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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0522400 |
| Transcript ID | LotjaGi3g1v0522400.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Pathogenesis-related thaumatin family protein; TAIR: AT4G38670.1 Pathogenesis-related thaumatin superfamily protein; Swiss-Prot: sp|Q9FSG7|TP1A_MALDO Thaumatin-like protein 1a; TrEMBL-Plants: tr|K7LST4|K7LST4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0522400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:93938537..93946295) extracted from Lotus japonicus Gifu genome v1.2.
CAGTTAATGAACTCAGACCTTTTCAAGACAAATCAAATCATTGATCTAATGGCTAAATACTTCTAGTGTTTTCTAGCAAA TTCCTAAATTATTTATCAAGATACACTTTTGCCTAATCCAATGTAAAGGGTGTTGTTAGCTTCTAATCTAATCTTGTTTA GGTAGAAAATACAGTATCAACCCTACAAAGTGGGATCATGCTTCAAGTTCAACTAGGTTCTTTTCTCTAAGCAGTACATG ACTACATGTTATAAGCCAAAGGTCAGAAAATTAATATATATTAAAAAAAACTATATTTTGTGGAGGTAAGGGAAATTATT GGAGCAAGTAATTGAAACAGTGAACTGAGTGAAGAAATGAGTCAGCTGCCAAACACAGAAACTAACAAGCAAGCAAAAGA AAGCAAAAAAGAAGAACCAAACACCACTCACAAGAAAGTGAAGTGAATTGGAGTTTTCTGAATCAATCTTTCTTTCTTCA AAGTTTTTGTTCCTTCCTTAATCCACTCTTCCTCCTCCACATGGGTCGTCTTCTTCTCTTTCTCATTCTTCTCAGCCTCT TCACATTATCTTTCCTCTCAGGTAAGCTTCACAAACCACTCAAACTTCTCTGTCAAAACTTTCATGTGGGCTCTTTACAA ATTTGGTCCTTCAACTTGCAGAGGTACAATCAGCATCGTTCGAGATCGTCAACAAGTGCCGCCACACGATATGGCCGGGA CTACTCTCCGGCGCGAACTCGCCGCCGCTACCCACCACCGGTTTCGCCCTCGAGAGCGGCAAGTCGAGGACCCTTCACTT CCCGAAAGCTTGGTCGGGACGGATATGGGCGCGGACCCTCTGCGGCCACGACCGGGACGGGAAATTCTCCTGCGTCACCG CAGACTGCGGCTCCGACAAAGTGGAGTGCATCGGCGGGGCAAAACCTCCGGCGACTCTGGCGGAGTTCACCCTGAACGGC GCCGACGGGTTGGACTTCTACGACGTGAGCTTGGTGGACGGTTACAACCTCCCGATGCTGATCGTGGCGAGGCGAGGCAC CAGGGGTGGTTGCAGCCCCACCGGGTGTCTTGTGGACCTTAACGGTGGCTGCCCGAGGGATCTCAAGGTGGCGCGTGTGA ATGGGACTGGTGGCAGCGTCGCGTGTATGAGCGCGTGTGAGGCTTTTGGGGACCCGCGGTATTGCTGTAGTGAGGCGTAC TCTACGCCTGACACGTGTGCTCCTTCGGTTTACTCGCTGTTTTTTAAACATGCTTGCCCACGCGCATATAGCTACGCGTA TGATGACAAGACCAGCACATACACATGTGCCTCAGCTAACTATTTGATCATTTTCTGCCCCTTACCCTATACAAGGTACA ATTACTCTATCATCATCCTGTATGATTTTGTTGGGTTTGACTTGCTTATAAATATTAAGGGCAATTGTGACATTTCATTG TCATGTGTGATTGTTATGGAAAGTTAATTCAGCTAGATGGGCCTTTCTTTGTAGAATGGGGGGTTAAGTTATTAATGTTT