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LotjaGi4g1v0013600.1

Overview

Field Value
Gene ID LotjaGi4g1v0013600
Transcript ID LotjaGi4g1v0013600.1
Lotus japonicus genome version Gifu v1.2
Description 5'-adenylylsulfate reductase; TAIR: AT4G21990.1 APS reductase 3; Swiss-Prot: sp|P92980|APR3_ARATH 5'-adenylylsulfate reductase 3, chloroplastic; TrEMBL-Plants: tr|I3S182|I3S182_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0013600
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr4:1711374..1715513) extracted from Lotus japonicus Gifu genome v1.2.

AGAGATTAATGAAATGATTAAATTAAAATTAAATAAATATGTTTTTTTTTTTATATTTTCAGAATTTTAATTAATACTTC CACCGTTTCTATTTAACTGTCCACCTTAAAGAAATTTTTTTGTTCATATTTTACTGTCCACTTAGCATTTTAAGAGAACA TTAAATGATGTTTTTACAACAAATGTCATTGTCAGTACAATAAATGAGGAGAGATAACACATACTTTAAAGAGTAAAATA GAAAAATAATCATCACTTTTTCTAAAAATCAACAAAATTAATCACACCCTTAATATGTGTGTCTCCACTCAAAGTGGACA GTTAAATAGGAACAAAAACAGTATTGTTTATTACGTGGAGTCCAAGTGGCATCTTAATGGTTAAATGAGTCATAGCAACG TCATTAATGAGCGCCATATATGTAAATTTTGTTTCAATTCAACGGTAGACTGATGGTAGGACCCAATTGACACAAATTGA AAGCATGTGGACTAAAATCACTCGTTCTAAATAAAGGGAATTCAAATTGCACAAAGATCTAACATGAGAGACGAAAAGTA CCGGTAAGTCAAATTATTAAATGATATGCTATTTAATTTTGGTCCTTACAATAAGAGAAAGAAAGAAATTTAAACTCATG AAATTGGAATTATATAATAGTCGTTCATTTCAATCATTCTCCTGAAAACATCATACAATACAATATAATACAATCGACAA TCTGAATAAACCAATAATATTTAGTACACAAATCAGTTCCACCTCCACCTAATGCGATAAGGTAAAAATTAGAGAGAAAT GAGTGATATAATTTGTGATGTGACAGGAAATGCAGAGAAAGATAGGAAGAAAAACATATGAAAATAAAATAAAAGAGAAA ATGAGGTGTGTATATATGATTACTCATGCATAAATCAAACCTTAGCTAAAGAAAACCGAAAAAACCTTAGCTAAAGAAAC TAAAGAAAAATGACACACTAAAAAATATTTATTAAAGGGCTAAAAAACATTTTTGGCCCCTAATGTTTCAAGTTTGTGCA AATTCTGCCCCTACTCTATTTTTGTCGACGTTTCTACTCCTCATGTTTTCAAGCAGTGCACCGTCTACCCCTCCGTCAGT CAGACTTTCTCAGAAGAGTTTCCTGAGTGGATTGGAGAGATGAAGAGGAGTATATGAAGTTGATGATGATCAAGAAAATG ATATAAATTAAATTTGCTTGATGTATATATCAATTATGTATGTAATTGAACTAGTTAAATGCATGTTTTGCTACTTACAG GTATTGAGTTTGAATCTCTCATGCCTCCTTTTTCCAATTTCACTTGTAATTTCCACGTGGCAGGTCCAAAAAATATAAAA AAAAAGCCAAATCAGCTCATTCAGTTAGTTTTTTAACGTCTGACTGACGGAGTGAGGCCCAAAATACCTGGGTCTGTCCC GTGCTTAAGTGTAAGCATCCTGGGCGAGGGAGTCCAGGTCTGTCCCGTGCTTAAGTGTAAGCATCCTGGGCGAGGGAGTC CAAAAGTGATATGTGATGAATGAGCATGAGGAATTGGAATGAAGAATCCAGGAAAGTCGTTCGAGTGGCGGGTAATAAAT