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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0543200 |
| Transcript ID | LotjaGi3g1v0543200.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Sugar transporter, putative; TAIR: AT5G17010.1 Major facilitator superfamily protein; Swiss-Prot: sp|Q6AWX0|XYLL2_ARATH D-xylose-proton symporter-like 2; TrEMBL-Plants: tr|G7JSQ2|G7JSQ2_MEDTR Sugar porter (SP) family MFS transporter; Found in the gene: LotjaGi3g1v0543200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:95936548..95942553) extracted from Lotus japonicus Gifu genome v1.2.
CAGTTAATATCGTATCAAAATAATCAAGTTAACTCATGTTGCATGCTATAGGGTTGATGAAATGGATATCTATTTTAACT TTCTTTTTAGATTTTTTTTTATCTTCTTTCTGGTTGATATTGATTAAACAATTTAACAACTTAAAAAACAAATTGGCATC ATTTTGTGTTCACTATCTCCCACTGATCTATCTTTTGACAGTAAGTTATAATTAATTTGTGGTACTTTTTCAAGTGAAAA AGGAGATAAAATAAAATAAATGCTCTGTCTGTAGTCTTATCTAAAATTTGTTTTAAAATCTCAGATTTCTCTTCCCAGCT TTTGGTGGCCTACTATATGGTTATGATATTGGTGCCACATCTTGTGCAACAATTTCCATTGAGGTATACCCTGCTACTAT AATTTAGGTTTTGACTTAACATTTTTATAATATTCATTTGGTGGTAAGGCGCTTGTAATAATTTCCTGATCTTAAGAGGT CCCGATTTTTCTGCTGTATATCACTAATTAGTAATTACTTTTTGTCCATCTGAAGTATAATTTCATTGCAGATTAGTTTT TTCTTAGTTTATCTGTAATGCTTTCCATATACTTCATTGGATATGCCTATGGTGATTACTGATTAGTTGTAATATGTATT GCATTGCATCATACAGATCCTTATAACAGTGGCTTAACCAGTAAATTTATTTTCAGTCCTAACAGTTACATGAGCTCTTT AATTTTGTTTTTATGCTTCGATATATTTTCCCCTGTCCAAGCCATCAATAGAGATTCAAGCTACATATGGAGTGTGAAGA TTATATAGCTAATTTTTTCTAATTTCAATTTGATATTGAACTGGAAATCCACGGGTCCAAGTAAAATTTTGGACAGAGGT GGGTGGCTCAGTATGGATCTAGGATAGGCTTTGTTCCATCTGAAGAATTGCCATATAGGTAAACTTTTTAACCTAGTGTG TTAATAATTGGTAAGGAATAAAGTCCTGAAGCAACTCATTCATATTAAAAAAATAAAATTGAACTATTTCATTTTCCTGC AAGAATGGAACTCTTTGGAAGGCCACTCGCCAGTGATAACAACAATGTAGCCTTTTTCATTGTATAATAGAACTGGCTTC TGGTATGATTGGAACCTTATTTATTAAAGTATGATGCTTTCTTATTCCAGGACTAGGATCTTATACAGAAATATAGATAT TTTTTATGCTGACTCCTTTATTGGGTTACTATGACTGAATTTAGTGTAACACCGACAGTTTCTTTGGAAGCTGGTATTCA GTTGTATTTTTTTAATGGTTTGGCTGTATACTCATAAAGTTGTATTCCCTTCTTTGCAGTCATCGACTCTAAGTGGAATA ACTTGGTACAACTTGTCTTCTGTTGAAATTGGTCTTGTTGTAAGTTTAAATTAAATTCTTGCTTTATTCTTTTTTCGGCT AATGGTTACATTACATTACCCTTTTTTCATTCTTATGATACATTTGTTATTATATATTGATCTTGAATATTAACTCATTT GCCGGTGCTTGATGTCTGTTGCAGACTAGTGGATCACTATATGGTGCCTTAATTGGCTCTGTGTTGGCCTTCAACATTGC