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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0486000 |
| Transcript ID | LotjaGi3g1v0486000.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Carboxypeptidase; TAIR: AT3G45010.1 serine carboxypeptidase-like 48; Swiss-Prot: sp|Q56WF8|SCP48_ARATH Serine carboxypeptidase-like 48; TrEMBL-Plants: tr|I3T377|I3T377_LOTJA Carboxypeptidase; Found in the gene: LotjaGi3g1v0486000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:90346413..90350870) extracted from Lotus japonicus Gifu genome v1.2.
CAAAATACAAAACTTTAAACCATTTCACACTCCAAAGCACTTTTTTGTTAGGGACACTCCAAAGCACTTAGCGAGTTAGC GCCATAGACACCGATCGAGTCCTATAAATTCGTATCAAATTCCACACATTTTCCACCTACACAACCAACATGACATCATC ACAATCACAATCCTTCTGTAAATTCTCTCTGACACTTTTGCTGTTCGTTTTCATTTCATCACTTTTTTCTTCTTCCTATG CAACTTCTCGCTTGGCCACAACAAAAAGAACACACTATTCACCAAAACTACAAGCAGAAAGGCTCATAAGAAGCTTTAAC TTGTTCCCTAGGGACACAGTTAACATCAGACTAGATGACGAAAATGATGAATTTATCCCTGGGAAGATTGTGGAGAAGAA ATTTTCTTTTCTTGGTGATTCTGGTCCTTCAGTTGAAGAACTTGGTCACCATGCTGGGTACTATTCACTTCCTCACTCCA AAGCTGCAAGGTTAGAAATATCTTATGTAAACTCTGATAAATGTTTCCTTTTGAGGTTTGATTTGCTATTGAGTATTTCA AATAGATCACTAATCTATTTTGGCTATTATTATTGAATCTATGAGTTAAATTAAAGTACTTTGCAACAAAAAGAATTAGT TTTCTTCATGGGATGTTTAATTAGATTAAGTTAGACTAACTTAAACACTCATCATAAATCAAACATTCCGCAATCTTGTG CAGTATGTTTAATTTAGGTACAAAACTAACATACCACATTCTAGTTTGCATAATGTAGAATTGTATATGTTCCTACCAAA AACTAGTGATGGTGAGAGAGATTAAAAGTTAGAGTTATTTTAGTTTTTTTTTTTTTTCTTTTCAAAAGTGGGGGTGGGGT ATGTAGTATCTCTCAACCACAAATTGTCCAACAAGTGATGCTTTTTTGTCAAGTCATTCACACCATCACATTCACAGGTA ATAGTCGTGCATGAATCTCAACCATTCTAAATTTTGGTATTTAGTGTCAGGTTGTTTCCCAATTAATAAATTTATAATTT TTCATTTCTAATTAATTACTCCATAATATGTGAACCTGAATTGGAATGTCATCTTTGTTGTATTTGCAGGATGTTCTACT TATTCTTTGAATCACGGAACAGCAAAGATGACCCTGTTGTGATATGGTTGACTGGAGGACCAGGGTGTGGCAGTGAACTA GCTTTGTTCTATGAGAATGGCCCTTTTCATATTACCAGTAACTTGTCTCTCGTGTGGAATGACTATGGCTGGGACAAGGT AACACTTAAATCCAAAGACTTTGTTTAACAAACATATCTACTATCAAGTTGTTGCACCAAAATTGTTTGTTTTTGTCAAC ATGAGTTATTTTTCTTTTCCTGTTTTGCAGGCATCAAATATTTTATTTGTTGACCAACCCACCGGGACTGGTTTCAGCTA CACTTCTGATGATGCTGATATTCGCCATGACGAAATCGGTGTCAGCAATGATTTGTATGACTTCTTGCAGGTACCCTACA ATCCCTTCTTAATTTACCTGAATAGAAACTAAAGCTTGTTAAACTCTGGAAATGTTAGCTATGTTAATTCATGTGTCTAC