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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0011200 |
| Transcript ID | LotjaGi4g1v0011200.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | O-fucosyltransferase family protein; TAIR: AT1G62330.1 O-fucosyltransferase family protein; Swiss-Prot: sp|Q8W486|Y1491_ARATH Uncharacterized protein At1g04910; TrEMBL-Plants: tr|A0A151STW2|A0A151STW2_CAJCA DUF246 domain-containing protein family; Found in the gene: LotjaGi4g1v0011200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:1388606..1392883) extracted from Lotus japonicus Gifu genome v1.2.
GTCCACGCAAAATCTAGAGATTCATTTCGTTTCATTTCTTGTCTCTGCGCTTCAAACTCTTCCTTTCAGACTTCCATTCG GATCCAACCCGAACCCGAATCATGGTATCCAGTTTGGAGGCGGTGGTTGCTGATCGGAGCCGGTCCAGCTCCCGGACGCC GAACCATTCGCCGAGGCTTGGCCCGAGCCGCCTCTCCTCCAGCTCCCATAGATCCCATTCTCCTTCTTCTTCACTTTCCT TATCATCATCATCATCGCATTGGTATCGAAGGAAAAAAGTGCTTCTGGCGCTTATGGTGTTGCTAGCTTTCTTCTTCTTT TTGAATTGGATTATGCTCCTCGGCTTACAGCACCATCACCATGAAGAATACGAATCACCCAAACGCCGTTCCTCTCTTTC TCTCTCGCTTCTTCAGGTCTGTGTTTGTCTCTGCTTTATTATCATTCAATCACATGATTTTGATTGCACTGGACTCATAT AAAGCATTTTTAGAAACTCTGCTGTGATGTGATGTGTTATACTTATGATGGCTTATATTTCTTGGCCTCTGAATGAGTTT CTTCCTTTTCGTTCGTTCTGATGCTTGTTTTACAGGGAAAATGGAACAAGACTGGAAACAGGAAAAAACCACAAAAGGGT AATTATGTGAGGATGTTGGCATTGGCTGCCCACGCCTTGGCAGAGGTATGTAGTATGTACTATATTCAGAGATCCATGTC TAGTTGGGGTCTTATTGTTTTCGATTTTGGTGATGTTGAAAAACATTCATTAATGTTGAACGATTTGTGTTTAAACTGTG TTTTAATCTTGAGTTTACAATAATTCATCTTGTCTTTTGAAGCTTAAACGTGTAGAATCAAGAAAAATGTCAGCAACATT CACTTTAACATACTTTTTACAACACTCTTTCATTGACCGATAACCCTTATATGGCAGACATCCAAATTTCAAATACTATC CAACAGAAAAGATAAAAAATTCATTTTTAGATTTGGTTCTACTCTCTGCGGAGTTTCTTTACTGCGTATTTGAAAATCCG GTAGGTTTTCACGTTGGGGGGAAGAAGTGATTCTAGGAGAAGCTACTAGAAGTAGCTGTCATGGAGGAGAAGTGATTTTT GGAGGGTTAATCGTGGGTCCGATCACAATGTGAAATGCCAAATTAACCAAGCAGCATTAAAACTTTCGAAACAGAGGTTA CCTAGTGCAAGCTACTAATTGCATCTTAGCCAAGCAGTCTGTTGGTAGTCATAAGACTCAAGTTATAGAATTTATTTTCC AATTACTTGGTAGAGTAAAGTTTTATAGGAGCAAGTTTTCAGAAACACTGACTTTTTGTATGTTATGGGACAGAATAAAC GTGAACCAAAAGATTTGTGGCAGGAACCCTTGGTTCCTGCTTCTGCTTGGAGACCTTGTGCTGATCAGCGAAATTGGGAA