AGTAGATAAAAACTATGTTGTGTACTAGAGTTTAGGCCTGTCCACCGGTCGGGTTCGGTCGGATTCGGGCCCAAAAAGCT CCACCGACCGAACCCGCATGAGACAAAACTGGGCCCATAACCGACCGTGGGTTGTGTCGGTTTCGGGTTGGTCAGGTAAC GGGCGGGTCGGGCGGGTTCCACCGGGTTTGCAGAGAACATCAGAACAGAAAGATGAAGAGCATGGAACCCTAATTTGAGT AATTCCATTCAATTTCATCAAACAAATTAACCAAGAACAACATACTATGTCAGATCAGATCTGGAGATACCATTACCAAC TTACCATGAAGTCAAGAACAAGTTTTTTCCATTGCTTTTCTCATGCGAAAGAGAATGTTCACTTCATCCTTGCGATTTCA CATCAGAATCGATGGCAATGAAGATGAGCAAACTCTTTCGAATCAGAGAAGCATGGAGGTTTGAGATGTGTGAAGGAAAA AGCCATGCACTATGGTGGTGGAGTGGAGTGGCTAGGGTTTGACTTTTGAGATGTGTGAGGACTGAGGAGATTCTGAGATG GGTGATGGAGATGTCGAAGTCGCGGCGAAAAGGAGGAGGAGAAGGGTGGTGGCGGGAGGATGAGGAGAAGCGTGGTGGCG GCGCAGTGGATGGCGACGTAGAGGATGAGGAGAAGGAAAAAGGGTGGTGGCGGTGCAGACTACAGAGGATGAGGTCATGA GGATTGAGGAGAAGTTTGAGAGCGGAGCAAAGGATGAGGGGAACTGGACTACTGGAGAAGGGTGGTGGCAGCGAGAAGCT AGGGTTTGGAGAGAAGAAGAAGATGAGAAGGGTGGTGGCGGCGGCGAGAACTAGGGATTAGGGAAGAAGAAGAAGAAGTG AGGAGTGAAAGAGAGAGGAGCCGAGCCAGGTTAATAGGGTTTGGGTTTGGGCTTGGGCCGGCTGAAATTTTTTTTTTATA TTGGGTTCGGTCGGACTGGGCTCCAAACCGTAACCGACCGAACCAAACCAACCGGAGCCGGTTTTTTTCCATCCTCAACC CGCCACCCGACCCGCCCGAACCGAGGAGGCCTTTTTTTGTAGCGGGCCGGTCGGGTTCAGTCGGTTCAAAAACTTCTGGA CAGGCCTACTAGAGTTTCGAGAAAATAGATTGGGCTTAGGTAGACTTTTGTGCAAATAAACTCACCTATTTAAAGGTTTT AAGGTCTAAGTCTATCGTAGGCTTTTTTTGTTTGTTAAAGTTTGGTATGACTTTATAGTCTATATAAAAGATTGTGTCAT AATAAGAGTTTCACGCGCTAACAAATTTATTTGTAAGAGTAAAATAGAGTTATGATATATACACACCTCTTCACTTCTTT TCCACATTCATTTCAATCTATTTCTCTTTTCTCTATCAATCAAATCACCTATCACATCTTTACTTTCTCTCTCCTTTCTT CCTATCTCTCTCTTACTCCACCTCTCCACACCTCAAATGAGGTGTGAAGATAACATTATTCAGTAAAATACACTTACCCC CCTTCAGGTTTACCATAAAAACACTTAACCCAATTCTTTTCTAAAATATACACTCCACCCCACTTGTTAACCAGACTTTA ACCCTGATTAAAATTTCTCCAATGAATTATTCTTGGGTGAGCACAAATCCAAACCTCACCTTTGAACACAACCAATCAAA AATTCACACATAATTAATATAAAAAATAAAAAACCAAGTGTAAATTTTGGATAAAAATATGTCCCAATGTTTTTTCAATT TCTCAGAGCTTTTCCTTTTCTTCCCCAACTTTTGCTTCACTTTCAATCTTTTATTTCCCTGTTTTTCTCCGTCTTTCTTC TTGTGTAAACCAAAAATATACCTCCTGCATACTCATCAAGAGGTATACGCATAATTTGTTTGCTGGAGAATTATTTTTGG TTGAATTCTTGAATTCCTGGGTGTCTTTTCTCTGTCCACTAATTCTTGTGGGATCAACATATCCTCACGGAAATCAACTT TGTTCTTCCTTATGAGTTTCATAGTTTTCTGATTTTCTACTTCTTTTTTTAATGTTTATTTGTCCATTGCAAAATTTTGG TCCTCTTGGTCAGGGATAAGATGAATATAAAATGTAATCAAACATGCTAATATAACAGATCTATCCAAGTAGAAAATGAA