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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR017937
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We have found 56 results. Now displaying 1 of 2 with 50 rows per page. This search has taken 5.802s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0090569.1
n.a. PREDICTED: probable nucleoredoxin 1-like [Glycine max] gi|356526803|ref|XP_003532006.1| chr0 37344501 37347612 -
2 domain predictions
1 GO term
Lj0g3v0095619.1
n.a. chloroplast thioredoxin M-type [Arachis hypogaea] gi|83776783|gb|ABC46707.1| chr0 40257156 40258577 -
2 domain predictions
1 GO term
Lj0g3v0282949.1
n.a. PREDICTED: thioredoxin M4, chloroplastic-like isoform X1 [Cicer arietinum] gi|502167294|ref|XP_004514101.1| chr0 146631933 146634156 +
2 domain predictions
1 GO term
Lj0g3v0286769.1
n.a. PREDICTED: thioredoxin M4, chloroplastic-like [Glycine max] gi|356546877|ref|XP_003541848.1| chr0 149007895 149010722 -
2 domain predictions
1 GO term
Lj1g3v0841310.1
n.a. protein disulfide isomerase-like protein precursor [Glycine max] gi|351722359|ref|NP_001238009.1| chr1 10855147 10858846 +
2 domain predictions
1 GO term
Lj1g3v1442770.1
n.a. Thioredoxin-like protein [Medicago truncatula] gi|357443639|ref|XP_003592097.1| chr1 17359949 17362192 -
2 domain predictions
1 GO term
Lj1g3v2533790.1
n.a. Thioredoxin H-type 9 [Medicago truncatula] gi|357477627|ref|XP_003609099.1| chr1 29039310 29042998 -
2 domain predictions
1 GO term
Lj1g3v2534950.1
n.a. PREDICTED: thioredoxin H9-like isoform X1 [Cicer arietinum] gi|502155500|ref|XP_004510093.1| chr1 29093658 29097816 -
2 domain predictions
1 GO term
Lj1g3v2838090.1
n.a. Thioredoxin [Medicago truncatula] gi|357507807|ref|XP_003624192.1| chr1 32262431 32266583 +
2 domain predictions
1 GO term
Lj1g3v2941830.1
n.a. thioredoxin [Arabidopsis thaliana] gi|21595244|gb|AAM66084.1| chr1 33366005 33367039 -
2 domain predictions
1 GO term
Lj1g3v4779530.1
n.a. PREDICTED: probable protein disulfide-isomerase A6-like isoform 1 [Glycine max] gi|356505777|ref|XP_003521666.1| chr1 57622391 57626321 -
2 domain predictions
1 GO term
Lj2g3v0912040.1
n.a. PREDICTED: thioredoxin-like 2, chloroplastic-like [Glycine max] gi|356497145|ref|XP_003517423.1| chr2 13989270 13994185 -
2 domain predictions
1 GO term
Lj2g3v0912040.2
n.a. PREDICTED: thioredoxin-like 2, chloroplastic-like [Glycine max] gi|356497145|ref|XP_003517423.1| chr2 13989270 13993138 -
2 domain predictions
1 GO term
Lj2g3v1349230.1
n.a. PREDICTED: thioredoxin H2-like [Cicer arietinum] gi|502093505|ref|XP_004489966.1| chr2 21203137 21203912 +
2 domain predictions
1 GO term
Lj2g3v1349340.1
n.a. PREDICTED: thioredoxin H7-like [Glycine max] gi|356498146|ref|XP_003517914.1| chr2 21225130 21226105 +
2 domain predictions
1 GO term
Lj2g3v1349350.1
n.a. PREDICTED: thioredoxin H2-like [Glycine max] gi|356567572|ref|XP_003551992.1| chr2 21229192 21230729 +
2 domain predictions