CCTAATGGTAAGTGTGTCTGAAATTTAATTTTTGTTTATATAATGCCTCATTGATTCATAATAAAGGTGATATTCACTGT CTGCTCTCTTCCACTGTACTCAAATAGAAGGAAATAATGGATATATTTTGGTTACCGCAAATGGCGGGATCAATCAACAA CGAGTAGCTGTAAGTATTCTATATTAGGCTGCTTTATTTTATTATGATCATGCTTCTGAATTAATAGGGTTTAATTGATT TTCGAGGAGAAAAGGCCAAGCTTTATTTTAATGATTACTGTGTAATTTGTTTTAATTTTGATTCATAACAGGTTTGTAAT GCTGTTGTTGTGGCCCGGTTACTCAATTCAACTTTGGTTATCCCCAAATTTATGTACAGTAGTGTATGGAGAGATGTGAG GTAATGTTCTTTCCAGCTCTCTTTCTTCTTTCGCTTCCTCCTGATCCTCACATATTTTTCTGTTTTATTTTCCTAATATC CGCTTTAGTTAATAAAACCGATGATCTAGCTAGGACTTTGACCAATGCTCAGTTCTGACATTGATGATTAGTGGAATGTT ATAATATGCATCTGGGCTTTGATTAGGATATATTAAGATTTATGAATAATTTTGGTTGATAGGTTGCACATGACTTAAGA GTTTATTTCTCATGTATTTGTGGGGCAAAATAGCTTATTGGAATTTCTAGCTTTTTCTTTTGTCATGTATTATTTCAATG CCACATGGCCCACACCTGCAATCCATGGGTCTTATAATTGCTTATTGTATACTTTCATAGTCAATTCAGCGATATCTATC AGGAGGAGCATTTTATCAATTACTTGACTCCTGATATTCGGATAGTCAGGGAACTTCCCAAGAAACTACAGTCTTTGGAC TTGGAGGCGATAGGCAGTGTTGTAAGTCACTTCCTGCCCATGCGAGGAAACTGATTAAACTCTACTTTATCACTTGTATT TGTTTTTAATTGTTTAGAACATGTTTCCAGGTATCAGATGTTGACATGGGGAAGGAGGCCAAGCCAAGTTTTTACGTGAA ACACATCCTACCCATTATACTTAAAAATCAAGTTATTCACTTTGTTGGATTTGGGAATCGCTTGGCATTTGATCCGATAC CATTTGAGCTGCAGGTAAATGTCCTTTGATGCTTAAACATTACATTATGTTTTTCATGATTTCAAGCTCTGCAATGGTCT ACTATTACCGTCTTTCTGATTTCAATCTACTATGCTCTTCCTAATTGGGAAATTCATTTAGAGACTTCGTTGCAGATGTA ACTTTCAGGCCTTGCAATTCGTTCCCAGAATACAAGAAATTGGTGCTTTGCTTCTTAAAAGGTTACGGGAAGATACAGCT CATATTGGACCATTGGATCATTATCTTGTTGGTTCATTTGCAGAATCAGTGAAGGGGAAAGGTGGAACTAATTCCAAGAA AGTATCCAAATACCTAGCTTTACATCTCAGATTTGAAATTGACATGGTAGCTCATTCTTTATGTGAATTTGGGGGAGGTG AGGAAGAGAGGAAAGAATTGGAAGCATATCGTGAAATCCATTTTCCTGCATTGGCACTACTGAAGAAGACTACAAAGTAT GCATCATAATCCTTTTATCTGAAACTGTTTCCAACTTATACTACCAGGATTGGAAAGATTCGGCGTTCATGCTTATCTTC TTTTACATACCATGATTTTAATTTATGATGAGAAAAGCCTTACTGTTCAATTCTTTGACTTAAATTAATTGTAATCTGTG CAGATTACCTTCTCCTTCAGAGCTCAGGTCTGAAGGCCTATGTCCTTTGACACCTGAAGAAGCCATCCTCATGCTTGCTG CACTTGGTTTTAACCGCAAGACACACATATATGTAGCTGGTTCTAATCTGTATGGAGGTCGCTCACGGTTGGTTGCTTTG ACCAGCTTGTACCCTAAATTAGTCACTAAAGAGAACTTACTTTCTCCAGATGAACTCAAACCGTTTGCTAATTATTCATC