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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0514300 |
| Transcript ID | LotjaGi3g1v0514300.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Protein kinase; TAIR: AT4G33950.1 Protein kinase superfamily protein; Swiss-Prot: sp|Q6ZI44|SAPK6_ORYSJ Serine/threonine-protein kinase SAPK6; TrEMBL-Plants: tr|I1J9Q1|I1J9Q1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0514300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:93141391..93143077) extracted from Lotus japonicus Gifu genome v1.2.
GCCATATACAACAAGTTTAAAATGTCAGCATCTTTTTTACAGGTATTTCTGACCCCTACTCATTTAGCTATTGTCCTAGA GTATGCTGCTGGTGGTGAACTCTTCGACAGGATATGCACCGCTGGTCGGTTGAGTGAAGATGAGGTTGTGAAGTTTATAT ATGTCAAGATAGATAGATAGTTCCTCTATATGCATAAATTACCTTGTAGTTGTTCTGATGAATTCCTGATATTACAGGCA AGATATTTCTTCCAGCAACTACTATCTGGAGTTAGCTACTGTCATTCCATGGTATTGTATTTGTATATAATATGCACTCA GAATTACTCTTTTTTTATTCTTTGAAAATTGTCTTATATCATCTCATTCATCTCACTGCAGCAAATTTGCCATAGAGATT TGAAATTGGAAAACACTCTATTGGATGGGAGTCCAGCTCCTAGAGTTAAAATTTGTGACTTTGGTTTCTCCAAGGTTGAT ATTAACATCACAGCTAAATCAACCTTTCGGGTAGTAGTGCTTTCATATATTTGTTTGTTAACTTTCACATTTAATTTTAT ATTTTGCAGTCTGCTTTATTGCACTCTCAACCTAAATCAGCAGTAGGAACTCCAGCATACGTTGCTCCAGAGGTTTTGTC ACGAAAGGAGTATGATGGAAAGGTATTGTTATTTGTGCCTATTATCTGATTATTTCACTTTTCATCACACAATCCACAAA TGCTCGATTTCGTTCACAAATTGGCAATTATGTAGATTGCAGATGTTTGGTCATGTGGTGTGACTCTTTATGTCATGTTA GTTGGATCATACCCATTTGATGATCCAGAAGATCCTACAGATTTCAGCAAGAGTATTGCGGTGAGCTCTTACTTGAATTT AAACTTCTATTATGATTAATACATTTGATCTATAGCAGGAAGTTTAAACTCTGGTTACTTGTTTGCAGAGAATAAAGAGT GTTCAGTACTCCATACCTGACCATATACACATTTCTACAGAGTGTAGGAATCTAATCTCTCGTATTTTTGTTGCAAATCC TGCCAATGTAAGAATTACTAATTCTCTCAAACCATAGGACTGATATGAGTAATCTAGTTAAACAAGCTATATGAAACTAC AATTGTTCATGTTAATACTACAATTGATATGATACCTTAATATTTAAGACTACCTAATAAGTGGTTTGGTTTTTGTAACT ATTTAAGTGGAAGTAGTTCTTGTATAGTGAGAATCTCCTTATATTTTTTCAAACTAATTACTTATCATTCTTGCCATCAA AGCGAATCAGCATCTCAGAGATAAAACAGCTCCCATGGTTTCGGAAGAAATTGCCTAGAGAGATAATTGAGGCTGATAGA AAAAGTGGTGAGAAAGCAGAAAAGGAGCAACCAAGCCAATATGTGGAAGAAATCATGCGGATCGTACAAGAGGCAAGGAC ACCAGGACCTGGAAGCGAAGATAGTGAGGAGGAAGCTTGGACAGGCTCATCTGATGCTGTGGATGTTGATTTCTTCAGCA AGTTTGTATGATCCTAGGCTATAAATTATTTGTGGGTATTGATAACAAAAACCTTATGCATTCGTCACCTTTTGCACACT TGAAACAAATTAAGTTAAGCATAGTTTGAACAAGTTTTATTTAAGAGTCAAGTAAAGTTTGTGCTATTTATTAAAGTCAA ATTAAAG
CDS sequence (LotjaGi3g1v0514300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCAGCATCTTTTTTACAGGTATTTCTGACCCCTACTCATTTAGCTATTGTCCTAGAGTATGCTGCTGGTGGTGAACT CTTCGACAGGATATGCACCGCTGGTCGGTTGAGTGAAGATGAGGCAAGATATTTCTTCCAGCAACTACTATCTGGAGTTA GCTACTGTCATTCCATGCAAATTTGCCATAGAGATTTGAAATTGGAAAACACTCTATTGGATGGGAGTCCAGCTCCTAGA GTTAAAATTTGTGACTTTGGTTTCTCCAAGTCTGCTTTATTGCACTCTCAACCTAAATCAGCAGTAGGAACTCCAGCATA CGTTGCTCCAGAGGTTTTGTCACGAAAGGAGTATGATGGAAAGATTGCAGATGTTTGGTCATGTGGTGTGACTCTTTATG TCATGTTAGTTGGATCATACCCATTTGATGATCCAGAAGATCCTACAGATTTCAGCAAGAGTATTGCGAGAATAAAGAGT GTTCAGTACTCCATACCTGACCATATACACATTTCTACAGAGTGTAGGAATCTAATCTCTCGTATTTTTGTTGCAAATCC TGCCAATCGAATCAGCATCTCAGAGATAAAACAGCTCCCATGGTTTCGGAAGAAATTGCCTAGAGAGATAATTGAGGCTG ATAGAAAAAGTGGTGAGAAAGCAGAAAAGGAGCAACCAAGCCAATATGTGGAAGAAATCATGCGGATCGTACAAGAGGCA AGGACACCAGGACCTGGAAGCGAAGATAGTGAGGAGGAAGCTTGGACAGGCTCATCTGATGCTGTGGATGTTGATTTCTT CAGCAAGTTTGTATGA
Protein sequence (LotjaGi3g1v0514300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSASFLQVFLTPTHLAIVLEYAAGGELFDRICTAGRLSEDEARYFFQQLLSGVSYCHSMQICHRDLKLENTLLDGSPAPR VKICDFGFSKSALLHSQPKSAVGTPAYVAPEVLSRKEYDGKIADVWSCGVTLYVMLVGSYPFDDPEDPTDFSKSIARIKS VQYSIPDHIHISTECRNLISRIFVANPANRISISEIKQLPWFRKKLPREIIEADRKSGEKAEKEQPSQYVEEIMRIVQEA RTPGPGSEDSEEEAWTGSSDAVDVDFFSKFV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_EUK | 1 | 24 | 24 | - | – | |
| ProSiteProfiles | 1 | 202 | 202 | 37.135 | ||
| Phobius | 1 | 24 | 24 | - | – | |
| Phobius | 1 | 7 | 7 | - | – | |
| Gene3D | 3 | 252 | 250 | 3.4E-70 | – | |
| SUPERFAMILY | 4 | 211 | 208 | 1.03E-62 | ||
| SMART | 4 | 202 | 199 | 6.3E-51 | ||
| Pfam | 5 | 202 | 198 | 9.5E-54 | ||
| PANTHER | 5 | 264 | 260 | 3.6E-143 | – | |
| PANTHER | 5 | 264 | 260 | 3.6E-143 | – | |
| Phobius | 8 | 19 | 12 | - | – | |
| Phobius | 20 | 24 | 5 | - | – | |
| Phobius | 25 | 271 | 247 | - | – | |
| ProSitePatterns | 61 | 73 | 13 | - | ||
| MobiDBLite | 238 | 259 | 22 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi3g1v0514300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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