TAAAGAATCTGTGACTGTGAGTGACGGATGCCATGAGTCACATGTTTCGTATCACCAAATTCCGTCCAGGTTCAATGAAC CTAAAAAGTCGCCACAAATTTCCATCTCCTTATAAATGACAATCTCAAACAAGAAAAATTCTCACAACAAAATCGAACAA TTTCACATCAAAATTAAACTAACTCTCACACCCTTCAATTCAATGGCTCTCGCTGTCACTTGTTCCATTTCAATTTCATC TTCTTCTTCTTCTTCTTCTACCTTCCAATCATCACAACCTAAATGTAAATCTATATCTGTTTCTATTTTCATCGCAAATT CACTATGAATTCGATTAGTTTCTGTGTTTTGATCTTTTTCTTGTTTCTCAATTTTGGTTTCAGTTTCGCAAATTGCTTCA ATTAGGGTTTCTGAGATACCCCATGGAGGAGGTGTTAATGCATCTCAAAGGCGGAGCTTCGTGAAGCCACCTCAACGCAG CAGGGATTCAATTGCCCCTCTCGCTGCAACCATCGTTGCTTCTGGTACGTAATAGTTTTGTTTCCTTTCTTGATTGAAGT GGAATTGAAACATGTGTTGACTGAGTCAGTGATTGTGATTCTGCAGATGTTGCTGAAACAGAACAGGATAATTATCAACA GTTAGCTGTTGACCTTGAAAATGCTTCCCCTCTTCAAATAATGGATGCAGCTCTCGAGAAATTCGGCAACCACATTGCTA TTGCCTTCAGGTGACACTTCCTCATTCCATCAATTAGGAATAAAAATAATTGAATTGTATGTATGAGCATCATACTTCCC ATCAGAATTGATTTTGGCTTTAGAATGAATTGTAGATTCCGGTCTTATTAGCTATGTTGTGTGTGTAGTGTTATATGGAT TTTAATGGGGTGAGTTTGTTTTGCAGTGGTGCTGAGGATGTTGCATTGATTGAGTATGCACGCTTGACGGGTAGACCCTT TAGAGTGTTTAGTCTTGATACTGGGAGGCTAAACCCGGAAACTTATCGATTTTTTGATGAGGTTGAGAAGCACTATGGAA TCCACATTGAGTACATGTTTCCTGATGCTGTTGAGGTTCAAGGATTGGTCAGGAGTAAGGGGCTCTTTTCCTTCTATGAG GATGGCCATCAAGAGTGCTGCAGGGTGAGGAAGGTGAGACCTTTGAGGAGGGCACTTAAGGGTCTTAGGGCATGGATTAC TGGGCAGAGAAAAGATCAGTCACCTGGTACTAGGTCTGAAGTACCTGTTGTTCAGGTTGATCCGGTTTTCGAGGGAGTCG ATGGTGGGGTTGGCAGCTTGGTGAAGTGGAACCCAGTTGCGAATGTCAAAGGCCACGATATATGGAGCTTCCTTAGGACC ATGAATGTGCCTGTGAATTCATTGCATTCAAAAGGATACATCTCCATTGGCTGCGAGCCGTGCACGAGGGCTGTTTTACC CGGGCAACATGAACGGGAAGGTAGGTGGTGGTGGGAGGATGCCAAAGCTAAGGAGTGTGGTCTTCACAAAGGAAATGTGA AGCAGGATGCGGAGGCGGAGCTTAACGGCAATGGTGTTGCCAATACAAATGGCACTGCCACTGTCGCCGACATCTTCAAC ACCCAGAATGTGGTCAGCTTGAGCAGGACTGGAATTGAGAATTTGACGAAGCTGGAGAACCGGAAAGAACCATGGTTGGT TGTGCTTTATGCACCATGGTGCCCCTACTGCCAGGTAAACTAATTTTCTGTCAGAATTTGTTAGCTGAGCTCATTAACTA TGTTTACCTTGGGTTGAAATGTTTGATCCCTAATGAAATTTCTATTCCAAATTGCAACAGGCTATGGAGGAATCTTATGT TGATCTGGCTGACAAGTTAGCAGAGTCAGGGGTGAAAGTTGGAAAATTTAGAGCGGATGGGGAGCAGAAAGAATTTGCAA AGCGGGAACTGGGGTTGGGGAGCTTCCCAACAATAATGTTTTTCCCTAAGCATTCATCTAGGCCAATAAAGTATCCCTCA GAAAACAGAGATGTTGATTCCTTGATGGCGTTTGTGAATGCCTTAAGATGAGGGTTATCAAGAAGTTCTTTGTTTAGGTT GCCATTCACATTTGTGAGTGCACCTTCAATGTTCCTTGGTCACAGTTCGGGTATACCATTCACTCAGACTGGTAACACAT