TCAGGTTTGTTGCTATTGTCATTCTTGTTCCAGATGTGTTAACATCTTACAGATCTAATTGAGTCCCTTATTATGGGAAA TTTTGTTTTATGCGTTACTTTTTTGTACATTGCTCCTCATACTGAATTATTCAATTTTTGGCATTAATCGGGAATGGTTA CCTGCTTATCACTCAGTTTTTTTATTTTTTGCCAACAAGATAATTGAAAATGAACACTGCATTTGTTTTGGTTCTACTTT CTATTGTAGTTAGCCGCATTGGATTTCATAGGCTGCACTGCCTCGGATGCATTTGCCATGACCGATTCAGGAAGTCAGCT ATCATCTTTGGTATCCGGGTATCGAATATATTACGGTGGAGGAAGAATGCCAACAATACGTCCAAATAAACGCAGGCTTG CTGATATATTTATGAAGAACTCATCCATAGAGTGGCGTGTTTTTGAACAGAGAGTGAGGAAAGCAGTGAGACAAACTAAA CATGTGCAGACAAGGCCGAAGGCCAGAAGTATTTACAGGTACCCTAGGTGTAAAGAATGTATGTGCAGGACAGATTGATT GATTTATATAGTTTGACTGTAATTGCCCATTGTAATTTTGTAACATTATTGTTCAATGTTCATTTTTCCACTAATTTTTT TATCTGGCTAAATTGGTCAGTTCATGTCATTATAACAACACTCATAACCATTACTTAGGATAAGACTGATCTCTGTCAGA TTGTGACAGTTGTCTTATGTTTTCATGATTTCATCACACTGGTTAGGCCAGAGAGGTTGTGAGAAATTCGTTTATGAATT CCTTCGTATTATGAATTTCTGAGCATTGTTTCATTTCA
CDS sequence (LotjaGi4g1v0011200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTATCCAGTTTGGAGGCGGTGGTTGCTGATCGGAGCCGGTCCAGCTCCCGGACGCCGAACCATTCGCCGAGGCTTGG CCCGAGCCGCCTCTCCTCCAGCTCCCATAGATCCCATTCTCCTTCTTCTTCACTTTCCTTATCATCATCATCATCGCATT GGTATCGAAGGAAAAAAGTGCTTCTGGCGCTTATGGTGTTGCTAGCTTTCTTCTTCTTTTTGAATTGGATTATGCTCCTC GGCTTACAGCACCATCACCATGAAGAATACGAATCACCCAAACGCCGTTCCTCTCTTTCTCTCTCGCTTCTTCAGGGAAA ATGGAACAAGACTGGAAACAGGAAAAAACCACAAAAGGGTAATTATGTGAGGATGTTGGCATTGGCTGCCCACGCCTTGG CAGAGAATAAACGTGAACCAAAAGATTTGTGGCAGGAACCCTTGGTTCCTGCTTCTGCTTGGAGACCTTGTGCTGATCAG CGAAATTGGGAACCTAATGAAGGAAATAATGGATATATTTTGGTTACCGCAAATGGCGGGATCAATCAACAACGAGTAGC TGTTTGTAATGCTGTTGTTGTGGCCCGGTTACTCAATTCAACTTTGGTTATCCCCAAATTTATGTACAGTAGTGTATGGA GAGATGTGAGTCAATTCAGCGATATCTATCAGGAGGAGCATTTTATCAATTACTTGACTCCTGATATTCGGATAGTCAGG GAACTTCCCAAGAAACTACAGTCTTTGGACTTGGAGGCGATAGGCAGTGTTGTATCAGATGTTGACATGGGGAAGGAGGC CAAGCCAAGTTTTTACGTGAAACACATCCTACCCATTATACTTAAAAATCAAGTTATTCACTTTGTTGGATTTGGGAATC GCTTGGCATTTGATCCGATACCATTTGAGCTGCAGAGACTTCGTTGCAGATGTAACTTTCAGGCCTTGCAATTCGTTCCC AGAATACAAGAAATTGGTGCTTTGCTTCTTAAAAGGTTACGGGAAGATACAGCTCATATTGGACCATTGGATCATTATCT TGTTGGTTCATTTGCAGAATCAGTGAAGGGGAAAGGTGGAACTAATTCCAAGAAAGTATCCAAATACCTAGCTTTACATC