACCTGGTTCACCTGTTGC TGGTGGAAAATCTGGAGGTAGAGAGTCAAGTAAGCGGATCGTACTGGTTTGTAATGGATCTACACAAGGAAATACAGAGA ATGGTTTTCCTTTTGCTGCTGATCAACCGATGAACATGCTTGGTGTTATACAGTCCCAGAAATCTGCAGAGCTACTTCTT GACTTGAATGTGAATTCCATAATCAGTAGTCCTAACAAAGCTTCTGTTGAGACAGCCACGGCCATCTCCAAGGTACAAGA AGCTGCTGATTGCTTAGGTGCTGACTGTGTGCCACGCTATGTTGAGACAAAGCAGATGGAGAACCTTGATGTTGAAACGA TCTTTAAACAATCCAAATCGGTTGTATCCAATTTTCCACCATTTCAGCCTGGGTGGTTAAATAGAGTTGAGGATGGATTT AGAACAGCATTATGGGACCAATCTGGAAAAGCCTGGGAATCCCTGTTGGGTGAAATACGTGATGAGTCTATGTCAGGAGA TGTTGTAGTTGCAGTTGGTCATCCTATGATCCACATAGCAGTAATGACACACTGTCTTAATTTGACCAAAGACTGGTTGG GATCGTTCCATCTTGATGCTGGGAGCGTGAGTGTCATTGACTTCCCTGATGGACCTAAGGGAAGAGGTGTCATCAGGTGC ATAAATTATACTGCACACTTGGGGAGATGGTCCATCCCTATTACAAGACCAACAGAGGATGTTGAAGAATTCTAA
Protein sequence (LotjaGi3g1v0480200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVLVLQPCSSSVSVLHHDHHHHHHHHHPTRNAVVRCSLQEITEELSSSNLIHFPPLKTAKRVVLVRHGQSTWNAEGRIQG SSDFSVLTKKGESQAETSRQMLFDDNFDVCFSSPLARSKRTAEIIWGPRPVPIIPEFELREIDLYSFQGLLKHEGQERYG PAFRQWQVDASNFIIDGHYPVRELWERARSSWTKILAHDSRSVLVVAHNAVNQALVATAIGLGSEYFRVLLQSNCGVSVL DFNPRPEGGPPHICLNRLNQTPGSPVAGGKSGGRESSKRIVLVCNGSTQGNTENGFPFAADQPMNMLGVIQSQKSAELLL DLNVNSIISSPNKASVETATAISKVQEAADCLGADCVPRYVETKQMENLDVETIFKQSKSVVSNFPPFQPGWLNRVEDGF RTALWDQSGKAWESLLGEIRDESMSGDVVVAVGHPMIHIAVMTHCLNLTKDWLGSFHLDAGSVSVIDFPDGPKGRGVIRC INYTAHLGRWSIPITRPTEDVEEF
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 44 | 255 | 212 | 5.4E-110 | – | |
| PANTHER | 44 | 255 | 212 | 5.4E-110 | – | |
| Gene3D | 60 | 261 | 202 | 7.4E-50 | ||
| SUPERFAMILY | 60 | 257 | 198 | 1.77E-49 | ||
| CDD | 61 | 248 | 188 | 2.01362E-33 | ||
| SMART | 61 | 215 | 155 | 3.3E-19 | ||
| Pfam | 62 | 244 | 183 | 3.8E-40 | ||
| ProSitePatterns | 64 | 73 | 10 | - | ||
| Gene3D | 272 | 491 | 220 | 1.1E-16 | ||
| PANTHER | 275 | 493 | 219 | 5.4E-110 | – | |
| PANTHER | 275 | 493 | 219 | 5.4E-110 | – | |
| SUPERFAMILY | 277 | 492 | 216 | 4.28E-20 | ||
| CDD | 279 | 479 | 201 | 1.48502E-8 | ||
| SMART | 279 | 441 | 163 | 3.8 | ||
| Pfam | 280 | 471 | 192 | 1.3E-9 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. |
Expression pattern of LotjaGi3g1v0480200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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