ACTCAACAGCTTAATTAGTACGTGTTTGGATCAGCTTTGTCTAAAGTTGATTTTGATAGAATTGATTTTGGTAAAATTGA ATATGATAAACTGTGTTCTTTGGAAAAGTGGATTTTGTTGGCTTGGGTAAGCTACTACTATCTCTAGCTTCCAGCATTTT TAATTTGAGGCTGAAATCAAATTTTCAAAATGACACCCAATGTTGACATCCAAAATTGATTTTACTTTCTTAGAATTGAT TTTGAAGATCCTCAACGGGAACCAAACACACACTTAGTATATGTTTGAAAAAAAGTAGAAATCAACTTAAAATGACTGTT AGGCTAACCACCAATGAAATATTTTTCTTCCTTCTGCTTTTCCTGCATTGGAAGTCATAACTGATATCCAAACACACTCA ACCTTTTCAGATGTTTGGTTCATGATATGTTATCAAAGTCTCCATAACTATGTGATAAGCTTTTAGGACAGTGTATAGAT AAAATCCACTAAAAATCTTCTTGCTACATTGACAGGAGTTTTTCAAGGCACATCCTCAGTTTGTTAAGAATGACTTTTAT ATTACTGGAGAATCATACGCTGGACACTACATTCCAGCTCTTGCATCCAGGGTTCACCAAGGAAACAAAGAAAAACAAGG AATTTACATAAACCTCAAGGTCACATAATTTATACTATGGATATGAAAGGATAATCATCAATTCTTTTGTCAGGGTTCTG ATATTGATTCTTGATCCTGTTCAATAACAGGGTTTTGCTATTGGTAATGGGTTAACCAACCTTGAAATTCAGTACCCAGC TTACACAGATTTTGCATTAGACAACGGATTAATTACAAAGGCTGAGCAGGAAGAAATCAACAAGATTGTTCCAAATTGTG TGCAAGCTGCGAAAACTTGCAGTACACAACTAACTCCGTTCTTTGCATGTTTTCATTTTCACTTCTCCCCTTTGTGCTAG TTACAAATTCATGTCATTTCTCTTTGTGTTGTTTGTTGATTTGTGCTTGATTTGTTAGACACTGAAGGTGGGGAAAGTTG CGATTCTGCGTTTGGTGTTTGTCAAGAAATATTCGATGATATCCTATCCATTACTGGAGACATCAACGTAAATAATCATG AAAGAACAATACCTTTTTTTCTTTTTGCATGTTCTGTTTGAGAAAATAGTTAAATTTGTGATCATTTTGCTGTTTGCATT GTTTTGATGTGAATTTTGCAGTACTATGACATCAGAAAGAAATGTGAAGGACCTTTGTGCTATGACTTCTCAAACTTGGA GACACTTATGAATGAGAAGACAGTGAGGGATGCTTTAGGTGTAGGAAACTTGGAGTTTGTTTCATGCAGTAGGAGAGTGC ATGCTGCTATGTCGCAGGACTGGGTGAAGAACTTGGAAGTTGGTATTCCTTCTCTTCTTGAGGATGGAATCAAGGCTCTT GTGTACGCTGGTGAATATGATCTCATATGCAATTGGCTTGGTGAGCTTAAATAAGACTCTATTCATTTAAAACCAATTTG CTTTTGGATTGAGTAAGCTGTTTTGAGATAGCATGTTTGGTTGAACGGTTAAAAACTCTATGATCACTTCGTGCTACAAA CTGGAAGTCCTAATAGTATGTTTGGATCGGTTTCAATTTTCAAAGAATCAGTTATGAAGTCCAAAAGCTAAGAAGCTTCT CTTAAGAATCGATTCCAGCTTCAGAATCAATTGTAAAGTGATTCCCTAACATGCACTTAGCTTCTGAATAAATGTGTCTA AAATTAGTGAAACTCTACCATTGATTCTAAAGATGGAATCAATACTGAGGAGAAGTTTTTGTTAGTAGCTTCCAAGTTTC AGAATTGATTCTAAGTAAAGAGAAATTAATCCAAACATGCTACGAAGATGTTAAGAATGTATTGTTGATGTAGCTCTACT CTACTCATTTGGCAGGGAATTCAAGATGGGTTCATGCCATGGAGTGGTCAGGCCAAAAGGAGTTTGGGGAATCCCCTACA GTGAAATTTTTTGTTGATGGTGCTGAAGCAGGGTCTTTAAATAGTTATGGACCACTCTCTTTTCTCAAGGTTTGTGTTTA