TCAGATTTGAAATTGACATGGTAGCTCATTCTTTATGTGAATTTGGGGGAGGTGAGGAAGAGAGGAAAGAATTGGAAGCA TATCGTGAAATCCATTTTCCTGCATTGGCACTACTGAAGAAGACTACAAAATTACCTTCTCCTTCAGAGCTCAGGTCTGA AGGCCTATGTCCTTTGACACCTGAAGAAGCCATCCTCATGCTTGCTGCACTTGGTTTTAACCGCAAGACACACATATATG TAGCTGGTTCTAATCTGTATGGAGGTCGCTCACGGTTGGTTGCTTTGACCAGCTTGTACCCTAAATTAGTCACTAAAGAG AACTTACTTTCTCCAGATGAACTCAAACCGTTTGCTAATTATTCATCTCAGTTAGCCGCATTGGATTTCATAGGCTGCAC TGCCTCGGATGCATTTGCCATGACCGATTCAGGAAGTCAGCTATCATCTTTGGTATCCGGGTATCGAATATATTACGGTG GAGGAAGAATGCCAACAATACGTCCAAATAAACGCAGGCTTGCTGATATATTTATGAAGAACTCATCCATAGAGTGGCGT GTTTTTGAACAGAGAGTGAGGAAAGCAGTGAGACAAACTAAACATGTGCAGACAAGGCCGAAGGCCAGAAGTATTTACAG GTACCCTAGGTGTAAAGAATGTATGTGCAGGACAGATTGA
Protein sequence (LotjaGi4g1v0011200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVSSLEAVVADRSRSSSRTPNHSPRLGPSRLSSSSHRSHSPSSSLSLSSSSSHWYRRKKVLLALMVLLAFFFFLNWIMLL GLQHHHHEEYESPKRRSSLSLSLLQGKWNKTGNRKKPQKGNYVRMLALAAHALAENKREPKDLWQEPLVPASAWRPCADQ RNWEPNEGNNGYILVTANGGINQQRVAVCNAVVVARLLNSTLVIPKFMYSSVWRDVSQFSDIYQEEHFINYLTPDIRIVR ELPKKLQSLDLEAIGSVVSDVDMGKEAKPSFYVKHILPIILKNQVIHFVGFGNRLAFDPIPFELQRLRCRCNFQALQFVP RIQEIGALLLKRLREDTAHIGPLDHYLVGSFAESVKGKGGTNSKKVSKYLALHLRFEIDMVAHSLCEFGGGEEERKELEA YREIHFPALALLKKTTKLPSPSELRSEGLCPLTPEEAILMLAALGFNRKTHIYVAGSNLYGGRSRLVALTSLYPKLVTKE NLLSPDELKPFANYSSQLAALDFIGCTASDAFAMTDSGSQLSSLVSGYRIYYGGGRMPTIRPNKRRLADIFMKNSSIEWR VFEQRVRKAVRQTKHVQTRPKARSIYRYPRCKECMCRTD
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 49 | 49 | - | – | |
| Phobius | 1 | 59 | 59 | - | – | |
| MobiDBLite | 9 | 49 | 41 | - | – | |
| PIRSF | 28 | 599 | 572 | 7.1E-176 | ||
| PANTHER | 30 | 598 | 569 | 0.0 | – | |
| PANTHER | 30 | 598 | 569 | 0.0 | – | |
| TMHMM | 60 | 82 | 23 | - | – | |
| Phobius | 60 | 82 | 23 | - | – | |
| Phobius | 83 | 599 | 517 | - | – | |
| Pfam | 172 | 532 | 361 | 1.0E-71 | ||
| CDD | 172 | 536 | 365 | 8.02688E-132 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi4g1v0011200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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