TGACTTCTTAGGCAATTTTCATCTTTTATCAGTTACCATTTTAGGTATTTCGTCCGTGGGGAAGCTGACATGACAAATTT GAAATTTAGGTAGAAGAAGGGAGCTACTTGTAGCTGCATTGATGTATCTTGTTGGAGCCCTTGTAACAGCATTAGCTCCT AATTTTCCTGTATTGGTGGTCGGGAGATTGGTGTTTGGCATAGGAATTGGACTGGTATACTCTTTTTTACCCAATACTGA GCTTGTAAATGTTAGTTTCTAATTTGTCGAGGTAGCAAACCACACAGACAACTGGATGTGTAGGATTTCAGTCGTTTGTC TTAGAAAAGTTAAGGATCTGTGGGCCTACACTTAGGAGAGTTGGTTCTTGACTTGATATTAGAGCTTCCCAAATTAAGGG TTGGGGTCATTTCCTTCATTCTTTATAACTAAATTGAGTTTATAGACAGGGAATGGGGGACCTCTACTTCTTCAATGCTT CGGTTCAAGGGGGCAGAGGCCGAGGGAGGGGACAGGGCCCTGCCATGGTAGTGGTACACCCCTTCTAATTTTCTTTATTA CTAATTTCGTTGATGGCCTCTACCGAATAAGTTAAATTTTCACATAGCCTTTTTTAATTTATGGAAAGTTTTTGCAAAGG ATATAATCTTTACTATTAACCATAAGGTTCTGTGTTCAAACATTCAAGCAATGCACTTATGATGTGCATAATCTCCCATA GAGCATCGCTTGACGTAGTGGCTGGTACATGCTTTTATTATACTCTGAGATTCCGGGTTTGAATCCTCCCACATGTAATT TTCACTTTGTCTAGAATACCGGTTCTAACGCAAACAGGTCTGGTTCTACTGGTTTAATACCGAGTCAAGGCTGGTTCACA GGTCTGATACTGGTTTAACTGTAAAACAATATAATATGCTTGACCGGACTGGCGATAGTTAAGGTTCCTCGTCGGATATG CAAACAATAATATCATATCATAAACTAACTATCCCAAAAATTGAAGTTGTTAGGTTAAGGCGGATAAATGGGTTTATACT TCTATATCTAACAAAGTTATAGAGATCTAGTCAGAGAAGGAGAAAAAAGAAAACAAACCCTGAATAGTATAATAAAATAT TAATATATGGACGTAATAACCCGTCTACATTTAATGTCAACTTGTAATTTAGTGCGATGTATTATATTGTACTTTATACA GTATATGCTTTAGAAATAATCGCAATGGACTAAACTTGCATGGAAACATGAAAAATAAAAAGGGTTATTCTGCATGTACA AAATATTGTTAGTTAAAGAATATTGGAGGTATTGTTTAATCACAGTGTTGTGTATTTCTTCTATGACTCGTGAACTTTGA GGCGAGATAATGATCTTCATTTTATCTCTCGTAGGCAATGCATGCTGCTCCAATGTACATTGCAGAGACAGCTCCAACAC CAATACGTGGTCAATTAATCTCTCTGAAAGAGTTCTTTATAGTACTTGGAATTCTTGTAAGTTTTTGAATGGTATAGTTT CCTCAGAAACAATATTTTATAACCAATATACTTTCTGTTATAGTCTTCTAGTATTATAAAATGGCTATATATCATTTGTA CAGGCAGGATATGGGATAGGTAGCTTGTTGGTAGACACTGTAGCTGGGTGGCGGTACATGTATGGAGTCGGTAGTCCTGT GGCAATTATAATGGGAATTGGAATGTGGTGGCTCCCAGCTTCTCCTAGATGGCTACTTTTGCGTGCTATACAGGGAAAAG GGGATATTCAGAATTTGAAAGACACAGCAATTAGTTGTTTGTGCCAGCTTCGAGGTCAGGCTATTCATGATTCAGCTCCT CAGCAAGTAGATGAGATTCTGGGAGAGCTTTCTTATTTAGGTGAAGAAAAAGAAGCTTCCTTAAGAGATATGTTCCAAGG AAAATGCAAGAAAGCCCTTTTGATTGGTGGAGGATTAGTCTTGTTTCAACAGGTATGTCAATTGATCAAGTGAATTAGTA ATAATTATATGCCAAAACTTTCAATGTATTTACTCTATAGACTGCAAATTTGTGACAGATCACAGGGCAACCAAGTGTGC TCTACTACGCTGCGTCAATCCTTCAGGTGATATGTTAATATTAATCAAATTCATATAATCTATTACCTGGCCCCAGTGGA