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Field | Value |
---|---|
Gene ID | LotjaGi3g1v0536900 |
Transcript ID | LotjaGi3g1v0536900.2 |
Related isoforms 9 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | Cinnamyl alcohol dehydrogenase; TAIR: AT5G19440.1 NAD(P)-binding Rossmann-fold superfamily protein; Swiss-Prot: sp|Q500U8|TKPR1_ARATH Tetraketide alpha-pyrone reductase 1; TrEMBL-Plants: tr|I3T314|I3T314_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0536900 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:95348134..95350550) extracted from Lotus japonicus Gifu genome v1.2.
AACAAAGAAAAAAAGATGAGCATCAGTGCAGGGAAGTTGGTGTGTGTGACTGGTGCTTCTGGCTATATTGCTTCATGGAT TGTAAAGAGTCTTCTCCAACGTGGTTACACTGTTAGAGCCACTGTTCGTGACCCCAGTCAGTGCCTCCCTCTCTAGCATG TTTGAATCAGCTTCTCCCTATAATTTTGATTTTGGCTTTATAATCAATTATAGGAGAATTTTCCAAATATTCTCCATACA TTAATTCATTCTTTTACTAATGAATCACATTTGGTTTCTTTTATGAATGATTCTTATGACATGCATGTATGCAGGTAATT CCAAGAAGGTTGAGCACTTGGTTAAACTTGATGGTGCAAAAGAAAGGTTGCATCTGTTTAAAGCAGATCTATTGGAAGAA GGTTCCTTTGACTCTGTTGTTGATGGCTGTGATGGTGTCTTTCATACTGCTTCACCTGTTCGTGGTGCTGTCAAAGATCC ACAGGTTCATTCCACTTTACATAATTGATCAATAATTGAATGTGTTTGCAAAAAGTGCTGATTTTTTTTGCCATATTTAG TAAGTTTTTAGATGATTGAGACAAGAGAGGGAGGAAATGGAAATTTCATTCAAAGATGAACTGTACAAGTGAGCTGTTAA CTGCACTAACTAACATCAGTAACTACCATCAACAGTGACAGAATAGTCACTTAAGTAAAAGATATGAGGTCTGTCATTTT AGTCCTTTGAAAGATAGTTTATATGGAACATAAAGTTTTTTTTTGAAAGAATATAGTCTCTTAAAAGCGACCAATTTAGT CTCTAAAGGGGTAACCTTCAAAGTGAAACCATATGAAATAGAGAGCTTCAAATTAATAAAAATTACATTAAGGATCAGCA TAAGTGTTCCATTTTTTATGGTTTGACTTTTTTGAAAAATTTGTCAGCCGTTAATTTTAAATTTCTTCATTTCAGGTTGA ATTGATTGATCCAGCAGTGAAGGGAACTCTTAATGTTCTTAAATCATGCGCGAAATCACCGACTGTGAAACGAGTTGTCT TAACTTCTTCTGTTGCTGCAGTTATATTTAGTGGAAGGCCTTTAAGTCCAGAAGTAGTGGTTGATGAGACATGGTTTTCA GATCCAGATATCTGTAGGGAATTAAAGGTTTGTGCTATTTTTCCTAAAATTTATTCAGAAATCAAATGTTTTCTCATGTT TTACCTAACTGCTCTCTAACTTTCTTACCATTTTTACTGTTTGTGTTTTAAGAGGTGGTACTCACTTTCAAAGACTTTGG CTGAGGATGCTGCCTGGAAATTTGTAAAAGAAAACAAAATTGACATGGTTGTTATTAACCCTTGCATGGTGGCAGGACCT CTCTTACCACCAGAGGTTAATTATAGTGTTGAGCCAATTTTAAACCTAATTAATGGTAATTTTCATCTACACGCGAACTT ATGCTCCATAGAATGTCTACTATCTGTTTTGCCTGCATCTTTGAATGGTAATTTCAAGAATTTTTTGAATTGCTTGATGC AGGTTTCCCATTTCCAAATTTTTCTATGGGATGGGTCAATGTGAAAGATGTTGCTAAAGCACATATTCAAGCATATGAGA TTGCTTCAGCTAGTGGAAGATATTGTTTAATTGAGAGAGTGGTACACTACTCTGAAATTGCAAGGATTTTAGGTGATCTG TACCCAACATTACAAATTTCAAACAAGTAAGTTTGATTTCTATGACTCAAAGATTTGGGATCTCCATTCATTGAAAAAAT AACCCTTTTTTAGTGCTTTACTGGCTTCACCATATCTATTCTTCTCCCACCAGATAAGATATGTGTTCTATAAAATCTTT TAACTCTACCAGGCCTTTGGAGTGAATGAACCTTTGGTTTTGATATGCTGTCAAACTTTCATTTTAACTTGTTCATCAAG TATCCTATCTTGGGTTGAGTATCCAATTTCATCTTTGTAACAATGAGATTACCTTCTTTTCAGTTGCTTACCACCTCACA