CAGAAGTGTAGATTCCTTGGCAAAAATAAGATCCTCAGCTTAAACATATGGGCTGTGGCCTCTTTTGAGTAGATTTAGAT CATCTTATTATTGTGGTTACAATAAAAATTATATAGGTGCGGTGAGTTATTGATTTCCTTCCGTTCTAGATAAGTGATTT GTAAATTGTAATTACTAATAATGAGAATGGTGTGGCTTTTTCCTATATGCTGTTCTTTGGACTTTGTTTTGTTTTGGGCT TCCCCCCCTTGTAATGTGGATTGTGGACAACAAAAACAGCATGATTATGTTGACAGAAAAAAACCGCATTATTATTTTGA CAAAAAAAAAACACCATCACTTTGATATTATTATATATGAAAAAGGTTGTTTAGTGCGCA
Download Genomic Sequence

CDS sequence (LotjaGi4g1v0013600.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGACAATCTCAAACAAGAAAAATTCTCACAACAAAATCGAACAATTTCACATCAAAATTAAACTAACTCTCACACCCTT CAATTCAATGGCTCTCGCTGTCACTTGTTCCATTTCAATTTCATCTTCTTCTTCTTCTTCTTCTACCTTCCAATCATCAC AACCTAAATTTTCGCAAATTGCTTCAATTAGGGTTTCTGAGATACCCCATGGAGGAGGTGTTAATGCATCTCAAAGGCGG AGCTTCGTGAAGCCACCTCAACGCAGCAGGGATTCAATTGCCCCTCTCGCTGCAACCATCGTTGCTTCTGATGTTGCTGA AACAGAACAGGATAATTATCAACAGTTAGCTGTTGACCTTGAAAATGCTTCCCCTCTTCAAATAATGGATGCAGCTCTCG AGAAATTCGGCAACCACATTGCTATTGCCTTCAGTGGTGCTGAGGATGTTGCATTGATTGAGTATGCACGCTTGACGGGT AGACCCTTTAGAGTGTTTAGTCTTGATACTGGGAGGCTAAACCCGGAAACTTATCGATTTTTTGATGAGGTTGAGAAGCA CTATGGAATCCACATTGAGTACATGTTTCCTGATGCTGTTGAGGTTCAAGGATTGGTCAGGAGTAAGGGGCTCTTTTCCT TCTATGAGGATGGCCATCAAGAGTGCTGCAGGGTGAGGAAGGTGAGACCTTTGAGGAGGGCACTTAAGGGTCTTAGGGCA TGGATTACTGGGCAGAGAAAAGATCAGTCACCTGGTACTAGGTCTGAAGTACCTGTTGTTCAGGTTGATCCGGTTTTCGA GGGAGTCGATGGTGGGGTTGGCAGCTTGGTGAAGTGGAACCCAGTTGCGAATGTCAAAGGCCACGATATATGGAGCTTCC TTAGGACCATGAATGTGCCTGTGAATTCATTGCATTCAAAAGGATACATCTCCATTGGCTGCGAGCCGTGCACGAGGGCT GTTTTACCCGGGCAACATGAACGGGAAGGTAGGTGGTGGTGGGAGGATGCCAAAGCTAAGGAGTGTGGTCTTCACAAAGG AAATGTGAAGCAGGATGCGGAGGCGGAGCTTAACGGCAATGGTGTTGCCAATACAAATGGCACTGCCACTGTCGCCGACA TCTTCAACACCCAGAATGTGGTCAGCTTGAGCAGGACTGGAATTGAGAATTTGACGAAGCTGGAGAACCGGAAAGAACCA TGGTTGGTTGTGCTTTATGCACCATGGTGCCCCTACTGCCAGGCTATGGAGGAATCTTATGTTGATCTGGCTGACAAGTT AGCAGAGTCAGGGGTGAAAGTTGGAAAATTTAGAGCGGATGGGGAGCAGAAAGAATTTGCAAAGCGGGAACTGGGGTTGG GGAGCTTCCCAACAATAATGTTTTTCCCTAAGCATTCATCTAGGCCAATAAAGTATCCCTCAGAAAACAGAGATGTTGAT TCCTTGATGGCGTTTGTGAATGCCTTAAGATGA
Download CDS Sequence