AACGCAGTCGCTGCACATCTAATTCTAGGAGTTGGAACTGTTTCGTCGAATGGGGAAAAATAGGGGAGAAAGAGGAGCGT GGGGAAGAGGAGGTTCACTTTGGGGGCAAACTCTTTTTTTTTTTTTGGCTTAATTGCAACTTTGGTCCCCGACGTTTACC AATACCACGATTTTGGTCCCCGACGTTTACCAATACCACGATTTTGGTCCCCCACCTAATTTAATTACATGGATGGTCCC CGACGTTGTAGGCCGTGTGCAACGTTAGTCCTACCGTTTATTTCTTAATGGAGGAGGCTTACGTGGACGTCCAATTGGAG AGAGAAAGGAGGTATGAGGAGAGAGGGAAGCACGTGAGTATCACGTGACCCTTATCTGAACTCATTATACCCAAACATCT GACCTCCCTAGAACGAAGAAGGTAACACGATTTAGATCCCTATGGTTTCATATTTGGGTATAATGGGTTCATATAAGGTT CACGTGATACTCACGTGCTTCCCTCTCTCCTCATACCTCCTTTTTTTCTCCAACTAGACGTCCACGTAAGCTTCCTCCAT TAAGAAATAAACGGTAGGACTAACGTTGCACACGACCTACAACATCGGGGACCATCCATGTAATTAAATTAGGTGGGGGA CCAAAATCGTGGCATTGGTAAACGTCGGGGACCAAAGTTGCAATTAAGCCTTTTTTTTTTTGAAAATGGGGCAAATTTAA TCAGGGTTAAAGTGTGGTTAACAAGTGGGGTGGAGTGTATATTTTAAAAATGAATGGGGTTAAGTGTTTTTATGGCAAAC TTGAAGGGGGTAAGTGTATTTTACTCTATTTGTAAATAAAGTTATCAAACTTAGAGGCTAACATGTTAAAATTAAAATGT ACTATAAGCAATATTTCTGTAAACAAACAAACAATGTTACAAGCTACTAAGTAAGGATGAAAGGAAGCTATATTATGTTG GCTTTGTTAGGGTCAAATAGTCTATTTAAAATCATACTTCATATTAAGGTATTTAAATAGATTATAAATTCATTTTTAAA TATATTTGAATTATTATATAAGTCAACTTGCTTAAAAATATAAAAATGTGAATAAGTATATAATATCAAGATATTATAAT AAATATCTATCGTAACATTAATAGTAATGATAAAATATATTTATAAGTCACATTTATTTTACTAGCTTGTTAGACTTATA AGTATTTTGAATGGTCTGAGCATAGTAGGTTTTTAAAAAAGCCTAAGCTCATCTATTTATTGTGTTGGCCTGGTTTGCCC TAGACTTGATGTAGGCTAGGTTATAAGCGCTTATGAAGGGTCTGAATTATTCTCATCCCTAGTTACCATTGATTGATTTG GACCGTAGGATTGGACTCCTTATGTGTAGTATCTTCTAGCAATGAATTTGAATTGATTAGCTTAGGTGGATGAGGTTCCA TCTTTCTTGCCTTTGATTCATTCTGCAGATTCTGATGTACGGGCTTCCAAGCCTCCTATGATTTAATATATTGCAACTAT TCCCTTAAAAAAGAATTGATTAGCTTGTGCTAATGATAATATGAGTTTATTTTTTAAATGAGTAGTAGCACTATAGGAGA GTGATGTTAAAATTAGTCTAATGTGCCACATGGCTTGTACTTTGACCAGGCAGAAAAAAAAAAACAACTCCCATTTTTAG TCCCTTGAATTAGGCACAATAGCTGGTTGCTTACTTGCTTCAATTCCACTCAATATAGACCTCCCAGATATGGGCCTATA TTATTACATTGTGTAAACTAATATTATTACATTGTGTAAACTAATCTCTCACAAGAAATAATTTGAAAACGCTCGAATTA TATTTCCATGTTTTTACTTAGTTTGTTTGGATAATAGTTAATTGCAACATGAACAAACTTCATCACAATCTATAAGAAAA TGTTCATTCACTTTTGTTCATGCAGTGAACCGTATATAACTAGCAATTCGCACTGAAGTTTTAGAATACAAAAATGAACA TCTTGTCTTCATCCATCCCCCTCTCATAGAGTTATAGTGATATATTTTTATTACATCAATAATAATAATGATTGCTCCCC TTTACTACCCCAAATTACATCTTATTAAACATCTGTGACCAGGCTGAAGAGATCCCTGATATCTCGATCGTCCTATATCT