CATGAGATTGCATGTCACATAGGTAATCCAATAGTTAAATGTAGAGGGAGCTATGTCAAAAACTATATTAGGCAAAGCAT TAAAATTGAATTTGATTTAAATAGTCAACCACTAATTAATGACATGTTCCTTAACGAGTTATAGCGTATCTTTTATCAGA TTGAATGTGACTTGAATCACAACTTTTTTCGGCCAACCTTATGTCAGCATTCAAATACTTTGTTTTTAATTTTTTTCTAA TGACATGTTCACTTTCTCTACCATGTTAACAGGTGTGAGGATGATGGGCCGTACACACCAACATATCAATATTCTCAAGA AAAGGTTAAGAGCTTAGGAATTGAGTTCACTCCTTTGGAAATAAGTATCAAGGAAACCGTTGAAAGTTTTAGAGAAAAGA AGATTGTCAAATTTTGA
CDS sequence (LotjaGi3g1v0536900.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAGCATCAGTGCAGGGAAGTTGGTGTGTGTGACTGGTGCTTCTGGCTATATTGCTTCATGGATTGTAAAGAGTCTTCT CCAACGTGGTTACACTGTTAGAGCCACTGTTCGTGACCCCAGTAATTCCAAGAAGGTTGAGCACTTGGTTAAACTTGATG GTGCAAAAGAAAGGTTGCATCTGTTTAAAGCAGATCTATTGGAAGAAGGTTCCTTTGACTCTGTTGTTGATGGCTGTGAT GGTGTCTTTCATACTGCTTCACCTGTTCGTGGTGCTGTCAAAGATCCACAGGTTGAATTGATTGATCCAGCAGTGAAGGG AACTCTTAATGTTCTTAAATCATGCGCGAAATCACCGACTGTGAAACGAGTTGTCTTAACTTCTTCTGTTGCTGCAGTTA TATTTAGTGGAAGGCCTTTAAGTCCAGAAGTAGTGGTTGATGAGACATGGTTTTCAGATCCAGATATCTGTAGGGAATTA AAGAGGTGGTACTCACTTTCAAAGACTTTGGCTGAGGATGCTGCCTGGAAATTTGTAAAAGAAAACAAAATTGACATGGT TGTTATTAACCCTTGCATGGTGGCAGGACCTCTCTTACCACCAGAGGTTAATTATAGTGTTGAGCCAATTTTAAACCTAA TTAATGGTTTCCCATTTCCAAATTTTTCTATGGGATGGGTCAATGTGAAAGATGTTGCTAAAGCACATATTCAAGCATAT GAGATTGCTTCAGCTAGTGGAAGATATTGTTTAATTGAGAGAGTGGTACACTACTCTGAAATTGCAAGGATTTTAGGTGA TCTGTACCCAACATTACAAATTTCAAACAAGTGTGAGGATGATGGGCCGTACACACCAACATATCAATATTCTCAAGAAA AGGTTAAGAGCTTAGGAATTGAGTTCACTCCTTTGGAAATAAGTATCAAGGAAACCGTTGAAAGTTTTAGAGAAAAGAAG ATTGTCAAATTTTGA
Protein sequence (LotjaGi3g1v0536900.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSISAGKLVCVTGASGYIASWIVKSLLQRGYTVRATVRDPSNSKKVEHLVKLDGAKERLHLFKADLLEEGSFDSVVDGCD GVFHTASPVRGAVKDPQVELIDPAVKGTLNVLKSCAKSPTVKRVVLTSSVAAVIFSGRPLSPEVVVDETWFSDPDICREL KRWYSLSKTLAEDAAWKFVKENKIDMVVINPCMVAGPLLPPEVNYSVEPILNLINGFPFPNFSMGWVNVKDVAKAHIQAY EIASASGRYCLIERVVHYSEIARILGDLYPTLQISNKCEDDGPYTPTYQYSQEKVKSLGIEFTPLEISIKETVESFREKK IVKF
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
PANTHER | 4 | 320 | 317 | 4.2E-178 | – | |
PANTHER | 4 | 320 | 317 | 4.2E-178 | – | |
SUPERFAMILY | 4 | 318 | 315 | 3.94E-67 | ||
Gene3D | 7 | 324 | 318 | 6.0E-134 | – | |
CDD | 9 | 299 | 291 | 3.44231E-154 | – | |
Pfam | 9 | 241 | 233 | 1.6E-22 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. | ||
Molecular function | Coenzyme binding | Interacting selectively and non-covalently with a coenzyme, any of various nonprotein organic cofactors that are required, in addition to an enzyme and a substrate, for an enzymatic reaction to proceed. |
Expression pattern of LotjaGi3g1v0536900.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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