TAGTTGGGATGCATGACATTGTTAATTCTACTTTTGGTAACTTTATAGTTGGGACTTGTGATGTAACAGGTGAATGGGGC TGGACACATGGTCCCTATGGATCAACCAAAAGCTGCACTTCAGATGCTGACAAGCTGGATGGAAGGGAAATTGAACTAGT GAACTTTAATCTCTAGAAGATTGGGTTATGTAAACAGTAGAAAAGACTGTAAAATTTAATTCAAAATGAAAATGCATAGA AGTTTGGACTTCAAGACCTTATAGTCAATTCAAGATCAAAGCATTCAAGACCCAGTTGAAGAAGCCTACAGTTTCCATGT CCAATTCAAATACAAGTTCAAGTGACCAGTTAGAATTGCTTTCCTACAAGGCCAGTGTTCTGTTTGACTCTTGATGTGTC AAGTTATTAAGAGAAACAAGTTGTTGGCTTTAAACAAAAATGACTTGAGTACAAAGATGTTGTAGTCTAATGGAACCTTG AAGAGGATTTCCACCAACTTGTAAGTCAAAGCAAGCATAAGCATGAAGTAGAAGAGTTAAGTTATCAAACATAAGCAAAT TCATGAAATACACAAAAGGCAAAAAAACCAGTAATCTCATGAAGTAATTAAGGAAGAGCACTATAACAGTAGAGCTTAAT ACTAATAGAGTATATGGCACATTCTGACAAAGCTGTAAGATTAAATAATAAGAGAAACCGGATTTAAAAGTAATTTAAAA CTCACCAGTGTCTCCTTGAAGGGATTACAGTAGCCACTGGAAGCTTCACTGTTACGAC
CDS sequence (LotjaGi3g1v0486000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGACATCATCACAATCACAATCCTTCTGTAAATTCTCTCTGACACTTTTGCTGTTCGTTTTCATTTCATCACTTTTTTC TTCTTCCTATGCAACTTCTCGCTTGGCCACAACAAAAAGAACACACTATTCACCAAAACTACAAGCAGAAAGGCTCATAA GAAGCTTTAACTTGTTCCCTAGGGACACAGTTAACATCAGACTAGATGACGAAAATGATGAATTTATCCCTGGGAAGATT GTGGAGAAGAAATTTTCTTTTCTTGGTGATTCTGGTCCTTCAGTTGAAGAACTTGGTCACCATGCTGGGTACTATTCACT TCCTCACTCCAAAGCTGCAAGGATGTTCTACTTATTCTTTGAATCACGGAACAGCAAAGATGACCCTGTTGTGATATGGT TGACTGGAGGACCAGGGTGTGGCAGTGAACTAGCTTTGTTCTATGAGAATGGCCCTTTTCATATTACCAGTAACTTGTCT CTCGTGTGGAATGACTATGGCTGGGACAAGGCATCAAATATTTTATTTGTTGACCAACCCACCGGGACTGGTTTCAGCTA CACTTCTGATGATGCTGATATTCGCCATGACGAAATCGGTGTCAGCAATGATTTGTATGACTTCTTGCAGGAGTTTTTCA AGGCACATCCTCAGTTTGTTAAGAATGACTTTTATATTACTGGAGAATCATACGCTGGACACTACATTCCAGCTCTTGCA TCCAGGGTTCACCAAGGAAACAAAGAAAAACAAGGAATTTACATAAACCTCAAGGGTTTTGCTATTGGTAATGGGTTAAC CAACCTTGAAATTCAGTACCCAGCTTACACAGATTTTGCATTAGACAACGGATTAATTACAAAGGCTGAGCAGGAAGAAA TCAACAAGATTGTTCCAAATTGTGTGCAAGCTGCGAAAACTTGCAACACTGAAGGTGGGGAAAGTTGCGATTCTGCGTTT GGTGTTTGTCAAGAAATATTCGATGATATCCTATCCATTACTGGAGACATCAACTACTATGACATCAGAAAGAAATGTGA AGGACCTTTGTGCTATGACTTCTCAAACTTGGAGACACTTATGAATGAGAAGACAGTGAGGGATGCTTTAGGTGTAGGAA ACTTGGAGTTTGTTTCATGCAGTAGGAGAGTGCATGCTGCTATGTCGCAGGACTGGGTGAAGAACTTGGAAGTTGGTATT CCTTCTCTTCTTGAGGATGGAATCAAGGCTCTTGTGTACGCTGGTGAATATGATCTCATATGCAATTGGCTTGGGAATTC AAGATGGGTTCATGCCATGGAGTGGTCAGGCCAAAAGGAGTTTGGGGAATCCCCTACAGTGAAATTTTTTGTTGATGGTG CTGAAGCAGGGTCTTTAAATAGTTATGGACCACTCTCTTTTCTCAAGGTGAATGGGGCTGGACACATGGTCCCTATGGAT CAACCAAAAGCTGCACTTCAGATGCTGACAAGCTGGATGGAAGGGAAATTGAACTAG