1 GO term
Lj2g3v1728790.1
n.a. PREDICTED: thioredoxin H-type-like [Cicer arietinum] gi|502161222|ref|XP_004512082.1| chr2 26540356 26542444 -
2 domain predictions
1 GO term
Lj2g3v2866110.1
n.a. protein disulfide isomerse like protein precursor [Glycine max] gi|351725315|ref|NP_001236576.1| chr2 37330426 37335848 -
2 domain predictions
1 GO term
Lj3g3v3085830.1
n.a. Protein disulfide isomerase L-2 [Medicago truncatula] gi|357472209|ref|XP_003606389.1| chr3 38703166 38709100 +
2 domain predictions
1 GO term
Lj3g3v3085830.2
n.a. Protein disulfide isomerase L-2 [Medicago truncatula] gi|357472209|ref|XP_003606389.1| chr3 38706296 38709100 +
2 domain predictions
1 GO term
Lj4g3v0149340.1
n.a. PREDICTED: 5'-adenylylsulfate reductase 3, chloroplastic-like [Glycine max] gi|356521997|ref|XP_003529636.1| chr4 1557709 1559903 -
2 domain predictions
1 GO term
Lj4g3v0230910.1
n.a. PREDICTED: thioredoxin O1, mitochondrial-like [Glycine max] gi|356512209|ref|XP_003524813.1| chr4 2840660 2843743 -
2 domain predictions
1 GO term
Lj4g3v0619960.1
n.a. PREDICTED: thioredoxin M3, chloroplastic-like [Cicer arietinum] gi|502143143|ref|XP_004505233.1| chr4 9377746 9380480 +
2 domain predictions
1 GO term
Lj4g3v3115170.1
n.a. PREDICTED: TPR repeat-containing thioredoxin TDX-like [Glycine max] gi|356524704|ref|XP_003530968.1| chr4 42247956 42252229 -
2 domain predictions
1 GO term
Lj4g3v3115170.2
n.a. PREDICTED: TPR repeat-containing thioredoxin TDX-like [Glycine max] gi|356524704|ref|XP_003530968.1| chr4 42247956 42251421 -
2 domain predictions
1 GO term
Lj5g3v1601820.1
n.a. protein disulfide isomerase-like protein precursor [Glycine max] gi|351724739|ref|NP_001236300.1| chr5 23250592 23255385 +
2 domain predictions
1 GO term
Lj5g3v1949680.1
n.a. Thioredoxin-like protein [Medicago truncatula] gi|357443639|ref|XP_003592097.1| chr5 27441189 27443432 +
2 domain predictions
1 GO term
Lj5g3v2166260.1
n.a. PREDICTED: sulfhydryl oxidase 1-like [Glycine max] gi|356536226|ref|XP_003536640.1| chr5 31024301 31029637 -
2 domain predictions
1 GO term
LotjaGi1g1v0068300.1
n.a. Protein disulfide isomerase family; TAIR: AT1G04980.1 PDI-like 2-2; Swiss-Prot: sp|Q67UF5|PDI23_ORYSJ Protein disulfide isomerase-like 2-3; TrEMBL-Plants: tr|I3SS06|I3SS06_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0068300 LjG1.1_chr1 9444881 9450710 +
2 domain predictions
1 GO term
LotjaGi1g1v0167700.1
n.a. Thioredoxin; TAIR: AT4G03520.1 Thioredoxin superfamily protein; Swiss-Prot: sp|P07591|TRXM_SPIOL Thioredoxin M-type, chloroplastic; TrEMBL-Plants: tr|I3SJS4|I3SJS4_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0167700 LjG1.1_chr1 31815951 31827038 +
2 domain predictions
1 GO term
LotjaGi1g1v0262100.1
n.a. Protein disulfide-isomerase; TAIR: AT1G77510.1 PDI-like 1-2; Swiss-Prot: sp|P29828|PDI_MEDSA Protein disulfide-isomerase; TrEMBL-Plants: tr|I7FST9|I7FST9_SOYBN Protein disulfide-isomerase; Found in the gene: LotjaGi1g1v0262100 LjG1.1_chr1 64183350 64187591 +