GTGTAATAACATTGCAATCCTATCTAATTTGGTAGAGTGCAGGGTTCTCCTTAGCATCTGATGCAACTCGGGTCTCTATT CTCCTTGGTGTATTTAAGGTAGATTCCATTTTCTTATATTCTCAATAATTACCCTAATTTATATAAAAACATCGTAGTAG TACTACAGTTCTGTCAGTTTCATATGTTATATGTAGGTCGATGTCTTTTTTTACAATATACAAATTTGAATTATGGATTG TGCATATGAAGTTACCGTTCAAGCTTTGATATGTCATTTATCCAACTCTTTCCTCTGCTATTCTAGGATGCAATGAGTTG ACTGCCTTGTACTCTTTCCTCTGCTATTTTAATGGATTAGAATTTTAGACAATGATGACACTAGCATCCGTAGTTTCACT TCTAATTGATTTCACTTAAATGATGACTCCATGTTTGTGAGTTCCAATATGTCTATGCAAAAGCACTTGTGATACCATTA GTTTTGAACTATTATTGTTAAGAGCAAGGTAAGTTGTTTCTTTTCCATCTTTATGATGATAGAAACCTTCAAAGAGCCAT ACCACAAAAGCTAGTCGTTGTAGTTTGAATATTGCAGTGCAAGGGTGACCACCTGCAGTGCTTGTTTGCAGCTAAGAGAC ATGGTCGAAGACTCTGATACCAATTGATAAAAACCTTGGGAAAACCATATCACGGAAGCTAGTTGTTGTAGTTGGAGAGC TCAAGCCTTATAAACCCCGCATATTGATCTCATACTTACAATGTAGGACTCCAAGTCCCATTCGTTACAAGGGGATTCTA ACATCCAATGTGATATGTCACATATTAAAGGAGAAAAAAAGGGAAAAAAAAAGTGAAGAAGAAGGATTATATATATTTCA TATTTTCCTTGTCTTGCCCCCTCCCGCTTCCGCTCACCCTCCCTCTTGCTCTTTTCATTTTATCCTTTTTCATGCCAAAT GCATGACCATCTACTTCTATCCAGTCACTAATGTTTTCCATGGCAACTTCGTTCTGTTTCTGTTATAGTTGATTATGACT GGAGTTGCTGTTGTCGTTGTTGATAGACTTGGAAGGAGACCTTTACTACTTGGAGGAGTTTCAGGGATGGTAAGTTCCTT CTTATTGACAGATGGTTTTCTTTAGCAATTTCCTGAGAAAGAAACCCTTCTGCATTTCTGGCCAGTCTGCAAATTAGTCC TGTGTGCATGGTCAGCGTCAACTAAGCTAATTATACAAGACAAATGATTGTAACATGGAAATTTCAGTTGTGAGACAATG TTCAAAAATTACGAGCACATTGGTATTTGTACTGCAGGTGATCTCTTTATTCCTTCTGGGTTCATATTACATTTTCTTGG ATAATGCAGCAGTTGTTGCTGTAGTTGGTCTGCTTCTGTATGTAGGCTGTTATCAGGTGAATAAGCTTATTTTTGTTTTC ATTCTTCATATCATTATCATGATTTGTATCATGTTTGCTGGAACCTTTCACCTAGAAAAGGAATATCATTTTTTTTCTCA AAATGCTCACATAAATCTCTCTTTTTTTCTTTCTCAGATTTCGTTCGGTCCAATTGGTTGGCTCATGATATCAGAGATTT TTCCCTTGCGCCTAAGAGGTCGAGGGCTTAGTATAGCTGTACTTGTGAATTTTGGTGCAAATGCCCTGGTGACATTTGCT TTCTCCCCACTGAAGGTGATGAAGATCTTGAACTGGAGATCATATATTCTAAATCTAGCATCATCAATCAGATGATTGCA TATTTTGCAAGGATCTGATCTTACAACATCATACATAAGCATGTGATTCTTTTGTTTTTTTCCCTTCAATTGCATATGCC ATGTCTTTTTATTGAAACTGGTGTTCATGTGAATTATTGAAGATTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGGCTAATTAGGCTGAGAAATGAAGAGAATTTTGTACCC CATTGTTACTGTGCTTAGGCTTAGCTTATTACAAAAACATAATACTGAACTCACTGTTCAGTGACTTCATTGAAATTGCC TCTTACTCTTTGCTTTTGTTTGTGTAATTCACAGGCATTGCTGGGAGCAGGAATTTTGTTTTACATATTTTGTGCAATAG CCGTGGCATCCCTTGTATTCATATTCTTTGTTATACCAGAAACCAAGGGGCTTACACTGGAGGAAATTGAGGCCAAATGC CTGTAA