TGCCCAGTCGAACACTACATGTCCATGAGCCCCCAAGACACCAAGTTCAATTGACCGATGCATCATGCTTTTCATAAGAG ATATTCATTTGGTATTACTGGTGCATAGGATATACAAACGTTGCCTTAACACTTGTTTATCTGCTAAAAAGTGGTCATTG CTTGTATGTAGCTTTCCACTAAGTTTCCAAACTTGCTTTTCCTAGTGATGTTTGTATTTTTTCCTAGGCTTGTTTGCTTT TTATGGCCAATATTCCGCTCCTGAATCACATAATAGGACAGGTGTGCATGCACGATAGAGATTTCTGATTTTTAATTAGA CTTGAAAGTTTTGCAACATTGACATCTTTAAGACTTGCCAAAACAAAGACATCTTTAAGACTTTTGTCATCTTCTAGGTA TAGTGTGTAGCTGCAATGGCATCAAAATAAAAAAACTTTTGAGTGCGTGTATCTGTCATGAACCAGTTATCCTAAAAGCG CTTAAGTTATTAGGTATAGGACACATGAATGATTTTATATACCTAACAATATCTTTTGTGGCCTTGAGCAGCCAAAAACT GTTGGGAGCACATAAAGATGGCGCAGAGCTTCCTCTGGTAAACAAAACTATGATGTATTTATCAAGACTACACTCAAGCG GTTCTTCGTCAACAGGTCTGGTCCAATTGCAGAGTATAGCTTATGTTGCCTTTATGGCAATGGCATTTTTCTTATCCTAT CCTCCTTAACACTCTTTATGGCTCACACTTCAGGTAGATAGTGACACAAAAAACTAGCTCCTTCTTGTAAGCTCTTCATG ATGCCTCCCTTCTTACTACTTTACATTAAACTATCAAGTGGCTGCTGTGCTGATTCTACTCATGTTGCAGGACTTGAAGG ATATATCATATAGGAAGCACTGTAAATTTTTTCTCTTAATATTCTTATCCCCTCCTCCTTTGATATACGTAGACCTTTGA CTAGTTGATCTATAGCAATCCTTCAAGTCTGATTTTACTTACTGATAGCATGTTTGGATCAGTTTTTCTTTCATCAAAAT CAATTCTAAAATATGAAGCTACTCACAGAAGCTTCTATTCAAAATTGATTATGGCTTCATAATTGGAAGAGTTTCTTTAC AAATTGTATAGTATGGCCTCACAATTAGCACTCTTTACATGTTGATATGAGTCCAATGGTGTTCAGGTTACAAACTTGGA GCTTACTCAAAAGACTATGGAAAAACTTAAGATACAAGGTTTTAGTCAAAAACCTGGACTCTCTTGTAGTGACCACCAAC ATGCTTATGAATCTTTCGTGTGCTGATGTGAAGGGAACAAAAGATGAAATGGTGTAATTTATGTCTATATATCATCTTTA TATTTATGAGCACTAGTTCTCTTTCACCTGCTATACGAAATGAGGAAAGCACCCCTAGTCACCTTCATAGTTGACATCCT TAGGAGAAAGCAAACGAGCTACTGAAGTCCACATGAAGAACAAGTGAAAGCAACATGGCCTCGATCTGCTATCAATATTG GGGTTCAAGGATTAGTAGAAATTTGGTCAAAATAATCCAAGAGGGTCTCAGAGTTTTAATTTTTTGTTTTATTAGGTGAG TGGTTTTTGAAACTTTAAAATCTCAGTTTTCTATCCTCTTCCAAATTTTCATCTTCTCAAACAAGCTGCAAGCACACCGA ACATAGTAATTTTCAATTAGCAATTCAACTTCTCAGGTATATGAAGGCAATCATACATCTAAAGTGAACTTCACTCATCA CTAAAAATACAAATATAAATATAAATCTCATAAACAAGTTCAAATCAAACACCAAAGCACTGGGAATTAAATGAATTGAA TGTATATACAATGATGTGAGGGAGAATTGATTAAGGAGAATCAAAATACACTATGAAATATTGAACTTTGATTTTGTAA