2 domain predictions
1 GO term
LotjaGi1g1v0458600.1
n.a. Thioredoxin; TAIR: AT3G08710.1 thioredoxin H-type 9; Swiss-Prot: sp|Q9C9Y6|TRXH9_ARATH Thioredoxin H9; TrEMBL-Plants: tr|I3S3D9|I3S3D9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0458600 LjG1.1_chr1 96204433 96209076 -
2 domain predictions
1 GO term
LotjaGi1g1v0486500.1
n.a. Thioredoxin; TAIR: AT5G16400.1 thioredoxin F2; Swiss-Prot: sp|P29450|TRXF_PEA Thioredoxin F-type, chloroplastic; TrEMBL-Plants: tr|I3T6W6|I3T6W6_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0486500 LjG1.1_chr1 99969475 99973388 +
2 domain predictions
1 GO term
LotjaGi1g1v0497800.1
n.a. Thioredoxin; TAIR: AT5G39950.1 thioredoxin 2; Swiss-Prot: sp|Q38879|TRXH2_ARATH Thioredoxin H2; TrEMBL-Plants: tr|I3S9I7|I3S9I7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0497800 LjG1.1_chr1 101359522 101362038 -
2 domain predictions
1 GO term
LotjaGi1g1v0747800.1
n.a. Protein disulfide isomerase-like protein; TAIR: AT2G47470.1 thioredoxin family protein; Swiss-Prot: sp|P38661|PDIA6_MEDSA Probable protein disulfide-isomerase A6; TrEMBL-Plants: tr|A0A0L9U914|A0A0L9U914_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0747800 LjG1.1_chr1 132044975 132048978 -
2 domain predictions
1 GO term
LotjaGi2g1v0233300.1
n.a. Thioredoxin; TAIR: AT4G29670.1 atypical CYS HIS rich thioredoxin 2; Swiss-Prot: sp|Q5TKD8|TRL2_ORYSJ Thioredoxin-like 2, chloroplastic; TrEMBL-Plants: tr|I1J4B6|I1J4B6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0233300 LjG1.1_chr2 69218244 69222591 -
2 domain predictions
1 GO term
LotjaGi2g1v0309700.1
n.a. Thioredoxin; TAIR: AT5G39950.1 thioredoxin 2; Swiss-Prot: sp|Q38879|TRXH2_ARATH Thioredoxin H2; TrEMBL-Plants: tr|A0A151TFZ4|A0A151TFZ4_CAJCA Thioredoxin H-type 2; Found in the gene: LotjaGi2g1v0309700 LjG1.1_chr2 78419055 78420286 +
2 domain predictions
1 GO term
LotjaGi2g1v0309900.1
n.a. Thioredoxin; TAIR: AT5G39950.1 thioredoxin 2; Swiss-Prot: sp|Q38879|TRXH2_ARATH Thioredoxin H2; TrEMBL-Plants: tr|I3S341|I3S341_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0309900 LjG1.1_chr2 78441148 78442132 +
2 domain predictions
1 GO term
LotjaGi2g1v0310000.1
n.a. Thioredoxin; TAIR: AT5G39950.1 thioredoxin 2; Swiss-Prot: sp|Q38879|TRXH2_ARATH Thioredoxin H2; TrEMBL-Plants: tr|A0A1J7GNW4|A0A1J7GNW4_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0310000 LjG1.1_chr2 78445382 78452937 +
2 domain predictions
1 GO term
LotjaGi2g1v0360200.1
n.a. Protein disulfide-isomerase; TAIR: AT5G60640.1 PDI-like 1-4; Swiss-Prot: sp|Q9FF55|PDI14_ARATH Protein disulfide isomerase-like 1-4; TrEMBL-Plants: tr|G7JPD1|G7JPD1_MEDTR Protein disulfide-isomerase; Found in the gene: LotjaGi2g1v0360200 LjG1.1_chr2 85772733 85791008 +
2 domain predictions
1 GO term
LotjaGi2g1v0385800.1