CDS sequence (LotjaGi3g1v0543200.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTGCATGCTATAGGATTTCTCTTCCCAGCTTTTGGTGGCCTACTATATGGTTATGATATTGGTGCCACATCTTGTGC AACAATTTCCATTGAGTCATCGACTCTAAGTGGAATAACTTGGTACAACTTGTCTTCTGTTGAAATTGGTCTTGTTACTA GTGGATCACTATATGGTGCCTTAATTGGCTCTGTGTTGGCCTTCAACATTGCTGACTTCTTAGGTAGAAGAAGGGAGCTA CTTGTAGCTGCATTGATGTATCTTGTTGGAGCCCTTGTAACAGCATTAGCTCCTAATTTTCCTGTATTGGTGGTCGGGAG ATTGGTGTTTGGCATAGGAATTGGACTGGCAATGCATGCTGCTCCAATGTACATTGCAGAGACAGCTCCAACACCAATAC GTGGTCAATTAATCTCTCTGAAAGAGTTCTTTATAGTACTTGGAATTCTTGCAGGATATGGGATAGGTAGCTTGTTGGTA GACACTGTAGCTGGGTGGCGGTACATGTATGGAGTCGGTAGTCCTGTGGCAATTATAATGGGAATTGGAATGTGGTGGCT CCCAGCTTCTCCTAGATGGCTACTTTTGCGTGCTATACAGGGAAAAGGGGATATTCAGAATTTGAAAGACACAGCAATTA GTTGTTTGTGCCAGCTTCGAGGTCAGGCTATTCATGATTCAGCTCCTCAGCAAGTAGATGAGATTCTGGGAGAGCTTTCT TATTTAGGTGAAGAAAAAGAAGCTTCCTTAAGAGATATGTTCCAAGGAAAATGCAAGAAAGCCCTTTTGATTGGTGGAGG ATTAGTCTTGTTTCAACAGATCACAGGGCAACCAAGTGTGCTCTACTACGCTGCGTCAATCCTTCAGAGTGCAGGGTTCT CCTTAGCATCTGATGCAACTCGGGTCTCTATTCTCCTTGGTGTATTTAAGTTGATTATGACTGGAGTTGCTGTTGTCGTT GTTGATAGACTTGGAAGGAGACCTTTACTACTTGGAGGAGTTTCAGGGATGGTGATCTCTTTATTCCTTCTGGGTTCATA TTACATTTTCTTGGATAATGCAGCAGTTGTTGCTGTAGTTGGTCTGCTTCTGTATGTAGGCTGTTATCAGATTTCGTTCG GTCCAATTGGTTGGCTCATGATATCAGAGATTTTTCCCTTGCGCCTAAGAGGTCGAGGGCTTAGTATAGCTGTACTTGTG AATTTTGGTGCAAATGCCCTGGTGACATTTGCTTTCTCCCCACTGAAGGCATTGCTGGGAGCAGGAATTTTGTTTTACAT ATTTTGTGCAATAGCCGTGGCATCCCTTGTATTCATATTCTTTGTTATACCAGAAACCAAGGGGCTTACACTGGAGGAAA TTGAGGCCAAATGCCTGTAA
Protein sequence (LotjaGi3g1v0543200.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLHAIGFLFPAFGGLLYGYDIGATSCATISIESSTLSGITWYNLSSVEIGLVTSGSLYGALIGSVLAFNIADFLGRRREL LVAALMYLVGALVTALAPNFPVLVVGRLVFGIGIGLAMHAAPMYIAETAPTPIRGQLISLKEFFIVLGILAGYGIGSLLV DTVAGWRYMYGVGSPVAIIMGIGMWWLPASPRWLLLRAIQGKGDIQNLKDTAISCLCQLRGQAIHDSAPQQVDEILGELS YLGEEKEASLRDMFQGKCKKALLIGGGLVLFQQITGQPSVLYYAASILQSAGFSLASDATRVSILLGVFKLIMTGVAVVV VDRLGRRPLLLGGVSGMVISLFLLGSYYIFLDNAAVVAVVGLLLYVGCYQISFGPIGWLMISEIFPLRLRGRGLSIAVLV NFGANALVTFAFSPLKALLGAGILFYIFCAIAVASLVFIFFVIPETKGLTLEEIEAKCL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 3 | 3 | - | – | |
| Phobius | 1 | 26 | 26 | - | – | |
| Gene3D | 3 | 457 | 455 | 2.5E-112 | – | |