Protein sequence (LotjaGi3g1v0486000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MTSSQSQSFCKFSLTLLLFVFISSLFSSSYATSRLATTKRTHYSPKLQAERLIRSFNLFPRDTVNIRLDDENDEFIPGKI VEKKFSFLGDSGPSVEELGHHAGYYSLPHSKAARMFYLFFESRNSKDDPVVIWLTGGPGCGSELALFYENGPFHITSNLS LVWNDYGWDKASNILFVDQPTGTGFSYTSDDADIRHDEIGVSNDLYDFLQEFFKAHPQFVKNDFYITGESYAGHYIPALA SRVHQGNKEKQGIYINLKGFAIGNGLTNLEIQYPAYTDFALDNGLITKAEQEEINKIVPNCVQAAKTCNTEGGESCDSAF GVCQEIFDDILSITGDINYYDIRKKCEGPLCYDFSNLETLMNEKTVRDALGVGNLEFVSCSRRVHAAMSQDWVKNLEVGI PSLLEDGIKALVYAGEYDLICNWLGNSRWVHAMEWSGQKEFGESPTVKFFVDGAEAGSLNSYGPLSFLKVNGAGHMVPMD QPKAALQMLTSWMEGKLN
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_EUK | 1 | 31 | 31 | - | – | |
| SignalP_GRAM_POSITIVE | 1 | 31 | 31 | - | – | |
| Phobius | 1 | 31 | 31 | - | – | |
| Phobius | 1 | 13 | 13 | - | – | |
| PANTHER | 12 | 495 | 484 | 6.7E-213 | ||
| TMHMM | 12 | 31 | 20 | - | – | |
| PANTHER | 12 | 495 | 484 | 6.7E-213 | – | |
| Phobius | 14 | 26 | 13 | - | – | |
| Phobius | 27 | 31 | 5 | - | – | |
| Phobius | 32 | 498 | 467 | - | – | |
| Gene3D | 81 | 498 | 418 | 3.1E-134 | ||
| Pfam | 98 | 494 | 397 | 2.2E-124 | ||
| SUPERFAMILY | 99 | 496 | 398 | 1.45E-126 | ||
| PRINTS | 164 | 176 | 13 | 1.2E-27 | ||
| PRINTS | 177 | 187 | 11 | 1.2E-27 | ||
| PRINTS | 212 | 237 | 26 | 1.2E-27 | ||
| ProSitePatterns | 226 | 233 | 8 | - | ||
| PRINTS | 465 | 478 | 14 | 1.2E-27 | ||
| ProSitePatterns | 465 | 482 | 18 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Serine-type carboxypeptidase activity | Catalysis of the hydrolysis of a peptide bond not more than three residues from the C-terminus of a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine). | ||
| Biological process | Proteolysis | The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds. |
Expression pattern of LotjaGi3g1v0486000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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