n.a. Thioredoxin; TAIR: AT3G51030.1 thioredoxin H-type 1; Swiss-Prot: sp|Q43636|TRXH_RICCO Thioredoxin H-type; TrEMBL-Plants: tr|I3S0R6|I3S0R6_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0385800 LjG1.1_chr2 88171611 88178901 -
2 domain predictions
1 GO term
LotjaGi3g1v0048000.1
n.a. Thioredoxin; TAIR: AT3G15360.1 thioredoxin M-type 4; Swiss-Prot: sp|Q9SEU6|TRXM4_ARATH Thioredoxin M4, chloroplastic; TrEMBL-Plants: tr|A0A151S239|A0A151S239_CAJCA Uncharacterized protein; Found in the gene: LotjaGi3g1v0048000 LjG1.1_chr3 5096065 5098692 +
2 domain predictions
1 GO term
LotjaGi3g1v0051900.1
n.a. Thioredoxin; TAIR: AT3G08710.1 thioredoxin H-type 9; Swiss-Prot: sp|P85801|TRXH_POPJC Thioredoxin H-type; TrEMBL-Plants: tr|I1JJZ5|I1JJZ5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0051900 LjG1.1_chr3 5456420 5460882 -
2 domain predictions
1 GO term
LotjaGi3g1v0051900.2
n.a. Thioredoxin; TAIR: AT3G08710.1 thioredoxin H-type 9; Swiss-Prot: sp|P85801|TRXH_POPJC Thioredoxin H-type; TrEMBL-Plants: tr|I1JJZ5|I1JJZ5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0051900 LjG1.1_chr3 5456555 5458386 -
2 domain predictions
1 GO term
LotjaGi3g1v0162500.1
n.a. Protein disulfide-isomerase; TAIR: AT5G60640.1 PDI-like 1-4; Swiss-Prot: sp|Q9FF55|PDI14_ARATH Protein disulfide isomerase-like 1-4; TrEMBL-Plants: tr|A0A0R0HDA3|A0A0R0HDA3_SOYBN Protein disulfide-isomerase; Found in the gene: LotjaGi3g1v0162500 LjG1.1_chr3 22106176 22110301 -
2 domain predictions
1 GO term
LotjaGi3g1v0268600.1
n.a. Thioredoxin; TAIR: AT3G15360.1 thioredoxin M-type 4; Swiss-Prot: sp|Q9SEU6|TRXM4_ARATH Thioredoxin M4, chloroplastic; TrEMBL-Plants: tr|A0A1J7HXK2|A0A1J7HXK2_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0268600 LjG1.1_chr3 51596474 51599898 +
2 domain predictions
1 GO term
LotjaGi4g1v0013600.1
n.a. 5'-adenylylsulfate reductase; TAIR: AT4G21990.1 APS reductase 3; Swiss-Prot: sp|P92980|APR3_ARATH 5'-adenylylsulfate reductase 3, chloroplastic; TrEMBL-Plants: tr|I3S182|I3S182_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0013600 LjG1.1_chr4 1711374 1715513 -
2 domain predictions
1 GO term
LotjaGi4g1v0021100.1
n.a. Thioredoxin; TAIR: AT2G35010.1 thioredoxin O1; Swiss-Prot: sp|O64764|TRXO1_ARATH Thioredoxin O1, mitochondrial; TrEMBL-Plants: tr|I3S832|I3S832_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0021100 LjG1.1_chr4 2598692 2602193 -
2 domain predictions
1 GO term
LotjaGi4g1v0075300.1
n.a. Thioredoxin; TAIR: AT2G15570.1 Thioredoxin superfamily protein; Swiss-Prot: sp|Q9SEU7|TRXM3_ARATH Thioredoxin M3, chloroplastic; TrEMBL-Plants: tr|I3TAH0|I3TAH0_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0075300 LjG1.1_chr4 9657520 9661115 +
2 domain predictions
1 GO term
LotjaGi4g1v0167100.1
n.a. Thioredoxin; TAIR: AT1G60420.1 DC1 domain-containing protein; Swiss-Prot: sp|O80763|NRX1_ARATH Probable nucleoredoxin 1; TrEMBL-Plants: tr|I1KXE7|I1KXE7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0167100 LjG1.1_chr4 31826786 31836734 -
2 domain predictions
1 GO term