CDS sequence (LotjaGi3g1v0522400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGTCGTCTTCTTCTCTTTCTCATTCTTCTCAGCCTCTTCACATTATCTTTCCTCTCAGAGGTACAATCAGCATCGTT CGAGATCGTCAACAAGTGCCGCCACACGATATGGCCGGGACTACTCTCCGGCGCGAACTCGCCGCCGCTACCCACCACCG GTTTCGCCCTCGAGAGCGGCAAGTCGAGGACCCTTCACTTCCCGAAAGCTTGGTCGGGACGGATATGGGCGCGGACCCTC TGCGGCCACGACCGGGACGGGAAATTCTCCTGCGTCACCGCAGACTGCGGCTCCGACAAAGTGGAGTGCATCGGCGGGGC AAAACCTCCGGCGACTCTGGCGGAGTTCACCCTGAACGGCGCCGACGGGTTGGACTTCTACGACGTGAGCTTGGTGGACG GTTACAACCTCCCGATGCTGATCGTGGCGAGGCGAGGCACCAGGGGTGGTTGCAGCCCCACCGGGTGTCTTGTGGACCTT AACGGTGGCTGCCCGAGGGATCTCAAGGTGGCGCGTGTGAATGGGACTGGTGGCAGCGTCGCGTGTATGAGCGCGTGTGA GGCTTTTGGGGACCCGCGGTATTGCTGTAGTGAGGCGTACTCTACGCCTGACACGTGTGCTCCTTCGGTTTACTCGCTGT TTTTTAAACATGCTTGCCCACGCGCATATAGCTACGCGTATGATGACAAGACCAGCACATACACATGTGCCTCAGCTAAC TATTTGATCATTTTCTGCCCCTTACCCTATACAAGCCAAAAACTGTTGGGAGCACATAAAGATGGCGCAGAGCTTCCTCT GGTAAACAAAACTATGATGTATTTATCAAGACTACACTCAAGCGGTTCTTCGTCAACAGGTAGATAG
Protein sequence (LotjaGi3g1v0522400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGRLLLFLILLSLFTLSFLSEVQSASFEIVNKCRHTIWPGLLSGANSPPLPTTGFALESGKSRTLHFPKAWSGRIWARTL CGHDRDGKFSCVTADCGSDKVECIGGAKPPATLAEFTLNGADGLDFYDVSLVDGYNLPMLIVARRGTRGGCSPTGCLVDL NGGCPRDLKVARVNGTGGSVACMSACEAFGDPRYCCSEAYSTPDTCAPSVYSLFFKHACPRAYSYAYDDKTSTYTCASAN YLIIFCPLPYTSQKLLGAHKDGAELPLVNKTMMYLSRLHSSGSSSTGR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_EUK | 1 | 24 | 24 | - | – | |
| SignalP_GRAM_POSITIVE | 1 | 24 | 24 | - | – | |
| PIRSF | 1 | 282 | 282 | 1.7E-97 | ||
| Phobius | 1 | 24 | 24 | - | – | |
| Phobius | 1 | 3 | 3 | - | – | |
| PANTHER | 3 | 279 | 277 | 1.3E-151 | ||
| PANTHER | 3 | 279 | 277 | 1.3E-151 | – | |
| Phobius | 4 | 19 | 16 | - | – | |
| Phobius | 20 | 24 | 5 | - | – | |
| ProSiteProfiles | 24 | 247 | 224 | 41.695 | ||
| Gene3D | 25 | 247 | 223 | 1.8E-89 | ||
| Phobius | 25 | 288 | 264 | - | – | |
| PRINTS | 26 | 38 | 13 | 9.0E-18 | ||
| SUPERFAMILY | 26 | 247 | 222 | 1.15E-79 | ||
| CDD | 26 | 246 | 221 | 4.61876E-112 | – | |
| SMART | 27 | 247 | 221 | 3.7E-107 | ||
| Pfam | 31 | 247 | 217 | 1.5E-79 | ||
| PRINTS | 74 | 85 | 12 | 9.0E-18 | ||
| PRINTS | 87 | 116 | 30 | 9.0E-18 | ||
| PRINTS | 125 | 141 | 17 | 9.0E-18 | ||
| PRINTS | 237 | 246 | 10 | 9.0E-18 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0522400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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