| Phobius | 4 | 16 | 13 | - | – | |
| ProSiteProfiles | 6 | 447 | 442 | 52.106 | ||
| PANTHER | 7 | 458 | 452 | 4.4E-247 | – | |
| PANTHER | 7 | 458 | 452 | 4.4E-247 | – | |
| TMHMM | 7 | 29 | 23 | - | – | |
| TIGRFAM | 8 | 454 | 447 | 1.3E-95 | ||
| SUPERFAMILY | 8 | 455 | 448 | 2.75E-62 | ||
| Pfam | 9 | 456 | 448 | 3.4E-100 | ||
| CDD | 9 | 454 | 446 | 0.0 | – | |
| PRINTS | 14 | 24 | 11 | 7.0E-25 | ||
| Phobius | 17 | 26 | 10 | - | – | |
| Phobius | 27 | 49 | 23 | - | – | |
| TMHMM | 49 | 71 | 23 | - | – | |
| Phobius | 50 | 68 | 19 | - | – | |
| ProSitePatterns | 67 | 84 | 18 | - | ||
| Phobius | 69 | 79 | 11 | - | – | |
| Phobius | 80 | 98 | 19 | - | – | |
| TMHMM | 80 | 98 | 19 | - | – | |
| Phobius | 99 | 103 | 5 | - | – | |
| TMHMM | 103 | 125 | 23 | - | – | |
| Phobius | 104 | 126 | 23 | - | – | |
| PRINTS | 104 | 123 | 20 | 7.0E-25 | ||
| ProSitePatterns | 109 | 134 | 26 | - | ||
| Phobius | 127 | 137 | 11 | - | – | |
| TMHMM | 137 | 159 | 23 | - | – | |
| Phobius | 138 | 156 | 19 | - | – | |
| Phobius | 157 | 167 | 11 | - | – | |
| Phobius | 168 | 187 | 20 | - | – | |
| TMHMM | 174 | 196 | 23 | - | – | |
| Phobius | 188 | 260 | 73 | - | – | |
| Phobius | 261 | 284 | 24 | - | – | |
| TMHMM | 262 | 284 | 23 | - | – | |
| PRINTS | 272 | 282 | 11 | 7.0E-25 | ||
| Phobius | 285 | 303 | 19 | - | – | |
| TMHMM | 299 | 321 | 23 | - | – | |
| Phobius | 304 | 322 | 19 | - | – | |
| ProSitePatterns | 317 | 333 | 17 | - | ||
| Phobius | 323 | 328 | 6 | - | – | |
| TMHMM | 328 | 350 | 23 | - | – | |
| Phobius | 329 | 350 | 22 | - | – | |
| Phobius | 351 | 355 | 5 | - | – | |
| TMHMM | 354 | 376 | 23 | - | – | |
| Phobius | 356 | 381 | 26 | - | – | |
| PRINTS | 359 | 380 | 22 | 7.0E-25 | ||
| PRINTS | 382 | 394 | 13 | 7.0E-25 | ||
| Phobius | 382 | 392 | 11 | - | – | |
| TMHMM | 389 | 411 | 23 | - | – | |
| Phobius | 393 | 412 | 20 | - | – | |
| Phobius | 413 | 417 | 5 | - | – | |
| Phobius | 418 | 443 | 26 | - | – | |
| TMHMM | 421 | 443 | 23 | - | – | |
| Phobius | 444 | 459 | 16 | - | – | |
| Coils | 449 | 459 | 11 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi3g1v0543200.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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