Protein sequence (LotjaGi4g1v0013600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MTISNKKNSHNKIEQFHIKIKLTLTPFNSMALAVTCSISISSSSSSSSTFQSSQPKFSQIASIRVSEIPHGGGVNASQRR SFVKPPQRSRDSIAPLAATIVASDVAETEQDNYQQLAVDLENASPLQIMDAALEKFGNHIAIAFSGAEDVALIEYARLTG RPFRVFSLDTGRLNPETYRFFDEVEKHYGIHIEYMFPDAVEVQGLVRSKGLFSFYEDGHQECCRVRKVRPLRRALKGLRA WITGQRKDQSPGTRSEVPVVQVDPVFEGVDGGVGSLVKWNPVANVKGHDIWSFLRTMNVPVNSLHSKGYISIGCEPCTRA VLPGQHEREGRWWWEDAKAKECGLHKGNVKQDAEAELNGNGVANTNGTATVADIFNTQNVVSLSRTGIENLTKLENRKEP WLVVLYAPWCPYCQAMEESYVDLADKLAESGVKVGKFRADGEQKEFAKRELGLGSFPTIMFFPKHSSRPIKYPSENRDVD SLMAFVNALR
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR46482:SF5
30 490 461 3.8E-261 –
TIGRFAM
TIGR00424
30 490 461 4.0E-258
IPR004508
PANTHER
PTHR46482
30 490 461 3.8E-261 –
Gene3D
G3DSA:3.40.50.620
112 335 224 2.1E-63
IPR014729
SUPERFAMILY
SSF52402
114 308 195 1.21E-42 –
CDD
cd01713
139 313 175 3.34663E-56
IPR002500
Pfam
PF01507
140 320 181 2.1E-43
IPR002500
ProSiteProfiles
PS51352
356 490 135 12.78
IPR013766
Gene3D
G3DSA:3.40.30.10
374 489 116 1.2E-20
IPR036249
SUPERFAMILY
SSF52833
378 487 110 3.38E-22
IPR036249
CDD
cd02993
379 486 108 1.12061E-64 –
Pfam
PF00085
393 487 95 4.3E-12
IPR013766
ProSitePatterns
PS00194
402 420 19 -
IPR017937
Coils
Coil
479 490 12 - –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003824
Molecular function Catalytic activity Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
Subterm of
GO:0016671
Molecular function Oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor Catalysis of an oxidation-reduction (redox) reaction in which a sulfur-containing group acts as a hydrogen or electron donor and reduces disulfide.
Subterm of
GO:0019419
Biological process Sulfate reduction The chemical reactions and pathways resulting in the reduction of sulfate to another sulfur-containing ion or compound such as hydrogen sulfide, adenosine-phosphosulfate (APS) or thiosulfate.
Subterm of
GO:0045454
Biological process Cell redox homeostasis Any process that maintains the redox environment of a cell or compartment within a cell.
Subterm of
GO:0055114
Biological process Oxidation-reduction process A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi4g1v0013600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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